RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 GREB1Q4ZG55 1949 aa9.8□□□□□ -0.84
TRAPPC12-223ENST00000497597 OR6C65A6NJZ3 312 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 LATO43561 262 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 HLA-AP01891 365 aaKnown RBP9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 GP1BAP07359 652 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 ZDHHC11BP0C7U3 371 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 OR8G3PP0DMU2 310 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 SDHAP31040 664 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 TAS2R43P59537 309 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 ADAM8P78325 824 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 FOXK2Q01167 660 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 SKP2Q13309 424 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 ZNF425Q6IV72 752 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 ZNF836Q6ZNA1 936 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 CHST9Q7L1S5 443 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 CAMKMTQ7Z624 323 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 TMEM200AQ86VY9 491 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 TMEM173Q86WV6 379 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 GLB1L2Q8IW92 636 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 FBXO22Q8NEZ5 403 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 NUP43Q8NFH3 380 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 CD300LFQ8TDQ1 290 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 DCUN1D4Q92564 292 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 MRPL48Q96GC5 212 aaKnown RBP9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 SLC6A7Q99884 636 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 GSKIPQ9P0R6 139 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 KIAA0355O15063 1070 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 SLC16A5O15375 505 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 ITGA10O75578 1167 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 NDUFB6O95139 128 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 SERPINA5P05154 406 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 GPR1P46091 355 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 RAG2P55895 527 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 RAB2AP61019 212 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 SIRPAP78324 504 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 CLLU1OSQ5K130 101 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 FAM83HQ6ZRV2 1179 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 NAXDQ8IW45 347 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 SPICQ8N5J4 248 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 HS6ST2Q96MM7 605 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 PAPOLGQ9BWT3 736 aaKnown RBP9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 NRIP3Q9NQ35 241 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 TBC1D3DA0A087WVF3 549 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 TBC1D3IA0A087WXS9 549 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 TBC1D3EA0A087X179 549 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 TBC1D3KA0A087X1G2 549 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 A0A1B0GV90 55 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 CARNS1A5YM72 827 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 TBC1D3BA6NDS4 549 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 TBC1D3FA6NER0 549 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 TBC1D3LB9A6J9 549 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 RAB3DO95716 219 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 KLK3P07288 261 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 TBC1D3HP0C7X1 549 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 ADH6P28332 368 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 PPM1FP49593 454 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 NR0B1P51843 470 aaKnown RBP9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 PNLIPRP1P54315 467 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 ATP1B3P54709 279 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 TAS2R38P59533 333 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 PPIAP62937 165 aaKnown RBP9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 LTBQ06643 244 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 SREBF2Q12772 1141 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 ELAVL1Q15717 326 aaKnown RBP9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 ACER2Q5QJU3 275 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 CST9Q5W186 159 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 TBC1D3GQ6DHY5 549 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 TBC1D3CQ6IPX1 549 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 FAM129CQ86XR2 697 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 TBC1D3Q8IZP1 549 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 OR1J4Q8NGS1 313 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 PPP1R1CQ8WVI7 109 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 RGP1Q92546 391 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 TNFRSF13CQ96RJ3 184 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 RASL12Q9NYN1 266 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 SLC25A13Q9UJS0 675 aa9.79□□□□□ -0.84
TRAPPC12-223ENST00000497597 DOCK4Q8N1I0 1966 aa9.78□□□□□ -0.84
TRAPPC12-223ENST00000497597 hCG_1809904A0A1W2PP81 198 aa9.78□□□□□ -0.84
TRAPPC12-223ENST00000497597 A0A1W2PR64 198 aa9.78□□□□□ -0.84
TRAPPC12-223ENST00000497597 A0A1W2PRV1 198 aa9.78□□□□□ -0.84
TRAPPC12-223ENST00000497597 TMEM82A0PJX8 343 aa9.78□□□□□ -0.84
TRAPPC12-223ENST00000497597 OR2M5A3KFT3 312 aa9.78□□□□□ -0.84
TRAPPC12-223ENST00000497597 IFITM5A6NNB3 132 aa9.78□□□□□ -0.84
TRAPPC12-223ENST00000497597 NEDD8-MDP1E9PL57 170 aa9.78□□□□□ -0.84
TRAPPC12-223ENST00000497597 CACNB4O00305 520 aaPredicted RBP9.78□□□□□ -0.84
TRAPPC12-223ENST00000497597 NDUFS4O43181 175 aa9.78□□□□□ -0.84
TRAPPC12-223ENST00000497597 C1orf105O95561 183 aa9.78□□□□□ -0.84
TRAPPC12-223ENST00000497597 IFNA4P05014 189 aa9.78□□□□□ -0.84
TRAPPC12-223ENST00000497597 CD63P08962 238 aa9.78□□□□□ -0.84
TRAPPC12-223ENST00000497597 MGMTP16455 207 aa9.78□□□□□ -0.84
TRAPPC12-223ENST00000497597 S100PP25815 95 aa9.78□□□□□ -0.84
TRAPPC12-223ENST00000497597 AVPR2P30518 371 aa9.78□□□□□ -0.84
TRAPPC12-223ENST00000497597 RBM34P42696 430 aaKnown RBP9.78□□□□□ -0.84
TRAPPC12-223ENST00000497597 MAPK8P45983 427 aa9.78□□□□□ -0.84
TRAPPC12-223ENST00000497597 PDX1P52945 283 aa9.78□□□□□ -0.84
TRAPPC12-223ENST00000497597 PLA2G7Q13093 441 aa9.78□□□□□ -0.84
TRAPPC12-223ENST00000497597 MRPL58Q14197 206 aaKnown RBP9.78□□□□□ -0.84
TRAPPC12-223ENST00000497597 TSC22D1Q15714 1073 aa9.78□□□□□ -0.84
TRAPPC12-223ENST00000497597 AMZ1Q400G9 498 aa9.78□□□□□ -0.84
TRAPPC12-223ENST00000497597 NKAPLQ5M9Q1 402 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms