RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 MFSD8Q8NHS3 518 aa13.49□□□□□ -0.25
GAPDH-210ENST00000496049 NEIL3Q8TAT5 605 aa13.49□□□□□ -0.25
GAPDH-210ENST00000496049 TEX47Q8TBZ9 253 aa13.49□□□□□ -0.25
GAPDH-210ENST00000496049 ZNF184Q99676 751 aaPredicted RBP13.49□□□□□ -0.25
GAPDH-210ENST00000496049 NPAS1Q99742 590 aa13.49□□□□□ -0.25
GAPDH-210ENST00000496049 SLC29A1Q99808 456 aa13.49□□□□□ -0.25
GAPDH-210ENST00000496049 TEX12Q9BXU0 123 aa13.49□□□□□ -0.25
GAPDH-210ENST00000496049 DEFB127Q9H1M4 99 aa13.49□□□□□ -0.25
GAPDH-210ENST00000496049 RIBC2Q9H4K1 309 aa13.49□□□□□ -0.25
GAPDH-210ENST00000496049 TIGARQ9NQ88 270 aa13.49□□□□□ -0.25
GAPDH-210ENST00000496049 TBC1D23Q9NUY8 699 aa13.49□□□□□ -0.25
GAPDH-210ENST00000496049 ALKBH4Q9NXW9 302 aa13.49□□□□□ -0.25
GAPDH-210ENST00000496049 PCNX3Q9H6A9 2034 aa13.49□□□□□ -0.25
GAPDH-210ENST00000496049 PRRC2CQ9Y520 2896 aaKnown RBP13.48□□□□□ -0.25
GAPDH-210ENST00000496049 WIPF3A6NGB9 483 aa13.48□□□□□ -0.25
GAPDH-210ENST00000496049 SEC14L5O43304 696 aa13.48□□□□□ -0.25
GAPDH-210ENST00000496049 KLF4O43474 513 aa13.48□□□□□ -0.25
GAPDH-210ENST00000496049 RCBTB2O95199 551 aa13.48□□□□□ -0.25
GAPDH-210ENST00000496049 OR6A2O95222 327 aa13.48□□□□□ -0.25
GAPDH-210ENST00000496049 PMS2P2O95744 297 aa13.48□□□□□ -0.25
GAPDH-210ENST00000496049 IGHG3P01860 377 aa13.48□□□□□ -0.25
GAPDH-210ENST00000496049 OSMP13725 252 aa13.48□□□□□ -0.25
GAPDH-210ENST00000496049 MAKP20794 623 aa13.48□□□□□ -0.25
GAPDH-210ENST00000496049 IL11P20809 199 aa13.48□□□□□ -0.25
GAPDH-210ENST00000496049 AQP4P55087 323 aa13.48□□□□□ -0.25
GAPDH-210ENST00000496049 RPS3AP61247 264 aaKnown RBP13.48□□□□□ -0.25
GAPDH-210ENST00000496049 ESRRGP62508 458 aa13.48□□□□□ -0.25
GAPDH-210ENST00000496049 SLC35A1P78382 337 aa13.48□□□□□ -0.25
GAPDH-210ENST00000496049 KLRB1Q12918 225 aa13.48□□□□□ -0.25
GAPDH-210ENST00000496049 OR7A5Q15622 319 aa13.48□□□□□ -0.25
GAPDH-210ENST00000496049 NHSL2Q5HYW2 709 aa13.48□□□□□ -0.25
GAPDH-210ENST00000496049 RNFT1Q5M7Z0 435 aa13.48□□□□□ -0.25
GAPDH-210ENST00000496049 KLHL17Q6TDP4 642 aa13.48□□□□□ -0.25
GAPDH-210ENST00000496049 RASSF6Q6ZTQ3 369 aa13.48□□□□□ -0.25
GAPDH-210ENST00000496049 CLDN22Q8N7P3 220 aa13.48□□□□□ -0.25
GAPDH-210ENST00000496049 SCAIQ8N9R8 606 aa13.48□□□□□ -0.25
GAPDH-210ENST00000496049 OR13C2Q8NGS9 318 aa13.48□□□□□ -0.25
GAPDH-210ENST00000496049 OSTF1Q92882 214 aa13.48□□□□□ -0.25
GAPDH-210ENST00000496049 ABTB1Q969K4 478 aaPredicted RBP13.48□□□□□ -0.25
GAPDH-210ENST00000496049 TAAR8Q969N4 342 aa13.48□□□□□ -0.25
GAPDH-210ENST00000496049 SLC25A36Q96CQ1 311 aa13.48□□□□□ -0.25
GAPDH-210ENST00000496049 PTDSS2Q9BVG9 487 aa13.48□□□□□ -0.25
GAPDH-210ENST00000496049 GABARAPL3Q9BY60 117 aa13.48□□□□□ -0.25
GAPDH-210ENST00000496049 Q9H521 79 aa13.48□□□□□ -0.25
GAPDH-210ENST00000496049 LUZP4Q9P127 313 aa13.48□□□□□ -0.25
GAPDH-210ENST00000496049 SLC6A5Q9Y345 797 aa13.48□□□□□ -0.25
GAPDH-210ENST00000496049 CDH10Q9Y6N8 788 aa13.48□□□□□ -0.25
GAPDH-210ENST00000496049 SHANK1Q9Y566 2161 aa13.48□□□□□ -0.25
GAPDH-210ENST00000496049 ABCA2Q9BZC7 2435 aa13.48□□□□□ -0.25
GAPDH-210ENST00000496049 AKAP9Q99996 3911 aa13.47□□□□□ -0.25
GAPDH-210ENST00000496049 NPIPA5E9PKD4 350 aa13.47□□□□□ -0.25
GAPDH-210ENST00000496049 SULT2B1O00204 365 aa13.47□□□□□ -0.25
GAPDH-210ENST00000496049 EIF1AYO14602 144 aaKnown RBP13.47□□□□□ -0.25
GAPDH-210ENST00000496049 DNPH1O43598 174 aa13.47□□□□□ -0.25
GAPDH-210ENST00000496049 BGLAPP02818 100 aa13.47□□□□□ -0.25
GAPDH-210ENST00000496049 BMP7P18075 431 aa13.47□□□□□ -0.25
GAPDH-210ENST00000496049 FUT1P19526 365 aa13.47□□□□□ -0.25
GAPDH-210ENST00000496049 OR2B6P58173 313 aa13.47□□□□□ -0.25
GAPDH-210ENST00000496049 PRPS1P60891 318 aa13.47□□□□□ -0.25
GAPDH-210ENST00000496049 LSM11P83369 360 aaKnown RBP eCLIP13.47□□□□□ -0.25
GAPDH-210ENST00000496049 BCL2A1Q16548 175 aa13.47□□□□□ -0.25
GAPDH-210ENST00000496049 ZBED5Q49AG3 693 aa13.47□□□□□ -0.25
GAPDH-210ENST00000496049 CMPK2Q5EBM0 449 aa13.47□□□□□ -0.25
GAPDH-210ENST00000496049 ZNF620Q6ZNG0 422 aa13.47□□□□□ -0.25
GAPDH-210ENST00000496049 TRILQ7L0X0 811 aa13.47□□□□□ -0.25
GAPDH-210ENST00000496049 SLC46A3Q7Z3Q1 461 aa13.47□□□□□ -0.25
GAPDH-210ENST00000496049 MEX3DQ86XN8 651 aaKnown RBP13.47□□□□□ -0.25
GAPDH-210ENST00000496049 UBQLNLQ8IYU4 475 aa13.47□□□□□ -0.25
GAPDH-210ENST00000496049 LIPHQ8WWY8 451 aa13.47□□□□□ -0.25
GAPDH-210ENST00000496049 POM121Q96HA1 1249 aa13.47□□□□□ -0.25
GAPDH-210ENST00000496049 TAAR6Q96RI8 345 aa13.47□□□□□ -0.25
GAPDH-210ENST00000496049 PRRG3Q9BZD7 231 aa13.47□□□□□ -0.25
GAPDH-210ENST00000496049 TSPAN10Q9H1Z9 355 aaPredicted RBP13.47□□□□□ -0.25
GAPDH-210ENST00000496049 TOR3AQ9H497 397 aa13.47□□□□□ -0.25
GAPDH-210ENST00000496049 PAQR5Q9NXK6 330 aaPredicted RBP13.47□□□□□ -0.25
GAPDH-210ENST00000496049 TMEFF2Q9UIK5 374 aaPredicted RBP13.47□□□□□ -0.25
GAPDH-210ENST00000496049 NPIPA1Q9UND3 350 aa13.47□□□□□ -0.25
GAPDH-210ENST00000496049 TRAPPC4Q9Y296 219 aa13.47□□□□□ -0.25
GAPDH-210ENST00000496049 TRAV27A0A087WT01 109 aa13.46□□□□□ -0.25
GAPDH-210ENST00000496049 LIPT2A6NK58 231 aa13.46□□□□□ -0.25
GAPDH-210ENST00000496049 AQP7O14520 342 aa13.46□□□□□ -0.25
GAPDH-210ENST00000496049 CDC42EP2O14613 210 aa13.46□□□□□ -0.25
GAPDH-210ENST00000496049 TNFSF11O14788 317 aa13.46□□□□□ -0.25
GAPDH-210ENST00000496049 EFNA2O43921 213 aa13.46□□□□□ -0.25
GAPDH-210ENST00000496049 EIF1BO60739 113 aaKnown RBP13.46□□□□□ -0.25
GAPDH-210ENST00000496049 MITFO75030 526 aaPredicted RBP13.46□□□□□ -0.25
GAPDH-210ENST00000496049 SOX14O95416 240 aa13.46□□□□□ -0.25
GAPDH-210ENST00000496049 SNAP29O95721 258 aa13.46□□□□□ -0.25
GAPDH-210ENST00000496049 ASAH2BP0C7U1 165 aa13.46□□□□□ -0.25
GAPDH-210ENST00000496049 POU1F1P28069 291 aa13.46□□□□□ -0.25
GAPDH-210ENST00000496049 SLC6A6P31641 620 aa13.46□□□□□ -0.25
GAPDH-210ENST00000496049 DIO1P49895 249 aa13.46□□□□□ -0.25
GAPDH-210ENST00000496049 PMS2P3Q13401 168 aa13.46□□□□□ -0.25
GAPDH-210ENST00000496049 SGCBQ16585 318 aa13.46□□□□□ -0.25
GAPDH-210ENST00000496049 SLC36A3Q495N2 470 aa13.46□□□□□ -0.25
GAPDH-210ENST00000496049 HBMQ6B0K9 141 aa13.46□□□□□ -0.25
GAPDH-210ENST00000496049 ARHGAP11AQ6P4F7 1023 aa13.46□□□□□ -0.25
GAPDH-210ENST00000496049 SMARCD3Q6STE5 483 aa13.46□□□□□ -0.25
GAPDH-210ENST00000496049 TMPPEQ6ZT21 453 aa13.46□□□□□ -0.25
GAPDH-210ENST00000496049 CHMP1BQ7LBR1 199 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms