RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 NPHS1O60500 1241 aa12.03□□□□□ -0.48
CCDC58-207ENST00000498466 UPK3AO75631 287 aa12.03□□□□□ -0.48
CCDC58-207ENST00000498466 IGFBP1P08833 259 aaPredicted RBP12.03□□□□□ -0.48
CCDC58-207ENST00000498466 G6PDP11413 515 aa12.03□□□□□ -0.48
CCDC58-207ENST00000498466 HOXB1P14653 301 aaPredicted RBP12.03□□□□□ -0.48
CCDC58-207ENST00000498466 UQCRBP14927 111 aa12.03□□□□□ -0.48
CCDC58-207ENST00000498466 KRT4P19013 534 aa12.03□□□□□ -0.48
CCDC58-207ENST00000498466 CXCR1P25024 350 aa12.03□□□□□ -0.48
CCDC58-207ENST00000498466 GPR6P46095 362 aaPredicted RBP12.03□□□□□ -0.48
CCDC58-207ENST00000498466 ROR2Q01974 943 aaKnown RBP12.03□□□□□ -0.48
CCDC58-207ENST00000498466 NPRL3Q12980 569 aa12.03□□□□□ -0.48
CCDC58-207ENST00000498466 SNTB2Q13425 540 aaKnown RBP12.03□□□□□ -0.48
CCDC58-207ENST00000498466 KRT80Q6KB66 452 aa12.03□□□□□ -0.48
CCDC58-207ENST00000498466 FAHD2BQ6P2I3 314 aaPredicted RBP12.03□□□□□ -0.48
CCDC58-207ENST00000498466 USP43Q70EL4 1123 aa12.03□□□□□ -0.48
CCDC58-207ENST00000498466 CREB3L2Q70SY1 520 aa12.03□□□□□ -0.48
CCDC58-207ENST00000498466 CMIPQ8IY22 773 aa12.03□□□□□ -0.48
CCDC58-207ENST00000498466 C4orf33Q8N1A6 199 aa12.03□□□□□ -0.48
CCDC58-207ENST00000498466 TUBGCP3Q96CW5 907 aa12.03□□□□□ -0.48
CCDC58-207ENST00000498466 FAHD2AQ96GK7 314 aa12.03□□□□□ -0.48
CCDC58-207ENST00000498466 JMJD8Q96S16 334 aa12.03□□□□□ -0.48
CCDC58-207ENST00000498466 TAPBPLQ9BX59 468 aa12.03□□□□□ -0.48
CCDC58-207ENST00000498466 NELFAQ9H3P2 528 aa12.03□□□□□ -0.48
CCDC58-207ENST00000498466 CMAHPQ9Y471 501 aa12.03□□□□□ -0.48
CCDC58-207ENST00000498466 IGHV2OR16-5A0A0B4J2B6 119 aa12.02□□□□□ -0.49
CCDC58-207ENST00000498466 CFAP73A6NFT4 308 aa12.02□□□□□ -0.49
CCDC58-207ENST00000498466 SMIM23A6NLE4 172 aa12.02□□□□□ -0.49
CCDC58-207ENST00000498466 RNASET2O00584 256 aaKnown RBP12.02□□□□□ -0.49
CCDC58-207ENST00000498466 TFP02787 698 aa12.02□□□□□ -0.49
CCDC58-207ENST00000498466 SAGP10523 405 aaPredicted RBP12.02□□□□□ -0.49
CCDC58-207ENST00000498466 CBR1P16152 277 aa12.02□□□□□ -0.49
CCDC58-207ENST00000498466 EPHA1P21709 976 aa12.02□□□□□ -0.49
CCDC58-207ENST00000498466 UQCRC2P22695 453 aa12.02□□□□□ -0.49
CCDC58-207ENST00000498466 LIMS1P48059 325 aa12.02□□□□□ -0.49
CCDC58-207ENST00000498466 SH3BGRP55822 239 aaPredicted RBP12.02□□□□□ -0.49
CCDC58-207ENST00000498466 CLDN8P56748 225 aa12.02□□□□□ -0.49
CCDC58-207ENST00000498466 DAG1Q14118 895 aa12.02□□□□□ -0.49
CCDC58-207ENST00000498466 ELFN2Q5R3F8 820 aa12.02□□□□□ -0.49
CCDC58-207ENST00000498466 ZCCHC23Q6ZST2 131 aa12.02□□□□□ -0.49
CCDC58-207ENST00000498466 ANKRD46Q86W74 232 aa12.02□□□□□ -0.49
CCDC58-207ENST00000498466 CARM1Q86X55 608 aa12.02□□□□□ -0.49
CCDC58-207ENST00000498466 MNS1Q8NEH6 495 aa12.02□□□□□ -0.49
CCDC58-207ENST00000498466 OR51F2Q8NH61 342 aa12.02□□□□□ -0.49
CCDC58-207ENST00000498466 KRTAP3-3Q9BYR6 98 aa12.02□□□□□ -0.49
CCDC58-207ENST00000498466 KRTAP3-2Q9BYR7 98 aa12.02□□□□□ -0.49
CCDC58-207ENST00000498466 CRLF2Q9HC73 371 aa12.02□□□□□ -0.49
CCDC58-207ENST00000498466 PKD1L1Q8TDX9 2849 aa12.02□□□□□ -0.49
CCDC58-207ENST00000498466 PRAMEF27A3QJZ7 478 aa12.01□□□□□ -0.49
CCDC58-207ENST00000498466 M0R233 179 aa12.01□□□□□ -0.49
CCDC58-207ENST00000498466 FAAHO00519 579 aa12.01□□□□□ -0.49
