RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 FKRPQ9H9S5 495 aa15.26■□□□□ 0.03
HDAC6-235ENST00000495515 BCO1Q9HAY6 547 aa15.26■□□□□ 0.03
HDAC6-235ENST00000495515 KRCC1Q9NPI7 259 aaPredicted RBP15.26■□□□□ 0.03
HDAC6-235ENST00000495515 NANSQ9NR45 359 aa15.26■□□□□ 0.03
HDAC6-235ENST00000495515 MAN2C1Q9NTJ4 1040 aa15.26■□□□□ 0.03
HDAC6-235ENST00000495515 KLHL13Q9P2N7 655 aa15.26■□□□□ 0.03
HDAC6-235ENST00000495515 RASD1Q9Y272 281 aa15.26■□□□□ 0.03
HDAC6-235ENST00000495515 TESMINQ9Y4I5 508 aa15.26■□□□□ 0.03
HDAC6-235ENST00000495515 MYO7BQ6PIF6 2116 aa15.25■□□□□ 0.03
HDAC6-235ENST00000495515 TCRBV3S1A0A5B6 114 aa15.25■□□□□ 0.03
HDAC6-235ENST00000495515 ENO4A6NNW6 628 aa15.25■□□□□ 0.03
HDAC6-235ENST00000495515 ZNF724A8MTY0 619 aa15.25■□□□□ 0.03
HDAC6-235ENST00000495515 FZD7O75084 574 aa15.25■□□□□ 0.03
HDAC6-235ENST00000495515 GADD45GO95257 159 aa15.25■□□□□ 0.03
HDAC6-235ENST00000495515 CH25HO95992 272 aa15.25■□□□□ 0.03
HDAC6-235ENST00000495515 BGLAPP02818 100 aa15.25■□□□□ 0.03
HDAC6-235ENST00000495515 NQO1P15559 274 aaKnown RBP15.25■□□□□ 0.03
HDAC6-235ENST00000495515 GRPRP30550 384 aa15.25■□□□□ 0.03
HDAC6-235ENST00000495515 SLC16A1P53985 500 aa15.25■□□□□ 0.03
HDAC6-235ENST00000495515 UGT2B15P54855 530 aa15.25■□□□□ 0.03
HDAC6-235ENST00000495515 SIRPAP78324 504 aa15.25■□□□□ 0.03
HDAC6-235ENST00000495515 FOXF2Q12947 444 aa15.25■□□□□ 0.03
HDAC6-235ENST00000495515 ZNF74Q16587 644 aa15.25■□□□□ 0.03
HDAC6-235ENST00000495515 CCDC103Q8IW40 242 aa15.25■□□□□ 0.03
HDAC6-235ENST00000495515 ADPRHL1Q8NDY3 354 aa15.25■□□□□ 0.03
HDAC6-235ENST00000495515 OR6K3Q8NGY3 331 aa15.25■□□□□ 0.03
HDAC6-235ENST00000495515 CANT1Q8WVQ1 401 aa15.25■□□□□ 0.03
HDAC6-235ENST00000495515 SGTBQ96EQ0 304 aa15.25■□□□□ 0.03
HDAC6-235ENST00000495515 DHRS1Q96LJ7 313 aa15.25■□□□□ 0.03
HDAC6-235ENST00000495515 PSD2Q9BQI7 771 aa15.25■□□□□ 0.03
HDAC6-235ENST00000495515 CHID1Q9BWS9 393 aa15.25■□□□□ 0.03
HDAC6-235ENST00000495515 CHST11Q9NPF2 352 aa15.25■□□□□ 0.03
HDAC6-235ENST00000495515 KCNJ16Q9NPI9 418 aa15.25■□□□□ 0.03
HDAC6-235ENST00000495515 MRPL39Q9NYK5 338 aaKnown RBP15.25■□□□□ 0.03
HDAC6-235ENST00000495515 ZNF229Q9UJW7 825 aa15.25■□□□□ 0.03
HDAC6-235ENST00000495515 TMCC3Q9ULS5 477 aa15.25■□□□□ 0.03
HDAC6-235ENST00000495515 CLEC4AQ9UMR7 237 aa15.25■□□□□ 0.03
HDAC6-235ENST00000495515 IGKV3D-15A0A087WSY6 115 aa15.24■□□□□ 0.03
HDAC6-235ENST00000495515 M0R082 166 aa15.24■□□□□ 0.03
HDAC6-235ENST00000495515 TNFSF13O75888 250 aa15.24■□□□□ 0.03
HDAC6-235ENST00000495515 OR6A2O95222 327 aa15.24■□□□□ 0.03
HDAC6-235ENST00000495515 IFI30P13284 250 aa15.24■□□□□ 0.03
HDAC6-235ENST00000495515 AGTR1P30556 359 aa15.24■□□□□ 0.03
HDAC6-235ENST00000495515 RRM2P31350 389 aa15.24■□□□□ 0.03
HDAC6-235ENST00000495515 KIR2DL2P43627 348 aaPredicted RBP15.24■□□□□ 0.03
HDAC6-235ENST00000495515 PMS2P3Q13401 168 aa15.24■□□□□ 0.03
HDAC6-235ENST00000495515 GUSBP1Q15486 140 aa15.24■□□□□ 0.03
HDAC6-235ENST00000495515 ZSCAN26Q16670 478 aa15.24■□□□□ 0.03
HDAC6-235ENST00000495515 MBOAT2Q6ZWT7 520 aa15.24■□□□□ 0.03
HDAC6-235ENST00000495515 GALNT5Q7Z7M9 940 aa15.24■□□□□ 0.03
HDAC6-235ENST00000495515 GPAT4Q86UL3 456 aa15.24■□□□□ 0.03
HDAC6-235ENST00000495515 TUSC5Q8IXB3 177 aa15.24■□□□□ 0.03
HDAC6-235ENST00000495515 OR5J2Q8NH18 312 aa15.24■□□□□ 0.03
HDAC6-235ENST00000495515 OR52J3Q8NH60 311 aa15.24■□□□□ 0.03
HDAC6-235ENST00000495515 PFN4Q8NHR9 129 aa15.24■□□□□ 0.03
HDAC6-235ENST00000495515 ZNF417Q8TAU3 575 aa15.24■□□□□ 0.03
HDAC6-235ENST00000495515 SLC7A13Q8TCU3 470 aa15.24■□□□□ 0.03
HDAC6-235ENST00000495515 ZNF587Q96SQ5 575 aaPredicted RBP15.24■□□□□ 0.03
HDAC6-235ENST00000495515 MEPEQ9NQ76 525 aaPredicted RBP15.24■□□□□ 0.03
HDAC6-235ENST00000495515 PROCRQ9UNN8 238 aa15.24■□□□□ 0.03
HDAC6-235ENST00000495515 TMEM5Q9Y2B1 443 aa15.24■□□□□ 0.03
HDAC6-235ENST00000495515 PHF3Q92576 2039 aaKnown RBP15.23■□□□□ 0.03
HDAC6-235ENST00000495515 A0A087WUU8 490 aa15.23■□□□□ 0.03
HDAC6-235ENST00000495515 FAM90A27PA6NNH2 459 aa15.23■□□□□ 0.03
HDAC6-235ENST00000495515 KLK2P20151 261 aa15.23■□□□□ 0.03
HDAC6-235ENST00000495515 CBLP22681 906 aa15.23■□□□□ 0.03
HDAC6-235ENST00000495515 IFNGR2P38484 337 aa15.23■□□□□ 0.03
HDAC6-235ENST00000495515 IL1RL1Q01638 556 aa15.23■□□□□ 0.03
HDAC6-235ENST00000495515 LTBQ06643 244 aa15.23■□□□□ 0.03
HDAC6-235ENST00000495515 GK3PQ14409 553 aa15.23■□□□□ 0.03
HDAC6-235ENST00000495515 SLC17A1Q14916 467 aa15.23■□□□□ 0.03
HDAC6-235ENST00000495515 OR2T5Q6IEZ7 315 aa15.23■□□□□ 0.03
HDAC6-235ENST00000495515 PODNL1Q6PEZ8 512 aa15.23■□□□□ 0.03
HDAC6-235ENST00000495515 STK32CQ86UX6 486 aa15.23■□□□□ 0.03
HDAC6-235ENST00000495515 LIX1LQ8IVB5 337 aa15.23■□□□□ 0.03
HDAC6-235ENST00000495515 NRMQ8IXM6 262 aa15.23■□□□□ 0.03
HDAC6-235ENST00000495515 C10orf67Q8IYJ2 551 aa15.23■□□□□ 0.03
HDAC6-235ENST00000495515 OR2T29Q8NH02 315 aa15.23■□□□□ 0.03
HDAC6-235ENST00000495515 UTP4Q969X6 686 aaKnown RBP15.23■□□□□ 0.03
HDAC6-235ENST00000495515 STARD4Q96DR4 205 aa15.23■□□□□ 0.03
HDAC6-235ENST00000495515 BPIFA2Q96DR5 249 aa15.23■□□□□ 0.03
HDAC6-235ENST00000495515 OXGR1Q96P68 337 aa15.23■□□□□ 0.03
HDAC6-235ENST00000495515 MOGAT1Q96PD6 335 aa15.23■□□□□ 0.03
HDAC6-235ENST00000495515 REEP1Q9H902 201 aa15.23■□□□□ 0.03
HDAC6-235ENST00000495515 FANCFQ9NPI8 374 aa15.23■□□□□ 0.03
HDAC6-235ENST00000495515 CCM2LQ9NUG4 571 aaPredicted RBP15.23■□□□□ 0.03
HDAC6-235ENST00000495515 PARPBPQ9NWS1 579 aa15.23■□□□□ 0.03
HDAC6-235ENST00000495515 PTPN13Q12923 2485 aa15.23■□□□□ 0.03
HDAC6-235ENST00000495515 LOC102725191A0A1B0GVB3 256 aa15.22■□□□□ 0.03
HDAC6-235ENST00000495515 ZNF716A6NP11 495 aa15.22■□□□□ 0.03
HDAC6-235ENST00000495515 ZNF814B7Z6K7 855 aa15.22■□□□□ 0.03
HDAC6-235ENST00000495515 EEF1E1-BLOC1S5C9J1V9 151 aa15.22■□□□□ 0.03
HDAC6-235ENST00000495515 TNFRSF11BO00300 401 aa15.22■□□□□ 0.03
HDAC6-235ENST00000495515 GNGT2O14610 69 aa15.22■□□□□ 0.03
HDAC6-235ENST00000495515 MSTNO14793 375 aa15.22■□□□□ 0.03
HDAC6-235ENST00000495515 EEF1E1O43324 174 aaKnown RBP15.22■□□□□ 0.03
HDAC6-235ENST00000495515 SMNDC1O75940 238 aaKnown RBP eCLIP15.22■□□□□ 0.03
HDAC6-235ENST00000495515 OR7A10O76100 309 aa15.22■□□□□ 0.03
HDAC6-235ENST00000495515 CD8BP10966 210 aa15.22■□□□□ 0.03
HDAC6-235ENST00000495515 ZNF43P17038 809 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms