RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 UTP20O75691 2785 aaKnown RBP22.31■■□□□ 1.16
LSM6-202ENST00000502781 GPR171O14626 319 aa22.31■■□□□ 1.16
LSM6-202ENST00000502781 GSC2O15499 205 aa22.31■■□□□ 1.16
LSM6-202ENST00000502781 SMNDC1O75940 238 aaKnown RBP eCLIP22.31■■□□□ 1.16
LSM6-202ENST00000502781 GRPRP30550 384 aa22.31■■□□□ 1.16
LSM6-202ENST00000502781 IFNA8P32881 189 aa22.31■■□□□ 1.16
LSM6-202ENST00000502781 RASSF2P50749 326 aa22.31■■□□□ 1.16
LSM6-202ENST00000502781 TRAP1Q12931 704 aaKnown RBP22.31■■□□□ 1.16
LSM6-202ENST00000502781 SP5Q6BEB4 398 aaPredicted RBP22.31■■□□□ 1.16
LSM6-202ENST00000502781 ZNF610Q8N9Z0 462 aa22.31■■□□□ 1.16
LSM6-202ENST00000502781 ADPRHL1Q8NDY3 354 aa22.31■■□□□ 1.16
LSM6-202ENST00000502781 TMEM255BQ8WV15 326 aa22.31■■□□□ 1.16
LSM6-202ENST00000502781 CCDC124Q96CT7 223 aaKnown RBP22.31■■□□□ 1.16
LSM6-202ENST00000502781 MOGAT1Q96PD6 335 aa22.31■■□□□ 1.16
LSM6-202ENST00000502781 CADM1Q9BY67 442 aaKnown RBP22.31■■□□□ 1.16
LSM6-202ENST00000502781 EMC3Q9P0I2 261 aa22.31■■□□□ 1.16
LSM6-202ENST00000502781 SEC14L4Q9UDX3 406 aa22.31■■□□□ 1.16
LSM6-202ENST00000502781 B3GALT5Q9Y2C3 310 aa22.31■■□□□ 1.16
LSM6-202ENST00000502781 HCFC1P51610 2035 aa22.31■■□□□ 1.16
LSM6-202ENST00000502781 ADGRG4Q8IZF6 3080 aa22.31■■□□□ 1.16
LSM6-202ENST00000502781 M0R082 166 aa22.3■■□□□ 1.16
LSM6-202ENST00000502781 MT-ATP6P00846 226 aa22.3■■□□□ 1.16
LSM6-202ENST00000502781 RHCEP18577 417 aa22.3■■□□□ 1.16
LSM6-202ENST00000502781 COL8A1P27658 744 aa22.3■■□□□ 1.16
LSM6-202ENST00000502781 NTF4P34130 210 aa22.3■■□□□ 1.16
LSM6-202ENST00000502781 UGT2B15P54855 530 aa22.3■■□□□ 1.16
LSM6-202ENST00000502781 POU4F3Q15319 338 aa22.3■■□□□ 1.16
LSM6-202ENST00000502781 GALNT5Q7Z7M9 940 aa22.3■■□□□ 1.16
LSM6-202ENST00000502781 SCAIQ8N9R8 606 aa22.3■■□□□ 1.16
LSM6-202ENST00000502781 PIK3C3Q8NEB9 887 aa22.3■■□□□ 1.16
LSM6-202ENST00000502781 ZNF417Q8TAU3 575 aa22.3■■□□□ 1.16
LSM6-202ENST00000502781 TMEM239Q8WW34 195 aa22.3■■□□□ 1.16
LSM6-202ENST00000502781 ZNF587Q96SQ5 575 aaPredicted RBP22.3■■□□□ 1.16
LSM6-202ENST00000502781 FNDC11Q9BVV2 318 aa22.3■■□□□ 1.16
LSM6-202ENST00000502781 RBM24Q9BX46 236 aaKnown RBP22.3■■□□□ 1.16
LSM6-202ENST00000502781 ANKRD19PQ9H560 264 aa22.3■■□□□ 1.16
LSM6-202ENST00000502781 RASD1Q9Y272 281 aa22.3■■□□□ 1.16
LSM6-202ENST00000502781 FLVCR1Q9Y5Y0 555 aa22.3■■□□□ 1.16
LSM6-202ENST00000502781 V9GYQ6 96 aa22.3■■□□□ 1.16
LSM6-202ENST00000502781 LRRN3E7EW58 273 aa22.29■■□□□ 1.16
LSM6-202ENST00000502781 MT-ND1P03886 318 aa22.29■■□□□ 1.16
LSM6-202ENST00000502781 TRAM2Q15035 370 aa22.29■■□□□ 1.16
LSM6-202ENST00000502781 ZNF74Q16587 644 aa22.29■■□□□ 1.16
LSM6-202ENST00000502781 TFAP2EQ6VUC0 442 aa22.29■■□□□ 1.16
LSM6-202ENST00000502781 H1FNTQ75WM6 255 aaPredicted RBP22.29■■□□□ 1.16
LSM6-202ENST00000502781 CYP4Z1Q86W10 505 aa22.29■■□□□ 1.16
LSM6-202ENST00000502781 ZIC4Q8N9L1 334 aa22.29■■□□□ 1.16
LSM6-202ENST00000502781 ZNF775Q96BV0 537 aaPredicted RBP22.29■■□□□ 1.16
LSM6-202ENST00000502781 LRRC46Q96FV0 321 aa22.29■■□□□ 1.16
LSM6-202ENST00000502781 SPOCK3Q9BQ16 436 aa22.29■■□□□ 1.16
LSM6-202ENST00000502781 NMNAT1Q9HAN9 279 aaPredicted RBP22.29■■□□□ 1.16
LSM6-202ENST00000502781 IL1RAPQ9NPH3 570 aa22.29■■□□□ 1.16
LSM6-202ENST00000502781 GALNT8Q9NY28 637 aa22.29■■□□□ 1.16
LSM6-202ENST00000502781 B3GAT1Q9P2W7 334 aa22.29■■□□□ 1.16
LSM6-202ENST00000502781 RHCGQ9UBD6 479 aa22.29■■□□□ 1.16
LSM6-202ENST00000502781 LOC102725191A0A1B0GVB3 256 aa22.28■■□□□ 1.16
LSM6-202ENST00000502781 GTF2E2P29084 291 aaKnown RBP22.28■■□□□ 1.16
LSM6-202ENST00000502781 OR3A2P47893 321 aa22.28■■□□□ 1.16
LSM6-202ENST00000502781 TMEM225Q6GV28 225 aa22.28■■□□□ 1.16
LSM6-202ENST00000502781 OR9K2Q8NGE7 335 aa22.28■■□□□ 1.16
LSM6-202ENST00000502781 POP5Q969H6 163 aaKnown RBP22.28■■□□□ 1.16
LSM6-202ENST00000502781 DHRS1Q96LJ7 313 aa22.28■■□□□ 1.16
LSM6-202ENST00000502781 KLHL4Q9C0H6 718 aa22.28■■□□□ 1.16
LSM6-202ENST00000502781 LRMDAQ9H2I8 198 aa22.28■■□□□ 1.16
LSM6-202ENST00000502781 C12orf49Q9H741 205 aa22.28■■□□□ 1.16
LSM6-202ENST00000502781 MRPL39Q9NYK5 338 aaKnown RBP22.28■■□□□ 1.16
LSM6-202ENST00000502781 PKDREJQ9NTG1 2253 aa22.28■■□□□ 1.16
LSM6-202ENST00000502781 hCG_2039718K7EN88 272 aa22.27■■□□□ 1.16
LSM6-202ENST00000502781 KPNA4O00629 521 aaPredicted RBP22.27■■□□□ 1.16
LSM6-202ENST00000502781 ITGA2P17301 1181 aa22.27■■□□□ 1.16
LSM6-202ENST00000502781 EDNRAP25101 427 aa22.27■■□□□ 1.16
LSM6-202ENST00000502781 SLC46A3Q7Z3Q1 461 aa22.27■■□□□ 1.16
LSM6-202ENST00000502781 PFN4Q8NHR9 129 aa22.27■■□□□ 1.16
LSM6-202ENST00000502781 TMEM45BQ96B21 275 aa22.27■■□□□ 1.16
LSM6-202ENST00000502781 FKRPQ9H9S5 495 aa22.27■■□□□ 1.16
LSM6-202ENST00000502781 ELOVL5Q9NYP7 299 aa22.27■■□□□ 1.16
LSM6-202ENST00000502781 NOSIPQ9Y314 301 aaKnown RBP22.27■■□□□ 1.16
LSM6-202ENST00000502781 FAM32AQ9Y421 112 aaKnown RBP22.27■■□□□ 1.16
LSM6-202ENST00000502781 ANKHD1Q8IWZ3 2542 aaKnown RBP22.27■■□□□ 1.16
LSM6-202ENST00000502781 A0A1W2PRQ8 180 aa22.26■■□□□ 1.15
LSM6-202ENST00000502781 HTR3EA5X5Y0 456 aa22.26■■□□□ 1.15
LSM6-202ENST00000502781 ENO4A6NNW6 628 aa22.26■■□□□ 1.15
LSM6-202ENST00000502781 CH25HO95992 272 aa22.26■■□□□ 1.15
LSM6-202ENST00000502781 CBLP22681 906 aa22.26■■□□□ 1.15
LSM6-202ENST00000502781 UQCRC1P31930 480 aa22.26■■□□□ 1.15
LSM6-202ENST00000502781 MAGEA2P43356 314 aa22.26■■□□□ 1.15
LSM6-202ENST00000502781 LSM11P83369 360 aaKnown RBP eCLIP22.26■■□□□ 1.15
LSM6-202ENST00000502781 SORDQ00796 357 aa22.26■■□□□ 1.15
LSM6-202ENST00000502781 DGCR6Q14129 220 aa22.26■■□□□ 1.15
LSM6-202ENST00000502781 HIST2H2BCQ6DN03 193 aa22.26■■□□□ 1.15
LSM6-202ENST00000502781 PIWIL3Q7Z3Z3 882 aaKnown RBP22.26■■□□□ 1.15
LSM6-202ENST00000502781 GPAT4Q86UL3 456 aa22.26■■□□□ 1.15
LSM6-202ENST00000502781 DMRTC2Q8IXT2 367 aaPredicted RBP22.26■■□□□ 1.15
LSM6-202ENST00000502781 LIPHQ8WWY8 451 aa22.26■■□□□ 1.15
LSM6-202ENST00000502781 ACOT11Q8WXI4 607 aaPredicted RBP22.26■■□□□ 1.15
LSM6-202ENST00000502781 OXGR1Q96P68 337 aa22.26■■□□□ 1.15
LSM6-202ENST00000502781 PIP5K1AQ99755 562 aa22.26■■□□□ 1.15
LSM6-202ENST00000502781 ASPNQ9BXN1 380 aa22.26■■□□□ 1.15
LSM6-202ENST00000502781 FANCFQ9NPI8 374 aa22.26■■□□□ 1.15
LSM6-202ENST00000502781 C20orf141Q9NUB4 165 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms