RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 LRRTM2O43300 516 aa12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 IGHEP01854 428 aa12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 SBK2P0C263 348 aa12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 APEHP13798 732 aaKnown RBP12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 OTX2P32243 289 aa12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 ENTPD1P49961 510 aa12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 Q0VFX4 171 aa12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 ANKDD1AQ495B1 522 aa12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 C1orf140Q5VVS0 124 aa12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 OR51L1Q8NGJ5 315 aa12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 ISYNA1Q9NPH2 558 aa12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 VDAC3Q9Y277 283 aa12.38□□□□□ -0.43
SPTBN1-205ENST00000496323 SHISA8B8ZZ34 492 aa12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 TXNDC12O95881 172 aa12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 MT-ATP6P00846 226 aa12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 HIST1H2ABP04908 130 aa12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 F8A1P23610 371 aa12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 TCF15Q12870 199 aa12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 FOXF1Q12946 379 aa12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 DYNC1I2Q13409 638 aaKnown RBP12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 TPBGQ13641 420 aa12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 TRIP6Q15654 476 aaKnown RBP12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 FAM69AQ5T7M9 428 aa12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 ZNF322Q6U7Q0 402 aaPredicted RBP12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 IL20RBQ6UXL0 311 aa12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 HIST3H2AQ7L7L0 130 aa12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 KLHL36Q8N4N3 616 aa12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 OR52N1Q8NH53 320 aa12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 STK35Q8TDR2 534 aa12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 SPRYD4Q8WW59 207 aaPredicted RBP12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 HIST1H2ACQ93077 130 aa12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 SLC25A36Q96CQ1 311 aa12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 ZMYND19Q96E35 227 aaPredicted RBP12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 TSPAN32Q96QS1 320 aa12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 TBX5Q99593 518 aa12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 CDCP1Q9H5V8 836 aa12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 ISG20L2Q9H9L3 353 aaKnown RBP12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 ASB6Q9NWX5 421 aa12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 YARS2Q9Y2Z4 477 aaKnown RBP12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 PNMA8CA0A1B0GUJ8 204 aa12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 EFNA2O43921 213 aa12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 MSX1P28360 303 aa12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 SDHAP31040 664 aa12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 EIF3IQ13347 325 aaKnown RBP12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 SSPNQ14714 243 aa12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 TIMM50Q3ZCQ8 353 aa12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 USP43Q70EL4 1123 aa12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 ARMC10Q8N2F6 343 aa12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 ZFP41Q8N8Y5 198 aa12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 WDSUB1Q8N9V3 476 aa12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 LSM14AQ8ND56 463 aaKnown RBP12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 OR10H4Q8NGA5 316 aa12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 CPNE5Q9HCH3 593 aa12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 FBXL2Q9UKC9 423 aa12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 SLC6A5Q9Y345 797 aa12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 SF3B6Q9Y3B4 125 aaKnown RBP12.37□□□□□ -0.43
SPTBN1-205ENST00000496323 FTCDNL1E5RQL4 147 aa12.36□□□□□ -0.43
SPTBN1-205ENST00000496323 TERTO14746 1132 aaKnown RBP12.36□□□□□ -0.43
SPTBN1-205ENST00000496323 SERPINI2O75830 405 aa12.36□□□□□ -0.43
SPTBN1-205ENST00000496323 SPI1P17947 270 aa12.36□□□□□ -0.43
SPTBN1-205ENST00000496323 IL11P20809 199 aa12.36□□□□□ -0.43
SPTBN1-205ENST00000496323 PSMA1P25786 263 aaKnown RBP12.36□□□□□ -0.43
SPTBN1-205ENST00000496323 GRPRP30550 384 aa12.36□□□□□ -0.43
SPTBN1-205ENST00000496323 APOBEC1P41238 236 aaKnown RBP12.36□□□□□ -0.43
SPTBN1-205ENST00000496323 BMXP51813 675 aa12.36□□□□□ -0.43
SPTBN1-205ENST00000496323 MLF1P58340 268 aa12.36□□□□□ -0.43
SPTBN1-205ENST00000496323 TUBA1BP68363 451 aa12.36□□□□□ -0.43
SPTBN1-205ENST00000496323 DGUOKQ16854 277 aa12.36□□□□□ -0.43
SPTBN1-205ENST00000496323 PLPPR5Q32ZL2 321 aa12.36□□□□□ -0.43
SPTBN1-205ENST00000496323 PRAMEF20Q5VT98 475 aa12.36□□□□□ -0.43
SPTBN1-205ENST00000496323 LEG1Q6P5S2 330 aa12.36□□□□□ -0.43
SPTBN1-205ENST00000496323 OPN5Q6U736 354 aa12.36□□□□□ -0.43
SPTBN1-205ENST00000496323 TUBA1AQ71U36 451 aa12.36□□□□□ -0.43
SPTBN1-205ENST00000496323 MAMDC2Q7Z304 686 aaPredicted RBP12.36□□□□□ -0.43
SPTBN1-205ENST00000496323 RPS19BP1Q86WX3 136 aaKnown RBP12.36□□□□□ -0.43
SPTBN1-205ENST00000496323 EXD3Q8N9H8 876 aa12.36□□□□□ -0.43
SPTBN1-205ENST00000496323 OR2M3Q8NG83 312 aa12.36□□□□□ -0.43
SPTBN1-205ENST00000496323 POC1BQ8TC44 478 aa12.36□□□□□ -0.43
SPTBN1-205ENST00000496323 SMPDL3BQ92485 455 aa12.36□□□□□ -0.43
SPTBN1-205ENST00000496323 ARL5BQ96KC2 179 aa12.36□□□□□ -0.43
SPTBN1-205ENST00000496323 FRMD6Q96NE9 622 aa12.36□□□□□ -0.43
SPTBN1-205ENST00000496323 ALG8Q9BVK2 526 aa12.36□□□□□ -0.43
SPTBN1-205ENST00000496323 SH2D2AQ9NP31 389 aa12.36□□□□□ -0.43
SPTBN1-205ENST00000496323 SDHAF3Q9NRP4 125 aa12.36□□□□□ -0.43
SPTBN1-205ENST00000496323 STUB1Q9UNE7 303 aa12.36□□□□□ -0.43
SPTBN1-205ENST00000496323 CAB39Q9Y376 341 aaPredicted RBP12.36□□□□□ -0.43
SPTBN1-205ENST00000496323 FREM2Q5SZK8 3169 aa12.36□□□□□ -0.43
SPTBN1-205ENST00000496323 TP53I11O14683 189 aa12.35□□□□□ -0.43
SPTBN1-205ENST00000496323 TFP02787 698 aa12.35□□□□□ -0.43
SPTBN1-205ENST00000496323 DIO1P49895 249 aa12.35□□□□□ -0.43
SPTBN1-205ENST00000496323 SSR4P51571 173 aa12.35□□□□□ -0.43
SPTBN1-205ENST00000496323 ZNF85Q03923 595 aa12.35□□□□□ -0.43
SPTBN1-205ENST00000496323 ACSM1Q08AH1 577 aa12.35□□□□□ -0.43
SPTBN1-205ENST00000496323 GALEQ14376 348 aa12.35□□□□□ -0.43
SPTBN1-205ENST00000496323 GGTLC2Q14390 218 aa12.35□□□□□ -0.43
SPTBN1-205ENST00000496323 SGCBQ16585 318 aa12.35□□□□□ -0.43
SPTBN1-205ENST00000496323 MOGQ16653 247 aa12.35□□□□□ -0.43
SPTBN1-205ENST00000496323 MESTQ5EB52 335 aa12.35□□□□□ -0.43
SPTBN1-205ENST00000496323 SLC25A53Q5H9E4 307 aa12.35□□□□□ -0.43
SPTBN1-205ENST00000496323 ZNF468Q5VIY5 522 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms