RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 TPD52L3Q96J77 140 aa11.32□□□□□ -0.6
HSPG2-213ENST00000498495 ZNF385AQ96PM9 386 aaKnown RBP11.32□□□□□ -0.6
HSPG2-213ENST00000498495 CCT8L2Q96SF2 557 aa11.32□□□□□ -0.6
HSPG2-213ENST00000498495 ASB6Q9NWX5 421 aa11.32□□□□□ -0.6
HSPG2-213ENST00000498495 CIB4A0PJX0 185 aa11.31□□□□□ -0.6
HSPG2-213ENST00000498495 ENO4A6NNW6 628 aa11.31□□□□□ -0.6
HSPG2-213ENST00000498495 DEFB108AA8MXU0 73 aa11.31□□□□□ -0.6
HSPG2-213ENST00000498495 NME4O00746 187 aa11.31□□□□□ -0.6
HSPG2-213ENST00000498495 ZNF43P17038 809 aa11.31□□□□□ -0.6
HSPG2-213ENST00000498495 GRPRP30550 384 aa11.31□□□□□ -0.6
HSPG2-213ENST00000498495 DNAJA1P31689 397 aaKnown RBP11.31□□□□□ -0.6
HSPG2-213ENST00000498495 OR1E2P47887 323 aa11.31□□□□□ -0.6
HSPG2-213ENST00000498495 P2RY4P51582 365 aa11.31□□□□□ -0.6
HSPG2-213ENST00000498495 BEX5Q5H9J7 111 aa11.31□□□□□ -0.6
HSPG2-213ENST00000498495 H1FNTQ75WM6 255 aaPredicted RBP11.31□□□□□ -0.6
HSPG2-213ENST00000498495 ZIC4Q8N9L1 334 aa11.31□□□□□ -0.6
HSPG2-213ENST00000498495 OR6S1Q8NH40 331 aa11.31□□□□□ -0.6
HSPG2-213ENST00000498495 OXGR1Q96P68 337 aa11.31□□□□□ -0.6
HSPG2-213ENST00000498495 TMEM43Q9BTV4 400 aa11.31□□□□□ -0.6
HSPG2-213ENST00000498495 ASPNQ9BXN1 380 aa11.31□□□□□ -0.6
HSPG2-213ENST00000498495 LIME1Q9H400 295 aa11.31□□□□□ -0.6
HSPG2-213ENST00000498495 ALG2Q9H553 416 aa11.31□□□□□ -0.6
HSPG2-213ENST00000498495 NGBQ9NPG2 151 aa11.31□□□□□ -0.6
HSPG2-213ENST00000498495 GMPR2Q9P2T1 348 aaKnown RBP11.31□□□□□ -0.6
HSPG2-213ENST00000498495 B3GALT5Q9Y2C3 310 aa11.31□□□□□ -0.6
HSPG2-213ENST00000498495 M0R082 166 aa11.3□□□□□ -0.6
HSPG2-213ENST00000498495 CXCR6O00574 342 aa11.3□□□□□ -0.6
HSPG2-213ENST00000498495 KLF4O43474 513 aa11.3□□□□□ -0.6
HSPG2-213ENST00000498495 SHOX2O60902 331 aaPredicted RBP11.3□□□□□ -0.6
HSPG2-213ENST00000498495 KRT33AO76009 404 aa11.3□□□□□ -0.6
HSPG2-213ENST00000498495 NQO1P15559 274 aaKnown RBP11.3□□□□□ -0.6
HSPG2-213ENST00000498495 GGT1P19440 569 aa11.3□□□□□ -0.6
HSPG2-213ENST00000498495 TNFRSF1BP20333 461 aa11.3□□□□□ -0.6
HSPG2-213ENST00000498495 PTNP21246 168 aa11.3□□□□□ -0.6
HSPG2-213ENST00000498495 GSK3BP49841 420 aa11.3□□□□□ -0.6
HSPG2-213ENST00000498495 TAS2R41P59536 307 aa11.3□□□□□ -0.6
HSPG2-213ENST00000498495 IL1RL1Q01638 556 aa11.3□□□□□ -0.6
HSPG2-213ENST00000498495 LTBQ06643 244 aa11.3□□□□□ -0.6
HSPG2-213ENST00000498495 C1DQ13901 141 aaKnown RBP11.3□□□□□ -0.6
HSPG2-213ENST00000498495 TAB1Q15750 504 aa11.3□□□□□ -0.6
HSPG2-213ENST00000498495 STK11Q15831 433 aa11.3□□□□□ -0.6
HSPG2-213ENST00000498495 TSPO2Q5TGU0 170 aa11.3□□□□□ -0.6
HSPG2-213ENST00000498495 DEF8Q6ZN54 512 aa11.3□□□□□ -0.6
HSPG2-213ENST00000498495 EPHX4Q8IUS5 362 aa11.3□□□□□ -0.6
HSPG2-213ENST00000498495 ZNF433Q8N7K0 673 aaPredicted RBP11.3□□□□□ -0.6
HSPG2-213ENST00000498495 ZNF417Q8TAU3 575 aa11.3□□□□□ -0.6
HSPG2-213ENST00000498495 MUCL1Q96DR8 90 aa11.3□□□□□ -0.6
HSPG2-213ENST00000498495 SLC41A3Q96GZ6 507 aa11.3□□□□□ -0.6
HSPG2-213ENST00000498495 MPP4Q96JB8 637 aa11.3□□□□□ -0.6
HSPG2-213ENST00000498495 ZNF587Q96SQ5 575 aaPredicted RBP11.3□□□□□ -0.6
HSPG2-213ENST00000498495 KCTD14Q9BQ13 255 aaPredicted RBP11.3□□□□□ -0.6
HSPG2-213ENST00000498495 PCDHAC1Q9H158 963 aa11.3□□□□□ -0.6
HSPG2-213ENST00000498495 PLEKHF2Q9H8W4 249 aa11.3□□□□□ -0.6
HSPG2-213ENST00000498495 SLC7A10Q9NS82 523 aa11.3□□□□□ -0.6
HSPG2-213ENST00000498495 TAS2R16Q9NYV7 291 aa11.3□□□□□ -0.6
HSPG2-213ENST00000498495 ADA2Q9NZK5 511 aa11.3□□□□□ -0.6
HSPG2-213ENST00000498495 TAGLN3Q9UI15 199 aa11.3□□□□□ -0.6
HSPG2-213ENST00000498495 ST6GALNAC2Q9UJ37 374 aa11.3□□□□□ -0.6
HSPG2-213ENST00000498495 SLC7A7Q9UM01 511 aa11.3□□□□□ -0.6
HSPG2-213ENST00000498495 CORINQ9Y5Q5 1042 aa11.3□□□□□ -0.6
HSPG2-213ENST00000498495 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.29□□□□□ -0.6
HSPG2-213ENST00000498495 MS4A18H0YCH9 400 aa11.29□□□□□ -0.6
HSPG2-213ENST00000498495 SIAH2O43255 324 aa11.29□□□□□ -0.6
HSPG2-213ENST00000498495 GMNNO75496 209 aa11.29□□□□□ -0.6
HSPG2-213ENST00000498495 RAD51DO75771 328 aa11.29□□□□□ -0.6
HSPG2-213ENST00000498495 MT-ATP6P00846 226 aa11.29□□□□□ -0.6
HSPG2-213ENST00000498495 BGLAPP02818 100 aa11.29□□□□□ -0.6
HSPG2-213ENST00000498495 THY1P04216 161 aa11.29□□□□□ -0.6
HSPG2-213ENST00000498495 COX5AP20674 150 aa11.29□□□□□ -0.6
HSPG2-213ENST00000498495 DNASE1P24855 282 aa11.29□□□□□ -0.6
HSPG2-213ENST00000498495 IFNA8P32881 189 aa11.29□□□□□ -0.6
HSPG2-213ENST00000498495 IST1P53990 364 aa11.29□□□□□ -0.6
HSPG2-213ENST00000498495 NR1H2P55055 460 aa11.29□□□□□ -0.6
HSPG2-213ENST00000498495 CLDN17P56750 224 aa11.29□□□□□ -0.6
HSPG2-213ENST00000498495 FOXD4Q12950 439 aaPredicted RBP11.29□□□□□ -0.6
HSPG2-213ENST00000498495 PMS2P3Q13401 168 aa11.29□□□□□ -0.6
HSPG2-213ENST00000498495 PIN1Q13526 163 aaPredicted RBP11.29□□□□□ -0.6
HSPG2-213ENST00000498495 MS4A18Q3C1V0 323 aa11.29□□□□□ -0.6
HSPG2-213ENST00000498495 TIMM23BQ5SRD1 257 aa11.29□□□□□ -0.6
HSPG2-213ENST00000498495 GKAP1Q5VSY0 366 aaPredicted RBP11.29□□□□□ -0.6
HSPG2-213ENST00000498495 OR7E24Q6IFN5 339 aa11.29□□□□□ -0.6
HSPG2-213ENST00000498495 NIPAL3Q6P499 406 aa11.29□□□□□ -0.6
HSPG2-213ENST00000498495 SSX8Q7RTT4 187 aa11.29□□□□□ -0.6
HSPG2-213ENST00000498495 P2RY8Q86VZ1 359 aa11.29□□□□□ -0.6
HSPG2-213ENST00000498495 ANKS4BQ8N8V4 417 aa11.29□□□□□ -0.6
HSPG2-213ENST00000498495 POMGNT2Q8NAT1 580 aa11.29□□□□□ -0.6
HSPG2-213ENST00000498495 NINJ1Q92982 152 aa11.29□□□□□ -0.6
HSPG2-213ENST00000498495 FAM162AQ96A26 154 aa11.29□□□□□ -0.6
HSPG2-213ENST00000498495 PLPPR2Q96GM1 343 aa11.29□□□□□ -0.6
HSPG2-213ENST00000498495 POLR2J2Q9GZM3 115 aaKnown RBP11.29□□□□□ -0.6
HSPG2-213ENST00000498495 POLR2J3Q9H1A7 115 aaKnown RBP11.29□□□□□ -0.6
HSPG2-213ENST00000498495 SLCO5A1Q9H2Y9 848 aa11.29□□□□□ -0.6
HSPG2-213ENST00000498495 SPAG4Q9NPE6 437 aa11.29□□□□□ -0.6
HSPG2-213ENST00000498495 ABCD2Q9UBJ2 740 aa11.29□□□□□ -0.6
HSPG2-213ENST00000498495 SEC14L4Q9UDX3 406 aa11.29□□□□□ -0.6
HSPG2-213ENST00000498495 MALT1Q9UDY8 824 aa11.29□□□□□ -0.6
HSPG2-213ENST00000498495 RIMS3Q9UJD0 308 aa11.29□□□□□ -0.6
HSPG2-213ENST00000498495 FREM1Q5H8C1 2179 aa11.28□□□□□ -0.6
HSPG2-213ENST00000498495 NOTCH2Q04721 2471 aa11.28□□□□□ -0.6
HSPG2-213ENST00000498495 CENPEQ02224 2701 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms