RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 HCRTR2O43614 444 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 SDHAP31040 664 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 ARRB1P49407 418 aaPredicted RBP11.89□□□□□ -0.51
GARNL3-220ENST00000496711 HSF2Q03933 536 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 DMWDQ09019 674 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 P2RY14Q15391 338 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 ACSM3Q53FZ2 586 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 ZNF544Q6NX49 715 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 PAMR1Q6UXH9 720 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 NUP54Q7Z3B4 507 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 NANOGNBQ7Z5D8 188 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 TEX19Q8NA77 164 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 OR1N1Q8NGS0 311 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 ELF4Q99607 663 aaPredicted RBP11.89□□□□□ -0.51
GARNL3-220ENST00000496711 WDR70Q9NW82 654 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 GNG8Q9UK08 70 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 COPS3Q9UNS2 423 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 CPAMD8Q8IZJ3 1885 aa11.88□□□□□ -0.51
GARNL3-220ENST00000496711 TRIOBPQ9H2D6 2365 aa11.88□□□□□ -0.51
GARNL3-220ENST00000496711 CACNA1EQ15878 2313 aa11.88□□□□□ -0.51
GARNL3-220ENST00000496711 ALG1L2C9J202 215 aa11.88□□□□□ -0.51
GARNL3-220ENST00000496711 EIF4E2O60573 245 aaKnown RBP11.88□□□□□ -0.51
GARNL3-220ENST00000496711 CD1AP06126 327 aa11.88□□□□□ -0.51
GARNL3-220ENST00000496711 IMPDH2P12268 514 aa11.88□□□□□ -0.51
GARNL3-220ENST00000496711 ELK1P19419 428 aa11.88□□□□□ -0.51
GARNL3-220ENST00000496711 THBS2P35442 1172 aa11.88□□□□□ -0.51
GARNL3-220ENST00000496711 TMED10P49755 219 aaKnown RBP11.88□□□□□ -0.51
GARNL3-220ENST00000496711 SLC25A1P53007 311 aa11.88□□□□□ -0.51
GARNL3-220ENST00000496711 CTXN1P60606 82 aa11.88□□□□□ -0.51
GARNL3-220ENST00000496711 SHBQ15464 509 aa11.88□□□□□ -0.51
GARNL3-220ENST00000496711 RPL22L1Q6P5R6 122 aaKnown RBP11.88□□□□□ -0.51
GARNL3-220ENST00000496711 LRRC28Q86X40 367 aaPredicted RBP11.88□□□□□ -0.51
GARNL3-220ENST00000496711 C19orf18Q8NEA5 215 aa11.88□□□□□ -0.51
GARNL3-220ENST00000496711 OR13C5Q8NGS8 318 aa11.88□□□□□ -0.51
GARNL3-220ENST00000496711 ZNF524Q96C55 264 aa11.88□□□□□ -0.51
GARNL3-220ENST00000496711 OMA1Q96E52 524 aa11.88□□□□□ -0.51
GARNL3-220ENST00000496711 KTI12Q96EK9 354 aaPredicted RBP11.88□□□□□ -0.51
GARNL3-220ENST00000496711 UBL7Q96S82 380 aaPredicted RBP11.88□□□□□ -0.51
GARNL3-220ENST00000496711 KLHDC3Q9BQ90 382 aa11.88□□□□□ -0.51
GARNL3-220ENST00000496711 TBL1XR1Q9BZK7 514 aa11.88□□□□□ -0.51
GARNL3-220ENST00000496711 RTN4RQ9BZR6 473 aa11.88□□□□□ -0.51
GARNL3-220ENST00000496711 ADAM19Q9H013 955 aa11.88□□□□□ -0.51
GARNL3-220ENST00000496711 B3GAT2Q9NPZ5 323 aa11.88□□□□□ -0.51
GARNL3-220ENST00000496711 RPRD1BQ9NQG5 326 aaKnown RBP11.88□□□□□ -0.51
GARNL3-220ENST00000496711 ACOXLQ9NUZ1 547 aa11.88□□□□□ -0.51
GARNL3-220ENST00000496711 NCDNQ9UBB6 729 aa11.88□□□□□ -0.51
GARNL3-220ENST00000496711 EXTL2Q9UBQ6 330 aa11.88□□□□□ -0.51
GARNL3-220ENST00000496711 CTSFQ9UBX1 484 aa11.88□□□□□ -0.51
GARNL3-220ENST00000496711 PAIP2BQ9ULR5 123 aaKnown RBP11.88□□□□□ -0.51
GARNL3-220ENST00000496711 SRPK3Q9UPE1 567 aa11.88□□□□□ -0.51
GARNL3-220ENST00000496711 TNRC18O15417 2968 aaPredicted RBP11.88□□□□□ -0.51
GARNL3-220ENST00000496711 A0A0G2JK05 382 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 MAGEB4O15481 346 aaPredicted RBP11.87□□□□□ -0.51
GARNL3-220ENST00000496711 NDUFB5O43674 189 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 CDC40O60508 579 aaKnown RBP eCLIP11.87□□□□□ -0.51
GARNL3-220ENST00000496711 TXNDC12O95881 172 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 DCNP07585 359 aaKnown RBP11.87□□□□□ -0.51
GARNL3-220ENST00000496711 ABCD3P28288 659 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 CDKN2AP42771 156 aaKnown RBP11.87□□□□□ -0.51
GARNL3-220ENST00000496711 HTR3AP46098 478 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 OR10A3P58181 314 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 SIRPAP78324 504 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 LTBQ06643 244 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 RPL18Q07020 188 aaKnown RBP11.87□□□□□ -0.51
GARNL3-220ENST00000496711 CCDC58Q4VC31 144 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 LINC01590Q5TEZ4 76 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 LANCL3Q6ZV70 420 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 MARCH3Q86UD3 253 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 ZNF441Q8N8Z8 693 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 ENKURQ8TC29 256 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 THAP4Q8WY91 577 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 LPAR4Q99677 370 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 ALG12Q9BV10 488 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 FKRPQ9H9S5 495 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 INIPQ9NRY2 104 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 RASD1Q9Y272 281 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 CABIN1Q9Y6J0 2220 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 TRAV1-2A0A0B4J238 106 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 TOX3O15405 576 aaPredicted RBP11.87□□□□□ -0.51
GARNL3-220ENST00000496711 PLA2G10O15496 165 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 GMFGO60234 142 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 CPNE3O75131 537 aaKnown RBP11.87□□□□□ -0.51
GARNL3-220ENST00000496711 ARL6IP5O75915 188 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 PGCP20142 388 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 RAB3BP20337 219 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 CXCR1P25024 350 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 EDNRAP25101 427 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 RBMS1P29558 406 aaKnown RBP11.87□□□□□ -0.51
GARNL3-220ENST00000496711 TALDO1P37837 337 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 RPS5P46782 204 aaKnown RBP11.87□□□□□ -0.51
GARNL3-220ENST00000496711 PNLIPRP2P54317 469 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 EMC4Q5J8M3 183 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 LYPD4Q6UWN0 246 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 COX15Q7KZN9 410 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 RDH10Q8IZV5 341 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 EXD3Q8N9H8 876 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 PLPP5Q8NEB5 264 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 MMP28Q9H239 520 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 RXFP3Q9NSD7 469 aa11.87□□□□□ -0.51
GARNL3-220ENST00000496711 GRHPRQ9UBQ7 328 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms