RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 RASD1Q9Y272 281 aa20.27■□□□□ 0.84
COL27A1-208ENST00000494780 FKBP7Q9Y680 259 aa20.27■□□□□ 0.84
COL27A1-208ENST00000494780 IGHV1-18A0A0C4DH31 117 aa20.26■□□□□ 0.83
COL27A1-208ENST00000494780 NPIPB7O75200 414 aa20.26■□□□□ 0.83
COL27A1-208ENST00000494780 LY6HO94772 140 aa20.26■□□□□ 0.83
COL27A1-208ENST00000494780 NCF2P19878 526 aaPredicted RBP20.26■□□□□ 0.83
COL27A1-208ENST00000494780 PDLIM4P50479 330 aa20.26■□□□□ 0.83
COL27A1-208ENST00000494780 DSTNP60981 165 aa20.26■□□□□ 0.83
COL27A1-208ENST00000494780 CLIP4Q8N3C7 705 aa20.26■□□□□ 0.83
COL27A1-208ENST00000494780 ZNF317Q96PQ6 595 aaPredicted RBP20.26■□□□□ 0.83
COL27A1-208ENST00000494780 KCNS3Q9BQ31 491 aa20.26■□□□□ 0.83
COL27A1-208ENST00000494780 KATNB1Q9BVA0 655 aa20.26■□□□□ 0.83
COL27A1-208ENST00000494780 SPATA9Q9BWV2 254 aa20.26■□□□□ 0.83
COL27A1-208ENST00000494780 PARD6BQ9BYG5 372 aa20.26■□□□□ 0.83
COL27A1-208ENST00000494780 TPT1P8Q9HAU6 139 aa20.26■□□□□ 0.83
COL27A1-208ENST00000494780 CACYBPQ9HB71 228 aaKnown RBP20.26■□□□□ 0.83
COL27A1-208ENST00000494780 THUMPD1Q9NXG2 353 aaKnown RBP20.26■□□□□ 0.83
COL27A1-208ENST00000494780 A0A0G2JPF8 293 aa20.25■□□□□ 0.83
COL27A1-208ENST00000494780 VWC2LB2RUY7 222 aa20.25■□□□□ 0.83
COL27A1-208ENST00000494780 HNRNPCL2B2RXH8 293 aa20.25■□□□□ 0.83
COL27A1-208ENST00000494780 HNRNPCL3B7ZW38 293 aa20.25■□□□□ 0.83
COL27A1-208ENST00000494780 SLCO1B7G3V0H7 640 aa20.25■□□□□ 0.83
COL27A1-208ENST00000494780 NDUFS8O00217 210 aa20.25■□□□□ 0.83
COL27A1-208ENST00000494780 PHF1O43189 567 aaPredicted RBP20.25■□□□□ 0.83
COL27A1-208ENST00000494780 HNRNPCL1O60812 293 aaKnown RBP20.25■□□□□ 0.83
COL27A1-208ENST00000494780 SNNO75324 88 aaPredicted RBP20.25■□□□□ 0.83
COL27A1-208ENST00000494780 ANP32DO95626 131 aa20.25■□□□□ 0.83
COL27A1-208ENST00000494780 LGI1O95970 557 aa20.25■□□□□ 0.83
COL27A1-208ENST00000494780 HNRNPCL4P0DMR1 293 aa20.25■□□□□ 0.83
COL27A1-208ENST00000494780 GZMKP49863 264 aa20.25■□□□□ 0.83
COL27A1-208ENST00000494780 SELENOPP49908 381 aa20.25■□□□□ 0.83
COL27A1-208ENST00000494780 UBE2NP61088 152 aaKnown RBP20.25■□□□□ 0.83
COL27A1-208ENST00000494780 SNRPD2P62316 118 aaKnown RBP20.25■□□□□ 0.83
COL27A1-208ENST00000494780 PRAMEF8Q5VWM4 474 aa20.25■□□□□ 0.83
COL27A1-208ENST00000494780 PRAMEF7Q5VXH5 474 aa20.25■□□□□ 0.83
COL27A1-208ENST00000494780 NXNQ6DKJ4 435 aa20.25■□□□□ 0.83
COL27A1-208ENST00000494780 MSANTD1Q6ZTZ1 278 aa20.25■□□□□ 0.83
COL27A1-208ENST00000494780 ANKRD42Q8N9B4 389 aa20.25■□□□□ 0.83
COL27A1-208ENST00000494780 MAGEE2Q8TD90 523 aaPredicted RBP20.25■□□□□ 0.83
COL27A1-208ENST00000494780 STK35Q8TDR2 534 aa20.25■□□□□ 0.83
COL27A1-208ENST00000494780 BCL2L2Q92843 193 aaPredicted RBP20.25■□□□□ 0.83
COL27A1-208ENST00000494780 C3orf49Q96BT1 292 aa20.25■□□□□ 0.83
COL27A1-208ENST00000494780 RMND5AQ9H871 391 aa20.25■□□□□ 0.83
COL27A1-208ENST00000494780 MOV10Q9HCE1 1003 aaKnown RBP20.25■□□□□ 0.83
COL27A1-208ENST00000494780 CUBNO60494 3623 aa20.25■□□□□ 0.83
COL27A1-208ENST00000494780 ARFGEF3Q5TH69 2177 aa20.24■□□□□ 0.83
COL27A1-208ENST00000494780 ARPC4-TTLL3A0A0A6YYG9 625 aa20.24■□□□□ 0.83
COL27A1-208ENST00000494780 TMEM247A6NEH6 219 aa20.24■□□□□ 0.83
COL27A1-208ENST00000494780 TMEM229AB2RXF0 380 aa20.24■□□□□ 0.83
COL27A1-208ENST00000494780 CRYAAP02489 173 aa20.24■□□□□ 0.83
COL27A1-208ENST00000494780 KITP10721 976 aa20.24■□□□□ 0.83
COL27A1-208ENST00000494780 PRG2P13727 222 aa20.24■□□□□ 0.83
COL27A1-208ENST00000494780 ZNF16P17020 682 aaPredicted RBP20.24■□□□□ 0.83
COL27A1-208ENST00000494780 SERPINF1P36955 418 aa20.24■□□□□ 0.83
COL27A1-208ENST00000494780 WDR4P57081 412 aaKnown RBP20.24■□□□□ 0.83
COL27A1-208ENST00000494780 C3orf36Q3SXR2 165 aa20.24■□□□□ 0.83
COL27A1-208ENST00000494780 RPS26P11Q5JNZ5 115 aaPredicted RBP20.24■□□□□ 0.83
COL27A1-208ENST00000494780 NIPAL3Q6P499 406 aa20.24■□□□□ 0.83
COL27A1-208ENST00000494780 EPHX4Q8IUS5 362 aa20.24■□□□□ 0.83
COL27A1-208ENST00000494780 MFSD8Q8NHS3 518 aa20.24■□□□□ 0.83
COL27A1-208ENST00000494780 TMEM19Q96HH6 336 aa20.24■□□□□ 0.83
COL27A1-208ENST00000494780 ITCHQ96J02 903 aa20.24■□□□□ 0.83
COL27A1-208ENST00000494780 MAELQ96JY0 434 aaKnown RBP20.24■□□□□ 0.83
COL27A1-208ENST00000494780 SORCS2Q96PQ0 1159 aa20.24■□□□□ 0.83
COL27A1-208ENST00000494780 ALKBH3Q96Q83 286 aaPredicted RBP20.24■□□□□ 0.83
COL27A1-208ENST00000494780 PIMREGQ9BSJ6 248 aa20.24■□□□□ 0.83
COL27A1-208ENST00000494780 LINC00470Q9BZP3 86 aa20.24■□□□□ 0.83
COL27A1-208ENST00000494780 SHARPINQ9H0F6 387 aa20.24■□□□□ 0.83
COL27A1-208ENST00000494780 MYOZ1Q9NP98 299 aaPredicted RBP20.24■□□□□ 0.83
COL27A1-208ENST00000494780 CA10Q9NS85 328 aa20.24■□□□□ 0.83
COL27A1-208ENST00000494780 ZIM2Q9NZV7 527 aa20.24■□□□□ 0.83
COL27A1-208ENST00000494780 CRNNQ9UBG3 495 aaPredicted RBP20.24■□□□□ 0.83
COL27A1-208ENST00000494780 IFT52Q9Y366 437 aa20.24■□□□□ 0.83
COL27A1-208ENST00000494780 CHST2Q9Y4C5 530 aa20.24■□□□□ 0.83
COL27A1-208ENST00000494780 B9A039 149 aa20.23■□□□□ 0.83
COL27A1-208ENST00000494780 LMX1BO60663 402 aa20.23■□□□□ 0.83
COL27A1-208ENST00000494780 AHSA1O95433 338 aa20.23■□□□□ 0.83
COL27A1-208ENST00000494780 HOXB1P14653 301 aaPredicted RBP20.23■□□□□ 0.83
COL27A1-208ENST00000494780 LGALS3BPQ08380 585 aa20.23■□□□□ 0.83
COL27A1-208ENST00000494780 SERPINA11Q86U17 422 aa20.23■□□□□ 0.83
COL27A1-208ENST00000494780 UPK3AO75631 287 aa20.22■□□□□ 0.83
COL27A1-208ENST00000494780 PDE5AO76074 875 aa20.22■□□□□ 0.83
COL27A1-208ENST00000494780 NR4A2P43354 598 aa20.22■□□□□ 0.83
COL27A1-208ENST00000494780 SH3BGRP55822 239 aaPredicted RBP20.22■□□□□ 0.83
COL27A1-208ENST00000494780 NAAAQ02083 359 aa20.22■□□□□ 0.83
COL27A1-208ENST00000494780 GGTLC2Q14390 218 aa20.22■□□□□ 0.83
COL27A1-208ENST00000494780 GTDC1Q4AE62 458 aa20.22■□□□□ 0.83
COL27A1-208ENST00000494780 ATG16L1Q676U5 607 aa20.22■□□□□ 0.83
COL27A1-208ENST00000494780 ANKRD16Q6P6B7 361 aa20.22■□□□□ 0.83
COL27A1-208ENST00000494780 LINGO2Q7L985 606 aa20.22■□□□□ 0.83
COL27A1-208ENST00000494780 FAM169BQ8N8A8 192 aa20.22■□□□□ 0.83
COL27A1-208ENST00000494780 SLC35B4Q969S0 331 aa20.22■□□□□ 0.83
COL27A1-208ENST00000494780 SDR39U1Q9NRG7 319 aaPredicted RBP20.22■□□□□ 0.83
COL27A1-208ENST00000494780 LOC390937A0A1W2PQ73 354 aa20.21■□□□□ 0.83
COL27A1-208ENST00000494780 TMEM120BA0PK00 339 aa20.21■□□□□ 0.83
COL27A1-208ENST00000494780 FTCDNL1E5RQL4 147 aa20.21■□□□□ 0.83
COL27A1-208ENST00000494780 PNMTP11086 282 aa20.21■□□□□ 0.83
COL27A1-208ENST00000494780 THBS2P35442 1172 aa20.21■□□□□ 0.83
COL27A1-208ENST00000494780 EFNB3Q15768 340 aa20.21■□□□□ 0.83
COL27A1-208ENST00000494780 ZNF311Q5JNZ3 666 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms