RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 PATL1Q86TB9 770 aaKnown RBP12.75□□□□□ -0.37
PDAP1-204ENST00000496335 CALHM3Q86XJ0 350 aa12.75□□□□□ -0.37
PDAP1-204ENST00000496335 RBM45Q8IUH3 476 aaKnown RBP12.75□□□□□ -0.37
PDAP1-204ENST00000496335 SLC30A8Q8IWU4 369 aa12.75□□□□□ -0.37
PDAP1-204ENST00000496335 POU5F2Q8N7G0 328 aa12.75□□□□□ -0.37
PDAP1-204ENST00000496335 OR4D11Q8NGI4 311 aa12.75□□□□□ -0.37
PDAP1-204ENST00000496335 OR6T1Q8NGN1 323 aa12.75□□□□□ -0.37
PDAP1-204ENST00000496335 OR52N5Q8NH56 324 aa12.75□□□□□ -0.37
PDAP1-204ENST00000496335 VANGL1Q8TAA9 524 aaPredicted RBP12.75□□□□□ -0.37
PDAP1-204ENST00000496335 SLC38A4Q969I6 547 aa12.75□□□□□ -0.37
PDAP1-204ENST00000496335 TMEM45BQ96B21 275 aa12.75□□□□□ -0.37
PDAP1-204ENST00000496335 MUCL1Q96DR8 90 aa12.75□□□□□ -0.37
PDAP1-204ENST00000496335 SLC47A1Q96FL8 570 aa12.75□□□□□ -0.37
PDAP1-204ENST00000496335 ARHGDIGQ99819 225 aa12.75□□□□□ -0.37
PDAP1-204ENST00000496335 USB1Q9BQ65 265 aaKnown RBP12.75□□□□□ -0.37
PDAP1-204ENST00000496335 ECSITQ9BQ95 431 aa12.75□□□□□ -0.37
PDAP1-204ENST00000496335 NGBQ9NPG2 151 aa12.75□□□□□ -0.37
PDAP1-204ENST00000496335 BEX4Q9NWD9 120 aaPredicted RBP12.75□□□□□ -0.37
PDAP1-204ENST00000496335 UPB1Q9UBR1 384 aa12.75□□□□□ -0.37
PDAP1-204ENST00000496335 CAPN7Q9Y6W3 813 aa12.75□□□□□ -0.37
PDAP1-204ENST00000496335 A0A087WUJ7 227 aa12.74□□□□□ -0.37
PDAP1-204ENST00000496335 DPRXA6NFQ7 191 aa12.74□□□□□ -0.37
PDAP1-204ENST00000496335 OR5H1A6NKK0 313 aa12.74□□□□□ -0.37
PDAP1-204ENST00000496335 PDLIM1O00151 329 aa12.74□□□□□ -0.37
PDAP1-204ENST00000496335 CLOCKO15516 846 aa12.74□□□□□ -0.37
PDAP1-204ENST00000496335 VAMP5O95183 116 aa12.74□□□□□ -0.37
PDAP1-204ENST00000496335 NPPAP01160 153 aa12.74□□□□□ -0.37
PDAP1-204ENST00000496335 C8BP07358 591 aa12.74□□□□□ -0.37
PDAP1-204ENST00000496335 CD247P20963 164 aa12.74□□□□□ -0.37
PDAP1-204ENST00000496335 CDH12P55289 794 aa12.74□□□□□ -0.37
PDAP1-204ENST00000496335 ADAM8P78325 824 aa12.74□□□□□ -0.37
PDAP1-204ENST00000496335 BSPH1Q075Z2 132 aa12.74□□□□□ -0.37
PDAP1-204ENST00000496335 LGALS3BPQ08380 585 aa12.74□□□□□ -0.37
PDAP1-204ENST00000496335 GABRA6Q16445 453 aa12.74□□□□□ -0.37
PDAP1-204ENST00000496335 NRF1Q16656 503 aa12.74□□□□□ -0.37
PDAP1-204ENST00000496335 TIMM23BQ5SRD1 257 aa12.74□□□□□ -0.37
PDAP1-204ENST00000496335 CREB3L2Q70SY1 520 aa12.74□□□□□ -0.37
PDAP1-204ENST00000496335 RANBP3LQ86VV4 465 aaPredicted RBP12.74□□□□□ -0.37
PDAP1-204ENST00000496335 TGIF2LYQ8IUE0 185 aa12.74□□□□□ -0.37
PDAP1-204ENST00000496335 EPHX4Q8IUS5 362 aa12.74□□□□□ -0.37
PDAP1-204ENST00000496335 OR8J3Q8NGG0 315 aa12.74□□□□□ -0.37
PDAP1-204ENST00000496335 LILRB1Q8NHL6 650 aaPredicted RBP12.74□□□□□ -0.37
PDAP1-204ENST00000496335 SLC26A7Q8TE54 656 aa12.74□□□□□ -0.37
PDAP1-204ENST00000496335 AKAP1Q92667 903 aaKnown RBP eCLIP12.74□□□□□ -0.373e-6■■■■□ 22.6
PDAP1-204ENST00000496335 NEUROG1Q92886 237 aa12.74□□□□□ -0.37
PDAP1-204ENST00000496335 RCN3Q96D15 328 aa12.74□□□□□ -0.37
PDAP1-204ENST00000496335 ZNF583Q96ND8 569 aa12.74□□□□□ -0.37
PDAP1-204ENST00000496335 MCHR1Q99705 422 aa12.74□□□□□ -0.37
PDAP1-204ENST00000496335 CCL19Q99731 98 aa12.74□□□□□ -0.37
PDAP1-204ENST00000496335 SH3GL1Q99961 368 aa12.74□□□□□ -0.37
PDAP1-204ENST00000496335 TAS2R16Q9NYV7 291 aa12.74□□□□□ -0.37
PDAP1-204ENST00000496335 NPAP1Q9NZP6 1156 aa12.74□□□□□ -0.37
PDAP1-204ENST00000496335 SELENONQ9NZV5 590 aa12.74□□□□□ -0.37
PDAP1-204ENST00000496335 RASD1Q9Y272 281 aa12.74□□□□□ -0.37
PDAP1-204ENST00000496335 RNF115Q9Y4L5 304 aa12.74□□□□□ -0.37
PDAP1-204ENST00000496335 SETD2Q9BYW2 2564 aaPredicted RBP12.74□□□□□ -0.37
PDAP1-204ENST00000496335 TRAV36DV7A0A075B6V5 113 aa12.73□□□□□ -0.37
PDAP1-204ENST00000496335 CPSF4LA6NMK7 179 aaKnown RBP12.73□□□□□ -0.37
PDAP1-204ENST00000496335 M0R082 166 aa12.73□□□□□ -0.37
PDAP1-204ENST00000496335 HS3ST1O14792 307 aa12.73□□□□□ -0.37
PDAP1-204ENST00000496335 OR2T1O43869 369 aa12.73□□□□□ -0.37
PDAP1-204ENST00000496335 CD3EP07766 207 aa12.73□□□□□ -0.37
PDAP1-204ENST00000496335 GTF2E2P29084 291 aaKnown RBP12.73□□□□□ -0.37
PDAP1-204ENST00000496335 GRPRP30550 384 aa12.73□□□□□ -0.37
PDAP1-204ENST00000496335 SELENOPP49908 381 aa12.73□□□□□ -0.37
PDAP1-204ENST00000496335 LTBQ06643 244 aa12.73□□□□□ -0.37
PDAP1-204ENST00000496335 FAM69AQ5T7M9 428 aa12.73□□□□□ -0.37
PDAP1-204ENST00000496335 INTS11Q5TA45 600 aaKnown RBP12.73□□□□□ -0.37
PDAP1-204ENST00000496335 C20orf204Q6ZNR8 217 aa12.73□□□□□ -0.37
PDAP1-204ENST00000496335 CCDC80Q76M96 950 aa12.73□□□□□ -0.37
PDAP1-204ENST00000496335 TSPYL5Q86VY4 417 aaPredicted RBP12.73□□□□□ -0.37
PDAP1-204ENST00000496335 P2RY8Q86VZ1 359 aa12.73□□□□□ -0.37
PDAP1-204ENST00000496335 PCYOX1LQ8NBM8 494 aa12.73□□□□□ -0.37
PDAP1-204ENST00000496335 WFDC11Q8NEX6 87 aa12.73□□□□□ -0.37
PDAP1-204ENST00000496335 ZNF417Q8TAU3 575 aa12.73□□□□□ -0.37
PDAP1-204ENST00000496335 PIGTQ969N2 578 aa12.73□□□□□ -0.37
PDAP1-204ENST00000496335 MUS81Q96NY9 551 aa12.73□□□□□ -0.37
PDAP1-204ENST00000496335 ZNF587Q96SQ5 575 aaPredicted RBP12.73□□□□□ -0.37
PDAP1-204ENST00000496335 TMUB1Q9BVT8 246 aa12.73□□□□□ -0.37
PDAP1-204ENST00000496335 SLCO5A1Q9H2Y9 848 aa12.73□□□□□ -0.37
PDAP1-204ENST00000496335 ESRP2Q9H6T0 727 aaKnown RBP12.73□□□□□ -0.37
PDAP1-204ENST00000496335 EVA1AQ9H8M9 152 aa12.73□□□□□ -0.37
PDAP1-204ENST00000496335 GID8Q9NWU2 228 aa12.73□□□□□ -0.37
PDAP1-204ENST00000496335 LRRN3E7EW58 273 aa12.72□□□□□ -0.37
PDAP1-204ENST00000496335 SLC22A2O15244 555 aa12.72□□□□□ -0.37
PDAP1-204ENST00000496335 FMO6PO60774 539 aa12.72□□□□□ -0.37
PDAP1-204ENST00000496335 SMPD2O60906 423 aa12.72□□□□□ -0.37
PDAP1-204ENST00000496335 FZD7O75084 574 aa12.72□□□□□ -0.37
PDAP1-204ENST00000496335 BGLAPP02818 100 aa12.72□□□□□ -0.37
PDAP1-204ENST00000496335 THY1P04216 161 aa12.72□□□□□ -0.37
PDAP1-204ENST00000496335 CD99P14209 185 aa12.72□□□□□ -0.37
PDAP1-204ENST00000496335 CDH2P19022 906 aaPredicted RBP12.72□□□□□ -0.37
PDAP1-204ENST00000496335 HOXC12P31275 282 aa12.72□□□□□ -0.37
PDAP1-204ENST00000496335 SEC24CP53992 1094 aa12.72□□□□□ -0.37
PDAP1-204ENST00000496335 NKX6-1P78426 367 aaPredicted RBP12.72□□□□□ -0.37
PDAP1-204ENST00000496335 FOXD4Q12950 439 aaPredicted RBP12.72□□□□□ -0.37
PDAP1-204ENST00000496335 ENTPD8Q5MY95 495 aa12.72□□□□□ -0.37
PDAP1-204ENST00000496335 ADAM5Q6NVV9 412 aa12.72□□□□□ -0.37
PDAP1-204ENST00000496335 NIPAL3Q6P499 406 aa12.72□□□□□ -0.37
PDAP1-204ENST00000496335 C5orf46Q6UWT4 87 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms