RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 TIMP4Q99727 224 aa4.46□□□□□ -1.69
NEAT1-202ENST00000501122 PLEKHA3Q9HB20 300 aa4.46□□□□□ -1.69
NEAT1-202ENST00000501122 KCNK7Q9Y2U2 307 aa4.46□□□□□ -1.69
NEAT1-202ENST00000501122 KCNAB3O43448 404 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 KNG1P01042 644 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 TCL1AP56279 114 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 LDLRAD2Q5SZI1 272 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 OVCH1Q7RTY7 1134 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 CWH43Q9H720 699 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 TMEM184BQ9Y519 407 aaPredicted RBP4.46□□□□□ -1.7
NEAT1-202ENST00000501122 SOX2P48431 317 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 ECH1Q13011 328 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 HERPUD1Q15011 391 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 SLC5A8Q8N695 610 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 TMEM251Q8N6I4 163 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 OR10P1Q8NGE3 313 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 SYNPRQ8TBG9 265 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 C3orf30Q96M34 536 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 ANKRD20A5PA0PJZ0 165 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 ANXA4P09525 319 aaPredicted RBP4.46□□□□□ -1.7
NEAT1-202ENST00000501122 NPY5RQ15761 445 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 LRP11Q86VZ4 500 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 RBMXL3Q8N7X1 1067 aaKnown RBP4.46□□□□□ -1.7
NEAT1-202ENST00000501122 ZMIZ2Q8NF64 920 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 SPRYD4Q8WW59 207 aaPredicted RBP4.46□□□□□ -1.7
NEAT1-202ENST00000501122 OR5M11Q96RB7 305 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 MARVELD1Q9BSK0 173 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 MRPL37Q9BZE1 423 aaKnown RBP4.46□□□□□ -1.7
NEAT1-202ENST00000501122 MEGF9Q9H1U4 602 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 TUSC3Q13454 348 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 TAAR9Q96RI9 348 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 ATP5SQ99766 215 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 PIGVQ9NUD9 493 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 CPSF1Q10570 1443 aaKnown RBP4.46□□□□□ -1.7
NEAT1-202ENST00000501122 A0A1W2PN81 502 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 SAP18O00422 153 aaKnown RBP4.46□□□□□ -1.7
NEAT1-202ENST00000501122 CHRNA7P36544 502 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 SV2CQ496J9 727 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 APOBEC3HQ6NTF7 200 aaKnown RBP4.46□□□□□ -1.7
NEAT1-202ENST00000501122 OR14L1PQ8NHC6 308 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 IL31RAQ8NI17 732 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 ISOC2Q96AB3 205 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 WDR89Q96FK6 387 aaPredicted RBP4.46□□□□□ -1.7
NEAT1-202ENST00000501122 RAB18Q9NP72 206 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 CLCF1Q9UBD9 225 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 MEIS3P1A6NDR6 274 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 OTOL1A6NHN0 477 aaPredicted RBP4.46□□□□□ -1.7
NEAT1-202ENST00000501122 H3BQ06 376 aaPredicted RBP4.46□□□□□ -1.7
NEAT1-202ENST00000501122 ZNF264O43296 627 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 SCN2BO60939 215 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 NOVA1P51513 510 aaKnown RBP4.46□□□□□ -1.7
NEAT1-202ENST00000501122 SCAND1P57086 179 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 MFSD14BQ5SR56 506 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 FCRLAQ7L513 359 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 EID2Q8N6I1 236 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 DCAF13Q9NV06 445 aaKnown RBP4.46□□□□□ -1.7
NEAT1-202ENST00000501122 SPATA31A6Q5VVP1 1343 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 BCL2L11O43521 198 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 RNH1P13489 461 aaKnown RBP4.46□□□□□ -1.7
NEAT1-202ENST00000501122 PIN1Q13526 163 aaPredicted RBP4.46□□□□□ -1.7
NEAT1-202ENST00000501122 TEAD2Q15562 447 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 P2RY11Q96G91 374 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 TMEM176AQ96HP8 235 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 GINS3Q9BRX5 216 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 SRMSQ9H3Y6 488 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 MTHFD2LQ9H903 347 aaPredicted RBP4.46□□□□□ -1.7
NEAT1-202ENST00000501122 OBP2BQ9NPH6 170 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 OBP2AQ9NY56 170 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 V9GY05 133 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 HLA-DOBP13765 273 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 MPGP29372 298 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 GABRA5P31644 462 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 KDELR2P33947 212 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 GPR12P47775 334 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 NUBP1P53384 320 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 GP2P55259 537 aaKnown RBP4.46□□□□□ -1.7
NEAT1-202ENST00000501122 IRF9Q00978 393 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 CELF3Q5SZQ8 465 aaKnown RBP4.46□□□□□ -1.7
NEAT1-202ENST00000501122 ZSCAN4Q8NAM6 433 aaPredicted RBP4.46□□□□□ -1.7
NEAT1-202ENST00000501122 OR51G2Q8NGK0 314 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 GPR88Q9GZN0 384 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 EIF4G1Q04637 1599 aaKnown RBP4.46□□□□□ -1.7
NEAT1-202ENST00000501122 TMX2-CTNND1H3BSU7 103 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 CLDN34H7C241 214 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 ARPC3O15145 178 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 DLEU1O43261 78 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 LRG1P02750 347 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 OR4D2P58180 307 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 ZNF776Q68DI1 518 aaPredicted RBP4.46□□□□□ -1.7
NEAT1-202ENST00000501122 TMEM150AQ86TG1 271 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 MYPOPQ86VE0 399 aaPredicted RBP4.46□□□□□ -1.7
NEAT1-202ENST00000501122 IGDCC3Q8IVU1 814 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 DNASE2BQ8WZ79 361 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 FBXO34Q9NWN3 711 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 IL20RAQ9UHF4 553 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 HNRNPA1P09651 372 aaKnown RBP eCLIP4.46□□□□□ -1.78e-15■■■□□ 16.4
NEAT1-202ENST00000501122 HIST1H1BP16401 226 aaKnown RBP4.46□□□□□ -1.7
NEAT1-202ENST00000501122 TACR3P29371 465 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 PAFAH1B2P68402 229 aa4.46□□□□□ -1.7
NEAT1-202ENST00000501122 HLA-BQ31612 363 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms