RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, human

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-210	ENST00000496840	TBX21	Q9UL17	535 aa		3.23	□□□□□ -1.89
TARDBP-210	ENST00000496840	ATAD2B	Q9ULI0	1458 aa		3.22	□□□□□ -1.89
TARDBP-210	ENST00000496840	IGKV1D-8	A0A087WSZ0	117 aa		3.22	□□□□□ -1.89
TARDBP-210	ENST00000496840	TRAV26-1	A0A087WT03	109 aa		3.22	□□□□□ -1.89
TARDBP-210	ENST00000496840	PRKAB2	O43741	272 aa		3.22	□□□□□ -1.89
TARDBP-210	ENST00000496840	SLC25A27	O95847	323 aa		3.22	□□□□□ -1.89
TARDBP-210	ENST00000496840	LGI1	O95970	557 aa		3.22	□□□□□ -1.89
TARDBP-210	ENST00000496840	COX5A	P20674	150 aa		3.22	□□□□□ -1.89
TARDBP-210	ENST00000496840	GRIA1	P42261	906 aa		3.22	□□□□□ -1.89
TARDBP-210	ENST00000496840	TFPI2	P48307	235 aa		3.22	□□□□□ -1.89
TARDBP-210	ENST00000496840	CCR6	P51684	374 aa		3.22	□□□□□ -1.89
TARDBP-210	ENST00000496840	ZNF136	P52737	540 aa		3.22	□□□□□ -1.89
TARDBP-210	ENST00000496840	SFT2D3	Q587I9	215 aa		3.22	□□□□□ -1.89
TARDBP-210	ENST00000496840	OR2G6	Q5TZ20	316 aa		3.22	□□□□□ -1.89
TARDBP-210	ENST00000496840	CENPP	Q6IPU0	288 aa		3.22	□□□□□ -1.89
TARDBP-210	ENST00000496840	ZSCAN25	Q6NSZ9	544 aa		3.22	□□□□□ -1.89
TARDBP-210	ENST00000496840	ZNF679	Q8IYX0	411 aa		3.22	□□□□□ -1.89
TARDBP-210	ENST00000496840	ZCCHC7	Q8N3Z6	543 aa	Known RBP	3.22	□□□□□ -1.89
TARDBP-210	ENST00000496840	MFSD9	Q8NBP5	474 aa		3.22	□□□□□ -1.89
TARDBP-210	ENST00000496840	OR5D13	Q8NGL4	314 aa		3.22	□□□□□ -1.89
TARDBP-210	ENST00000496840	RAPGEF5	Q92565	580 aa		3.22	□□□□□ -1.89
TARDBP-210	ENST00000496840	SECISBP2	Q96T21	854 aa	Known RBP	3.22	□□□□□ -1.89
TARDBP-210	ENST00000496840	RASL11B	Q9BPW5	248 aa		3.22	□□□□□ -1.89
TARDBP-210	ENST00000496840	TMEM43	Q9BTV4	400 aa		3.22	□□□□□ -1.89
TARDBP-210	ENST00000496840	VCX2	Q9H322	139 aa		3.22	□□□□□ -1.89
TARDBP-210	ENST00000496840	EXTL2	Q9UBQ6	330 aa		3.22	□□□□□ -1.89
TARDBP-210	ENST00000496840	CLSPN	Q9HAW4	1339 aa		3.21	□□□□□ -1.89
TARDBP-210	ENST00000496840	IDS	B3KWA1	339 aa		3.21	□□□□□ -1.9
TARDBP-210	ENST00000496840	RAMP3	O60896	148 aa		3.21	□□□□□ -1.9
TARDBP-210	ENST00000496840	POU2F1	P14859	743 aa		3.21	□□□□□ -1.9
TARDBP-210	ENST00000496840	NCK1	P16333	377 aa		3.21	□□□□□ -1.9
TARDBP-210	ENST00000496840	CRISP2	P16562	243 aa		3.21	□□□□□ -1.9
TARDBP-210	ENST00000496840	CALR	P27797	417 aa	Known RBP	3.21	□□□□□ -1.9
TARDBP-210	ENST00000496840	GCA	P28676	217 aa		3.21	□□□□□ -1.9
TARDBP-210	ENST00000496840	QARS	P47897	775 aa	Known RBP	3.21	□□□□□ -1.9
TARDBP-210	ENST00000496840	SH3BGR	P55822	239 aa	Predicted RBP	3.21	□□□□□ -1.9
TARDBP-210	ENST00000496840	MADCAM1	Q13477	382 aa		3.21	□□□□□ -1.9
TARDBP-210	ENST00000496840	NSUN5P1	Q3KNT7	163 aa		3.21	□□□□□ -1.9
TARDBP-210	ENST00000496840	OR4F3	Q6IEY1	312 aa		3.21	□□□□□ -1.9
TARDBP-210	ENST00000496840	PMF1	Q6P1K2	205 aa		3.21	□□□□□ -1.9
TARDBP-210	ENST00000496840	TMEM61	Q8N0U2	210 aa		3.21	□□□□□ -1.9
TARDBP-210	ENST00000496840	PNKD	Q8N490	385 aa		3.21	□□□□□ -1.9
TARDBP-210	ENST00000496840	OR6X1	Q8NH79	312 aa		3.21	□□□□□ -1.9
TARDBP-210	ENST00000496840	SLC38A2	Q96QD8	506 aa		3.21	□□□□□ -1.9
TARDBP-210	ENST00000496840	CAPS2	Q9BXY5	557 aa		3.21	□□□□□ -1.9
TARDBP-210	ENST00000496840	PARD6B	Q9BYG5	372 aa		3.21	□□□□□ -1.9
TARDBP-210	ENST00000496840	PLGRKT	Q9HBL7	147 aa		3.21	□□□□□ -1.9
TARDBP-210	ENST00000496840	EML4	Q9HC35	981 aa	Known RBP	3.21	□□□□□ -1.9
TARDBP-210	ENST00000496840	RBAK	Q9NYW8	714 aa	Predicted RBP	3.21	□□□□□ -1.9
TARDBP-210	ENST00000496840	CLEC4A	Q9UMR7	237 aa		3.21	□□□□□ -1.9
TARDBP-210	ENST00000496840	ASF1A	Q9Y294	204 aa		3.21	□□□□□ -1.9
TARDBP-210	ENST00000496840	FRMPD3	Q5JV73	1810 aa		3.21	□□□□□ -1.9
TARDBP-210	ENST00000496840	CLRN2	A0PK11	232 aa		3.2	□□□□□ -1.9
TARDBP-210	ENST00000496840	SERPINE3	A8MV23	424 aa		3.2	□□□□□ -1.9
TARDBP-210	ENST00000496840	DCTN6	O00399	190 aa		3.2	□□□□□ -1.9
TARDBP-210	ENST00000496840	RGS16	O15492	202 aa	Predicted RBP	3.2	□□□□□ -1.9
TARDBP-210	ENST00000496840	ZNF208	O43345	1280 aa		3.2	□□□□□ -1.9
TARDBP-210	ENST00000496840	PFKFB2	O60825	505 aa		3.2	□□□□□ -1.9
TARDBP-210	ENST00000496840	DIRAS1	O95057	198 aa		3.2	□□□□□ -1.9
TARDBP-210	ENST00000496840	STAMBP	O95630	424 aa		3.2	□□□□□ -1.9
TARDBP-210	ENST00000496840	AP2A1	O95782	977 aa		3.2	□□□□□ -1.9
TARDBP-210	ENST00000496840	IL1B	P01584	269 aa		3.2	□□□□□ -1.9
TARDBP-210	ENST00000496840	CCT3	P49368	545 aa	Known RBP	3.2	□□□□□ -1.9
TARDBP-210	ENST00000496840	DUSP3	P51452	185 aa	Predicted RBP	3.2	□□□□□ -1.9
TARDBP-210	ENST00000496840	SLC15A2	Q16348	729 aa		3.2	□□□□□ -1.9
TARDBP-210	ENST00000496840	MAJIN	Q3KP22	176 aa		3.2	□□□□□ -1.9
TARDBP-210	ENST00000496840	CARD16	Q5EG05	197 aa		3.2	□□□□□ -1.9
TARDBP-210	ENST00000496840	PDZK1	Q5T2W1	519 aa		3.2	□□□□□ -1.9
TARDBP-210	ENST00000496840	FAM71E1	Q6IPT2	247 aa		3.2	□□□□□ -1.9
TARDBP-210	ENST00000496840	KRTAP5-7	Q6L8G8	165 aa		3.2	□□□□□ -1.9
TARDBP-210	ENST00000496840	PRSS41	Q7RTY9	318 aa		3.2	□□□□□ -1.9
TARDBP-210	ENST00000496840	LRRC75A-AS1	Q8N1F1	130 aa		3.2	□□□□□ -1.9
TARDBP-210	ENST00000496840	DUSP18	Q8NEJ0	188 aa		3.2	□□□□□ -1.9
TARDBP-210	ENST00000496840	OR8J1	Q8NGP2	316 aa		3.2	□□□□□ -1.9
TARDBP-210	ENST00000496840	HTR3C	Q8WXA8	447 aa		3.2	□□□□□ -1.9
TARDBP-210	ENST00000496840	ZNF606	Q8WXB4	792 aa		3.2	□□□□□ -1.9
TARDBP-210	ENST00000496840	DEDD2	Q8WXF8	326 aa		3.2	□□□□□ -1.9
TARDBP-210	ENST00000496840	PELO	Q9BRX2	385 aa	Known RBP	3.2	□□□□□ -1.9
TARDBP-210	ENST00000496840	GON7	Q9BXV9	100 aa		3.2	□□□□□ -1.9
TARDBP-210	ENST00000496840	KIF25	Q9UIL4	384 aa		3.2	□□□□□ -1.9
TARDBP-210	ENST00000496840	ADAM28	Q9UKQ2	775 aa		3.2	□□□□□ -1.9
TARDBP-210	ENST00000496840	CDH9	Q9ULB4	789 aa		3.2	□□□□□ -1.9
TARDBP-210	ENST00000496840	STAP1	Q9ULZ2	295 aa		3.2	□□□□□ -1.9
TARDBP-210	ENST00000496840	PNPLA6	Q8IY17	1366 aa		3.2	□□□□□ -1.9
TARDBP-210	ENST00000496840	SCN2A	Q99250	2005 aa		3.2	□□□□□ -1.9
TARDBP-210	ENST00000496840	IGHV1OR21-1	A0A087WYE8	117 aa		3.19	□□□□□ -1.9
TARDBP-210	ENST00000496840	SURF6	O75683	361 aa	Known RBP	3.19	□□□□□ -1.9
TARDBP-210	ENST00000496840	ATP5L	O75964	103 aa		3.19	□□□□□ -1.9
TARDBP-210	ENST00000496840	IGHD	P01880	384 aa		3.19	□□□□□ -1.9
TARDBP-210	ENST00000496840	IGFBP3	P17936	291 aa	Predicted RBP	3.19	□□□□□ -1.9
TARDBP-210	ENST00000496840	TBP	P20226	339 aa		3.19	□□□□□ -1.9
TARDBP-210	ENST00000496840	HMGB2	P26583	209 aa	Known RBP	3.19	□□□□□ -1.9
TARDBP-210	ENST00000496840	KLK7	P49862	253 aa		3.19	□□□□□ -1.9
TARDBP-210	ENST00000496840	CRYBB1	P53674	252 aa	Predicted RBP	3.19	□□□□□ -1.9
TARDBP-210	ENST00000496840	ZNF763	Q0D2J5	394 aa		3.19	□□□□□ -1.9
TARDBP-210	ENST00000496840	RIPK1	Q13546	671 aa		3.19	□□□□□ -1.9
TARDBP-210	ENST00000496840	VGLL4	Q14135	290 aa		3.19	□□□□□ -1.9
TARDBP-210	ENST00000496840	ARL6IP1	Q15041	203 aa		3.19	□□□□□ -1.9
TARDBP-210	ENST00000496840	LRRC23	Q53EV4	343 aa	Predicted RBP	3.19	□□□□□ -1.9
TARDBP-210	ENST00000496840	RFLNA	Q6ZTI6	216 aa		3.19	□□□□□ -1.9

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