CCDC58-207ENST00000498466 SYNGR3O43761 229 aa12.01□□□□□ -0.49
CCDC58-207ENST00000498466 VAMP5O95183 116 aa12.01□□□□□ -0.49
CCDC58-207ENST00000498466 CPSF4O95639 269 aaKnown RBP12.01□□□□□ -0.49
CCDC58-207ENST00000498466 FAM153BP0C7A2 387 aa12.01□□□□□ -0.49
CCDC58-207ENST00000498466 GAAP10253 952 aa12.01□□□□□ -0.49
CCDC58-207ENST00000498466 TCN1P20061 433 aaPredicted RBP12.01□□□□□ -0.49
CCDC58-207ENST00000498466 ALDH3A1P30838 453 aa12.01□□□□□ -0.49
CCDC58-207ENST00000498466 CHI3L1P36222 383 aaPredicted RBP12.01□□□□□ -0.49
CCDC58-207ENST00000498466 ARR3P36575 388 aa12.01□□□□□ -0.49
CCDC58-207ENST00000498466 CAPZA2P47755 286 aa12.01□□□□□ -0.49
CCDC58-207ENST00000498466 P2RY4P51582 365 aa12.01□□□□□ -0.49
CCDC58-207ENST00000498466 ARF1P84077 181 aaKnown RBP12.01□□□□□ -0.49
CCDC58-207ENST00000498466 EPS8Q12929 822 aa12.01□□□□□ -0.49
CCDC58-207ENST00000498466 MAD2L1Q13257 205 aaPredicted RBP12.01□□□□□ -0.49
CCDC58-207ENST00000498466 GNA13Q14344 377 aa12.01□□□□□ -0.49
CCDC58-207ENST00000498466 SLC9B1Q4ZJI4 515 aa12.01□□□□□ -0.49
CCDC58-207ENST00000498466 AWAT1Q58HT5 328 aa12.01□□□□□ -0.49
CCDC58-207ENST00000498466 PRR31Q5SQ13 230 aa12.01□□□□□ -0.49
CCDC58-207ENST00000498466 PRAMEF8Q5VWM4 474 aa12.01□□□□□ -0.49
CCDC58-207ENST00000498466 PRAMEF7Q5VXH5 474 aa12.01□□□□□ -0.49
CCDC58-207ENST00000498466 EPHX4Q8IUS5 362 aa12.01□□□□□ -0.49
CCDC58-207ENST00000498466 TEX29Q8N6K0 151 aa12.01□□□□□ -0.49
CCDC58-207ENST00000498466 IL17RDQ8NFM7 739 aa12.01□□□□□ -0.49
CCDC58-207ENST00000498466 LINC00470Q9BZP3 86 aa12.01□□□□□ -0.49
CCDC58-207ENST00000498466 NOX3Q9HBY0 568 aa12.01□□□□□ -0.49
CCDC58-207ENST00000498466 TREM2Q9NZC2 230 aa12.01□□□□□ -0.49
CCDC58-207ENST00000498466 REV1Q9UBZ9 1251 aa12.01□□□□□ -0.49
CCDC58-207ENST00000498466 MARCOQ9UEW3 520 aaPredicted RBP12.01□□□□□ -0.49
CCDC58-207ENST00000498466 NUP214P35658 2090 aaPredicted RBP12□□□□□ -0.49
CCDC58-207ENST00000498466 AGAP5A6NIR3 686 aa12□□□□□ -0.49
CCDC58-207ENST00000498466 WNT9BO14905 357 aa12□□□□□ -0.49
CCDC58-207ENST00000498466 PNPP00491 289 aa12□□□□□ -0.49
CCDC58-207ENST00000498466 HPXP02790 462 aa12□□□□□ -0.49
CCDC58-207ENST00000498466 SHBGP04278 402 aa12□□□□□ -0.49
CCDC58-207ENST00000498466 CHRM4P08173 479 aa12□□□□□ -0.49
CCDC58-207ENST00000498466 IL7RP16871 459 aa12□□□□□ -0.49
CCDC58-207ENST00000498466 ACHEP22303 614 aa12□□□□□ -0.49
CCDC58-207ENST00000498466 COL8A2P25067 703 aa12□□□□□ -0.49
CCDC58-207ENST00000498466 ARFIP2P53365 341 aa12□□□□□ -0.49
CCDC58-207ENST00000498466 POU3F1Q03052 451 aaPredicted RBP12□□□□□ -0.49
CCDC58-207ENST00000498466 BNIP2Q12982 314 aa12□□□□□ -0.49
CCDC58-207ENST00000498466 SYPL1Q16563 259 aa12□□□□□ -0.49
CCDC58-207ENST00000498466 GSTA3Q16772 222 aa12□□□□□ -0.49
CCDC58-207ENST00000498466 PDLIM3Q53GG5 364 aaPredicted RBP12□□□□□ -0.49
CCDC58-207ENST00000498466 MRPL2Q5T653 305 aaKnown RBP12□□□□□ -0.49
CCDC58-207ENST00000498466 SAXO2Q658L1 398 aa12□□□□□ -0.49
CCDC58-207ENST00000498466 MDP1Q86V88 176 aa12□□□□□ -0.49
CCDC58-207ENST00000498466 IFT20Q8IY31 132 aa12□□□□□ -0.49
CCDC58-207ENST00000498466 ANKFN1Q8N957 763 aa12□□□□□ -0.49
CCDC58-207ENST00000498466 OR8J2Q8NGG1 315 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms