RNA–Protein interactions for RNA: ENST00000502751.5

LMNA-219, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-219ENST00000502751 CCL19Q99731 98 aa14.56□□□□□ -0.08
LMNA-219ENST00000502751 ARHGDIGQ99819 225 aa14.56□□□□□ -0.08
LMNA-219ENST00000502751 OR11A1Q9GZK7 315 aa14.56□□□□□ -0.08
LMNA-219ENST00000502751 ALG2Q9H553 416 aa14.56□□□□□ -0.08
LMNA-219ENST00000502751 EMC3Q9P0I2 261 aa14.56□□□□□ -0.08
LMNA-219ENST00000502751 A0A1B0GWA3 101 aa14.55□□□□□ -0.08
LMNA-219ENST00000502751 GMNNO75496 209 aa14.55□□□□□ -0.08
LMNA-219ENST00000502751 AHSA1O95433 338 aa14.55□□□□□ -0.08
LMNA-219ENST00000502751 IL32P24001 234 aa14.55□□□□□ -0.08
LMNA-219ENST00000502751 KDELR2P33947 212 aa14.55□□□□□ -0.08
LMNA-219ENST00000502751 PDK3Q15120 406 aa14.55□□□□□ -0.08
LMNA-219ENST00000502751 TAB1Q15750 504 aa14.55□□□□□ -0.08
LMNA-219ENST00000502751 NRF1Q16656 503 aa14.55□□□□□ -0.08
LMNA-219ENST00000502751 ZNF613Q6PF04 617 aa14.55□□□□□ -0.08
LMNA-219ENST00000502751 P3H2Q8IVL5 708 aa14.55□□□□□ -0.08
LMNA-219ENST00000502751 RNF217Q8TC41 542 aa14.55□□□□□ -0.08
LMNA-219ENST00000502751 IGFBPL1Q8WX77 278 aa14.55□□□□□ -0.08
LMNA-219ENST00000502751 KISS1RQ969F8 398 aaPredicted RBP14.55□□□□□ -0.08
LMNA-219ENST00000502751 MCHR1Q99705 422 aa14.55□□□□□ -0.08
LMNA-219ENST00000502751 DSCAMO60469 2012 aa14.54□□□□□ -0.08
LMNA-219ENST00000502751 IGKV3D-15A0A087WSY6 115 aa14.54□□□□□ -0.08
LMNA-219ENST00000502751 NME4O00746 187 aa14.54□□□□□ -0.08
LMNA-219ENST00000502751 GPR171O14626 319 aa14.54□□□□□ -0.08
LMNA-219ENST00000502751 ARHGEF9O43307 516 aa14.54□□□□□ -0.08
LMNA-219ENST00000502751 OR2T1O43869 369 aa14.54□□□□□ -0.08
LMNA-219ENST00000502751 CD247P20963 164 aa14.54□□□□□ -0.08
LMNA-219ENST00000502751 HTR2AP28223 471 aa14.54□□□□□ -0.08
LMNA-219ENST00000502751 GTF2E2P29084 291 aaKnown RBP14.54□□□□□ -0.08
LMNA-219ENST00000502751 NTF4P34130 210 aa14.54□□□□□ -0.08
LMNA-219ENST00000502751 MXRA7P84157 204 aa14.54□□□□□ -0.08
LMNA-219ENST00000502751 KRT72Q14CN4 511 aa14.54□□□□□ -0.08
LMNA-219ENST00000502751 OR1Q1Q15612 314 aa14.54□□□□□ -0.08
LMNA-219ENST00000502751 LRRC23Q53EV4 343 aaPredicted RBP14.54□□□□□ -0.08
LMNA-219ENST00000502751 C1orf140Q5VVS0 124 aa14.54□□□□□ -0.08
LMNA-219ENST00000502751 ABLIM2Q6H8Q1 611 aa14.54□□□□□ -0.08
LMNA-219ENST00000502751 C16orf89Q6UX73 402 aa14.54□□□□□ -0.08
LMNA-219ENST00000502751 BHLHA15Q7RTS1 189 aaPredicted RBP14.54□□□□□ -0.08
LMNA-219ENST00000502751 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.54□□□□□ -0.08
LMNA-219ENST00000502751 GALNT5Q7Z7M9 940 aa14.54□□□□□ -0.08
LMNA-219ENST00000502751 GPR32P1Q8NGA4 272 aa14.54□□□□□ -0.08
LMNA-219ENST00000502751 LILRB1Q8NHL6 650 aaPredicted RBP14.54□□□□□ -0.08
LMNA-219ENST00000502751 C18orf12Q96KH6 178 aa14.54□□□□□ -0.08
LMNA-219ENST00000502751 EPYCQ99645 322 aa14.54□□□□□ -0.08
LMNA-219ENST00000502751 KCTD14Q9BQ13 255 aaPredicted RBP14.54□□□□□ -0.08
LMNA-219ENST00000502751 USB1Q9BQ65 265 aaKnown RBP14.54□□□□□ -0.08
LMNA-219ENST00000502751 ADPRHL2Q9NX46 363 aa14.54□□□□□ -0.08
LMNA-219ENST00000502751 ADA2Q9NZK5 511 aa14.54□□□□□ -0.08
LMNA-219ENST00000502751 ABCD2Q9UBJ2 740 aa14.54□□□□□ -0.08
LMNA-219ENST00000502751 NIPBLQ6KC79 2804 aaeCLIP14.53□□□□□ -0.085e-6■■■■□ 20.4
LMNA-219ENST00000502751 A0A0B4J2E0 115 aa14.53□□□□□ -0.08
LMNA-219ENST00000502751 A0A1B0GX12 115 aa14.53□□□□□ -0.08
LMNA-219ENST00000502751 ZC3H12DA2A288 527 aaKnown RBP14.53□□□□□ -0.08
LMNA-219ENST00000502751 ZNF716A6NP11 495 aa14.53□□□□□ -0.08
LMNA-219ENST00000502751 TMEM229AB2RXF0 380 aa14.53□□□□□ -0.08
LMNA-219ENST00000502751 M0R3H8 397 aa14.53□□□□□ -0.08
LMNA-219ENST00000502751 CXCR6O00574 342 aa14.53□□□□□ -0.08
LMNA-219ENST00000502751 RAMP1O60894 148 aa14.53□□□□□ -0.08
LMNA-219ENST00000502751 IGHV1-2P23083 117 aa14.53□□□□□ -0.08
LMNA-219ENST00000502751 IFNA8P32881 189 aa14.53□□□□□ -0.08
LMNA-219ENST00000502751 GSK3BP49841 420 aa14.53□□□□□ -0.08
LMNA-219ENST00000502751 H3F3AP84243 136 aa14.53□□□□□ -0.08
LMNA-219ENST00000502751 BNIP2Q12982 314 aa14.53□□□□□ -0.08
LMNA-219ENST00000502751 CEACAM7Q14002 265 aa14.53□□□□□ -0.08
LMNA-219ENST00000502751 OR7A5Q15622 319 aa14.53□□□□□ -0.08
LMNA-219ENST00000502751 CYBRD1Q53TN4 286 aa14.53□□□□□ -0.08
LMNA-219ENST00000502751 Q5PR19 223 aa14.53□□□□□ -0.08
LMNA-219ENST00000502751 NCMAPQ5T1S8 102 aa14.53□□□□□ -0.08
LMNA-219ENST00000502751 PAQR6Q6TCH4 344 aa14.53□□□□□ -0.08
LMNA-219ENST00000502751 PRSS57Q6UWY2 283 aa14.53□□□□□ -0.08
LMNA-219ENST00000502751 SEZ6L2Q6UXD5 910 aa14.53□□□□□ -0.08
LMNA-219ENST00000502751 COMTD1Q86VU5 262 aa14.53□□□□□ -0.08
LMNA-219ENST00000502751 CCDC103Q8IW40 242 aa14.53□□□□□ -0.08
LMNA-219ENST00000502751 ZNF100Q8IYN0 542 aa14.53□□□□□ -0.08
LMNA-219ENST00000502751 PGAM4Q8N0Y7 254 aa14.53□□□□□ -0.08
LMNA-219ENST00000502751 OR6T1Q8NGN1 323 aa14.53□□□□□ -0.08
LMNA-219ENST00000502751 VANGL1Q8TAA9 524 aaPredicted RBP14.53□□□□□ -0.08
LMNA-219ENST00000502751 SLC38A4Q969I6 547 aa14.53□□□□□ -0.08
LMNA-219ENST00000502751 SMR3AQ99954 134 aa14.53□□□□□ -0.08
LMNA-219ENST00000502751 RSPO3Q9BXY4 272 aaPredicted RBP14.53□□□□□ -0.08
LMNA-219ENST00000502751 POLR2J2Q9GZM3 115 aaKnown RBP14.53□□□□□ -0.08
LMNA-219ENST00000502751 POLR2J3Q9H1A7 115 aaKnown RBP14.53□□□□□ -0.08
LMNA-219ENST00000502751 SH3GLB1Q9Y371 365 aa14.53□□□□□ -0.08
LMNA-219ENST00000502751 RAI1Q7Z5J4 1906 aaPredicted RBP14.53□□□□□ -0.08
LMNA-219ENST00000502751 LIPT2A6NK58 231 aa14.52□□□□□ -0.09
LMNA-219ENST00000502751 HS3ST1O14792 307 aa14.52□□□□□ -0.09
LMNA-219ENST00000502751 NPIPB7O75200 414 aa14.52□□□□□ -0.09
LMNA-219ENST00000502751 LYZL6O75951 148 aa14.52□□□□□ -0.09
LMNA-219ENST00000502751 VAMP5O95183 116 aa14.52□□□□□ -0.09
LMNA-219ENST00000502751 CNOT4O95628 575 aaKnown RBP14.52□□□□□ -0.09
LMNA-219ENST00000502751 IMPDH2P12268 514 aa14.52□□□□□ -0.09
LMNA-219ENST00000502751 SELENOWP63302 87 aa14.52□□□□□ -0.09
LMNA-219ENST00000502751 MFSD13AQ14CX5 517 aa14.52□□□□□ -0.09
LMNA-219ENST00000502751 ZNF611Q8N823 705 aa14.52□□□□□ -0.09
LMNA-219ENST00000502751 MFSD8Q8NHS3 518 aa14.52□□□□□ -0.09
LMNA-219ENST00000502751 BCAS4Q8TDM0 211 aa14.52□□□□□ -0.09
LMNA-219ENST00000502751 AKAP1Q92667 903 aaKnown RBP eCLIP14.52□□□□□ -0.09
LMNA-219ENST00000502751 PERPQ96FX8 193 aa14.52□□□□□ -0.09
LMNA-219ENST00000502751 ARL8BQ9NVJ2 186 aa14.52□□□□□ -0.09
LMNA-219ENST00000502751 USP22Q9UPT9 525 aa14.52□□□□□ -0.09
LMNA-219ENST00000502751 USF3Q68DE3 2245 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms