RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 DMRTC1Q5HYR2 192 aa2.16□□□□□ -2.06
VPS50-219ENST00000495039 CFAP157Q5JU67 520 aa2.16□□□□□ -2.06
VPS50-219ENST00000495039 ATAD3BQ5T9A4 648 aa2.16□□□□□ -2.06
VPS50-219ENST00000495039 GPR157Q5UAW9 335 aa2.16□□□□□ -2.06
VPS50-219ENST00000495039 OR52E8Q6IFG1 317 aa2.16□□□□□ -2.06
VPS50-219ENST00000495039 C6orf89Q6UWU4 347 aa2.16□□□□□ -2.06
VPS50-219ENST00000495039 ACP7Q6ZNF0 438 aa2.16□□□□□ -2.06
VPS50-219ENST00000495039 GET4Q7L5D6 327 aaPredicted RBP2.16□□□□□ -2.06
VPS50-219ENST00000495039 PRSS41Q7RTY9 318 aa2.16□□□□□ -2.06
VPS50-219ENST00000495039 ZNF786Q8N393 782 aa2.16□□□□□ -2.06
VPS50-219ENST00000495039 MDS2Q8NDY4 140 aa2.16□□□□□ -2.06
VPS50-219ENST00000495039 OR2T3Q8NH03 318 aa2.16□□□□□ -2.06
VPS50-219ENST00000495039 OR6X1Q8NH79 312 aa2.16□□□□□ -2.06
VPS50-219ENST00000495039 ARPC1AQ92747 370 aa2.16□□□□□ -2.06
VPS50-219ENST00000495039 EMG1Q92979 244 aaKnown RBP2.16□□□□□ -2.06
VPS50-219ENST00000495039 UBE2E3Q969T4 207 aa2.16□□□□□ -2.06
VPS50-219ENST00000495039 OR2M2Q96R28 347 aa2.16□□□□□ -2.06
VPS50-219ENST00000495039 MRPL45Q9BRJ2 306 aaKnown RBP2.16□□□□□ -2.06
VPS50-219ENST00000495039 ERP44Q9BS26 406 aa2.16□□□□□ -2.06
VPS50-219ENST00000495039 ACTR6Q9GZN1 396 aa2.16□□□□□ -2.06
VPS50-219ENST00000495039 THUMPD1Q9NXG2 353 aaKnown RBP2.16□□□□□ -2.06
VPS50-219ENST00000495039 HOXC10Q9NYD6 342 aa2.16□□□□□ -2.06
VPS50-219ENST00000495039 POLDIP2Q9Y2S7 368 aa2.16□□□□□ -2.06
VPS50-219ENST00000495039 ATP6V0A2Q9Y487 856 aa2.16□□□□□ -2.06
VPS50-219ENST00000495039 TIMM10BQ9Y5J6 103 aa2.16□□□□□ -2.06
VPS50-219ENST00000495039 WSB1Q9Y6I7 421 aa2.16□□□□□ -2.06
VPS50-219ENST00000495039 NSG1A0A0A6YYJ2 146 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 A0A0G2JN53 185 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 IQANK1A0A1B0GTG1 560 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 TCRBV9S1A1TA0A576 114 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 A8MXQ7 604 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 MED7O43513 233 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 GMFGO60234 142 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 DIRAS1O95057 198 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 OXSR1O95747 527 aaPredicted RBP2.15□□□□□ -2.07
VPS50-219ENST00000495039 SLC25A27O95847 323 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 PCCAP05165 728 aaPredicted RBP2.15□□□□□ -2.07
VPS50-219ENST00000495039 PNMA6AP0CW24 399 aaPredicted RBP2.15□□□□□ -2.07
VPS50-219ENST00000495039 ZNF44P15621 663 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 CRISP2P16562 243 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 NPR2P20594 1047 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 PCMT1P22061 227 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 RDXP35241 583 aaKnown RBP2.15□□□□□ -2.07
VPS50-219ENST00000495039 DDOSTP39656 456 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 PPOXP50336 477 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 EFNB2P52799 333 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 TNFRSF17Q02223 184 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 VGLL4Q14135 290 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 C1orf220Q5T0J3 134 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 OR2G6Q5TZ20 316 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 ZNF620Q6ZNG0 422 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 PGAP1Q75T13 922 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 NLRP9Q7RTR0 991 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 PAQR7Q86WK9 346 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 VSTM4Q8IW00 320 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 GMCL1P1Q8NEA9 526 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 MARCH1Q8TCQ1 289 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 TM4SF19Q96DZ7 209 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 FAM210BQ96KR6 192 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 FCRL1Q96LA6 429 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 RBM14Q96PK6 669 aaKnown RBP2.15□□□□□ -2.07
VPS50-219ENST00000495039 CLCC1Q96S66 551 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 RNF2Q99496 336 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 EML4Q9HC35 981 aaKnown RBP2.15□□□□□ -2.07
VPS50-219ENST00000495039 KCNIP1Q9NZI2 227 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 C6orf203Q9P0P8 240 aaPredicted RBP2.15□□□□□ -2.07
VPS50-219ENST00000495039 SEC14L3Q9UDX4 400 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 ZNF223Q9UK11 482 aaPredicted RBP2.15□□□□□ -2.07
VPS50-219ENST00000495039 BLOC1S6Q9UL45 172 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 TMCO1Q9UM00 188 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 TP53TG5Q9Y2B4 290 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 PRG3Q9Y2Y8 225 aaPredicted RBP2.15□□□□□ -2.07
VPS50-219ENST00000495039 PDS5BQ9NTI5 1447 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 ASTN1O14525 1302 aa2.15□□□□□ -2.07
VPS50-219ENST00000495039 ATP10AO60312 1499 aa2.14□□□□□ -2.07
VPS50-219ENST00000495039 H0YCG3 227 aa2.14□□□□□ -2.07
VPS50-219ENST00000495039 LAD1O00515 517 aa2.14□□□□□ -2.07
VPS50-219ENST00000495039 PES1O00541 588 aaKnown RBP2.14□□□□□ -2.07
VPS50-219ENST00000495039 ICOSLGO75144 302 aa2.14□□□□□ -2.07
VPS50-219ENST00000495039 MOSP00540 346 aa2.14□□□□□ -2.07
VPS50-219ENST00000495039 HPGDP15428 266 aa2.14□□□□□ -2.07
VPS50-219ENST00000495039 CMA1P23946 247 aa2.14□□□□□ -2.07
VPS50-219ENST00000495039 IL12AP29459 219 aa2.14□□□□□ -2.07
VPS50-219ENST00000495039 GRIA1P42261 906 aa2.14□□□□□ -2.07
VPS50-219ENST00000495039 IFNAR2P48551 515 aa2.14□□□□□ -2.07
VPS50-219ENST00000495039 GSSP48637 474 aa2.14□□□□□ -2.07
VPS50-219ENST00000495039 SUCLG1P53597 346 aaKnown RBP2.14□□□□□ -2.07
VPS50-219ENST00000495039 HERVK_113P61574 105 aa2.14□□□□□ -2.07
VPS50-219ENST00000495039 KLRB1Q12918 225 aa2.14□□□□□ -2.07
VPS50-219ENST00000495039 DUSP7Q16829 419 aa2.14□□□□□ -2.07
VPS50-219ENST00000495039 CCDC152Q4G0S7 254 aa2.14□□□□□ -2.07
VPS50-219ENST00000495039 SFT2D3Q587I9 215 aa2.14□□□□□ -2.07
VPS50-219ENST00000495039 CARD16Q5EG05 197 aa2.14□□□□□ -2.07
VPS50-219ENST00000495039 OR4F3Q6IEY1 312 aa2.14□□□□□ -2.07
VPS50-219ENST00000495039 COX15Q7KZN9 410 aa2.14□□□□□ -2.07
VPS50-219ENST00000495039 TMEM61Q8N0U2 210 aa2.14□□□□□ -2.07
VPS50-219ENST00000495039 OR52H1Q8NGJ2 320 aa2.14□□□□□ -2.07
VPS50-219ENST00000495039 OR51G1Q8NGK1 321 aa2.14□□□□□ -2.07
VPS50-219ENST00000495039 UFD1Q92890 307 aa2.14□□□□□ -2.07
VPS50-219ENST00000495039 CXorf40BQ96DE9 158 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms