RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 TIFABQ6ZNK6 161 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 Q6ZSR9 355 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 FRMD7Q6ZUT3 714 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 IKBIPQ70UQ0 350 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 ZNF572Q7Z3I7 529 aaPredicted RBP4.83□□□□□ -1.64
SPTA1-209ENST00000498708 MISPQ8IVT2 679 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 GSPT2Q8IYD1 628 aaKnown RBP4.83□□□□□ -1.64
SPTA1-209ENST00000498708 FBXL14Q8N1E6 418 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 CLEC4FQ8N1N0 589 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 LILRB2Q8N423 598 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 CELF2-AS1Q8N7Q2 184 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 BVESQ8NE79 360 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 OR7A2PQ8NGA2 310 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 OR5D16Q8NGK9 328 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 OR5AK3PQ8NH89 298 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 AGR3Q8TD06 166 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 GPR119Q8TDV5 335 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 ACTRT2Q8TDY3 377 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 C16orf45Q96MC5 204 aaPredicted RBP4.83□□□□□ -1.64
SPTA1-209ENST00000498708 C1orf50Q9BV19 199 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 THUMPD3Q9BV44 507 aaKnown RBP4.83□□□□□ -1.64
SPTA1-209ENST00000498708 RBM4Q9BWF3 364 aaKnown RBP4.83□□□□□ -1.64
SPTA1-209ENST00000498708 BTBD2Q9BX70 525 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 PIGUQ9H490 435 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 FAIMQ9NVQ4 179 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 ZNF446Q9NWS9 450 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 C1orf109Q9NX04 203 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 MED29Q9NX70 200 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.83□□□□□ -1.64
SPTA1-209ENST00000498708 KLHL9Q9P2J3 617 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 DCDC2Q9UHG0 476 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 ICAM5Q9UMF0 924 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 TRAF6Q9Y4K3 522 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 CCL27Q9Y4X3 112 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 GMEB1Q9Y692 573 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 PCLOQ9Y6V0 5065 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 A0A0B4J203 849 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 CENPVL1A0A0U1RR11 272 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 LRP5LA4QPB2 252 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 GJE1A6NN92 205 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 TMEM233B4DJY2 109 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 C22orf46C9J442 243 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 H3BNH8 94 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 SULT2B1O00204 365 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 PIP5K1BO14986 540 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 ZNF264O43296 627 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 RIPK2O43353 540 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 PEX11AO75192 247 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 NGFRP08138 427 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 RPSAP08865 295 aaKnown RBP4.82□□□□□ -1.64
SPTA1-209ENST00000498708 FAM153BP0C7A2 387 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 LAMP1P11279 417 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 UBL4AP11441 157 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 CPA3P15088 417 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 RPS2P15880 293 aaKnown RBP4.82□□□□□ -1.64
SPTA1-209ENST00000498708 DDX5P17844 614 aaKnown RBP4.82□□□□□ -1.64
SPTA1-209ENST00000498708 CDH2P19022 906 aaPredicted RBP4.82□□□□□ -1.64
SPTA1-209ENST00000498708 ELK4P28324 431 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 IL2RGP31785 369 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 RYKP34925 604 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 GNALP38405 381 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 NR4A2P43354 598 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 CCT3P49368 545 aaKnown RBP4.82□□□□□ -1.64
SPTA1-209ENST00000498708 ATP12AP54707 1039 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 HILS1P60008 231 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 RAC3P60763 192 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 MERTKQ12866 999 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 SELENBP1Q13228 472 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 CBFBQ13951 182 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 FAM153CQ494X1 144 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 ARMC4Q5T2S8 1044 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 PDZK1Q5T2W1 519 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 FIP1L1Q6UN15 594 aaKnown RBP4.82□□□□□ -1.64
SPTA1-209ENST00000498708 CD300LDQ6UXZ3 194 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 DEF8Q6ZN54 512 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 Q6ZPA2 131 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 Q6ZT83 130 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 USP51Q70EK9 711 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 GALNT5Q7Z7M9 940 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 TDRPQ86YL5 185 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 C4orf33Q8N1A6 199 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 SLC43A2Q8N370 569 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 MUC15Q8N387 334 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 ZNF433Q8N7K0 673 aaPredicted RBP4.82□□□□□ -1.64
SPTA1-209ENST00000498708 ZNF527Q8NB42 609 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 TOR1AIP2Q8NFQ8 470 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 OR52E4Q8NGH9 312 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.82□□□□□ -1.64
SPTA1-209ENST00000498708 HOXB13Q92826 284 aaPredicted RBP4.82□□□□□ -1.64
SPTA1-209ENST00000498708 SLC35B4Q969S0 331 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 FBXO17Q96EF6 278 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 OR7D2Q96RA2 312 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 DHRS9Q9BPW9 319 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 GATA5Q9BWX5 397 aaPredicted RBP4.82□□□□□ -1.64
SPTA1-209ENST00000498708 OSBPL10Q9BXB5 764 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 ACTRT3Q9BYD9 372 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 TUBB1Q9H4B7 451 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 UNKLQ9H9P5 680 aaKnown RBP4.82□□□□□ -1.64
SPTA1-209ENST00000498708 BCO1Q9HAY6 547 aa4.82□□□□□ -1.64
SPTA1-209ENST00000498708 ESM1Q9NQ30 184 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms