RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 ZNF682O95780 498 aa14.11□□□□□ -0.15
LIME1-209ENST00000494776 NQO1P15559 274 aaKnown RBP14.11□□□□□ -0.15
LIME1-209ENST00000494776 PSMB1P20618 241 aaKnown RBP14.11□□□□□ -0.15
LIME1-209ENST00000494776 SELENOWP63302 87 aa14.11□□□□□ -0.15
LIME1-209ENST00000494776 ITGADQ13349 1161 aa14.11□□□□□ -0.15
LIME1-209ENST00000494776 MFSD13AQ14CX5 517 aa14.11□□□□□ -0.15
LIME1-209ENST00000494776 POU4F3Q15319 338 aa14.11□□□□□ -0.15
LIME1-209ENST00000494776 TSC22D1Q15714 1073 aa14.11□□□□□ -0.15
LIME1-209ENST00000494776 SFRP5Q5T4F7 317 aa14.11□□□□□ -0.15
LIME1-209ENST00000494776 FBXW9Q5XUX1 488 aa14.11□□□□□ -0.15
LIME1-209ENST00000494776 TTC33Q6PID6 262 aaPredicted RBP14.11□□□□□ -0.15
LIME1-209ENST00000494776 TMEM43Q9BTV4 400 aa14.11□□□□□ -0.15
LIME1-209ENST00000494776 FAM53CQ9NYF3 392 aa14.11□□□□□ -0.15
LIME1-209ENST00000494776 ABCD2Q9UBJ2 740 aa14.11□□□□□ -0.15
LIME1-209ENST00000494776 M0R082 166 aa14.1□□□□□ -0.15
LIME1-209ENST00000494776 LYZL6O75951 148 aa14.1□□□□□ -0.15
LIME1-209ENST00000494776 CNOT4O95628 575 aaKnown RBP14.1□□□□□ -0.15
LIME1-209ENST00000494776 ZNF43P17038 809 aa14.1□□□□□ -0.15
LIME1-209ENST00000494776 EDNRAP25101 427 aa14.1□□□□□ -0.15
LIME1-209ENST00000494776 GRPRP30550 384 aa14.1□□□□□ -0.15
LIME1-209ENST00000494776 IFNA8P32881 189 aa14.1□□□□□ -0.15
LIME1-209ENST00000494776 MNAT1P51948 309 aa14.1□□□□□ -0.15
LIME1-209ENST00000494776 FOXD4Q12950 439 aaPredicted RBP14.1□□□□□ -0.15
LIME1-209ENST00000494776 C1DQ13901 141 aaKnown RBP14.1□□□□□ -0.15
LIME1-209ENST00000494776 FKBP9P1Q75LS8 142 aa14.1□□□□□ -0.15
LIME1-209ENST00000494776 H1FNTQ75WM6 255 aaPredicted RBP14.1□□□□□ -0.15
LIME1-209ENST00000494776 BHLHA15Q7RTS1 189 aaPredicted RBP14.1□□□□□ -0.15
LIME1-209ENST00000494776 AAED1Q7RTV5 226 aa14.1□□□□□ -0.15
LIME1-209ENST00000494776 WFDC8Q8IUA0 241 aa14.1□□□□□ -0.15
LIME1-209ENST00000494776 ZNF417Q8TAU3 575 aa14.1□□□□□ -0.15
LIME1-209ENST00000494776 S100PBPQ96BU1 408 aa14.1□□□□□ -0.15
LIME1-209ENST00000494776 SLC41A3Q96GZ6 507 aa14.1□□□□□ -0.15
LIME1-209ENST00000494776 MPP4Q96JB8 637 aa14.1□□□□□ -0.15
LIME1-209ENST00000494776 ZNF587Q96SQ5 575 aaPredicted RBP14.1□□□□□ -0.15
LIME1-209ENST00000494776 ASPNQ9BXN1 380 aa14.1□□□□□ -0.15
LIME1-209ENST00000494776 PCDHAC1Q9H158 963 aa14.1□□□□□ -0.15
LIME1-209ENST00000494776 OR10A4Q9H209 315 aa14.1□□□□□ -0.15
LIME1-209ENST00000494776 ASB6Q9NWX5 421 aa14.1□□□□□ -0.15
LIME1-209ENST00000494776 NDE1Q9NXR1 346 aa14.1□□□□□ -0.15
LIME1-209ENST00000494776 B3GALT5Q9Y2C3 310 aa14.1□□□□□ -0.15
LIME1-209ENST00000494776 ABCA12Q86UK0 2595 aa14.09□□□□□ -0.15
LIME1-209ENST00000494776 CIB4A0PJX0 185 aa14.09□□□□□ -0.15
LIME1-209ENST00000494776 FAM221AA4D161 298 aa14.09□□□□□ -0.15
LIME1-209ENST00000494776 KRT33AO76009 404 aa14.09□□□□□ -0.15
LIME1-209ENST00000494776 SERPINA1P01009 418 aa14.09□□□□□ -0.15
LIME1-209ENST00000494776 NCK1P16333 377 aa14.09□□□□□ -0.15
LIME1-209ENST00000494776 CRYGSP22914 178 aa14.09□□□□□ -0.15
LIME1-209ENST00000494776 NTF4P34130 210 aa14.09□□□□□ -0.15
LIME1-209ENST00000494776 P2RY4P51582 365 aa14.09□□□□□ -0.15
LIME1-209ENST00000494776 FAPQ12884 760 aa14.09□□□□□ -0.15
LIME1-209ENST00000494776 STK11Q15831 433 aa14.09□□□□□ -0.15
LIME1-209ENST00000494776 C16orf89Q6UX73 402 aa14.09□□□□□ -0.15
LIME1-209ENST00000494776 LINC00114Q6XXX2 140 aa14.09□□□□□ -0.15
LIME1-209ENST00000494776 CREB3L2Q70SY1 520 aa14.09□□□□□ -0.15
LIME1-209ENST00000494776 CDC20BQ86Y33 519 aa14.09□□□□□ -0.15
LIME1-209ENST00000494776 PGAM4Q8N0Y7 254 aa14.09□□□□□ -0.15
LIME1-209ENST00000494776 KDM8Q8N371 416 aa14.09□□□□□ -0.15
LIME1-209ENST00000494776 RNF148Q8N7C7 305 aa14.09□□□□□ -0.15
LIME1-209ENST00000494776 OR6S1Q8NH40 331 aa14.09□□□□□ -0.15
LIME1-209ENST00000494776 TMEM45BQ96B21 275 aa14.09□□□□□ -0.15
LIME1-209ENST00000494776 PIK3IP1Q96FE7 263 aa14.09□□□□□ -0.15
LIME1-209ENST00000494776 OXGR1Q96P68 337 aa14.09□□□□□ -0.15
LIME1-209ENST00000494776 ZNF385AQ96PM9 386 aaKnown RBP14.09□□□□□ -0.15
LIME1-209ENST00000494776 USB1Q9BQ65 265 aaKnown RBP14.09□□□□□ -0.15
LIME1-209ENST00000494776 POLR2J2Q9GZM3 115 aaKnown RBP14.09□□□□□ -0.15
LIME1-209ENST00000494776 POLR2J3Q9H1A7 115 aaKnown RBP14.09□□□□□ -0.15
LIME1-209ENST00000494776 SEC14L4Q9UDX3 406 aa14.09□□□□□ -0.15
LIME1-209ENST00000494776 EGFL7Q9UHF1 273 aa14.09□□□□□ -0.15
LIME1-209ENST00000494776 CORINQ9Y5Q5 1042 aa14.09□□□□□ -0.15
LIME1-209ENST00000494776 KPNA4O00629 521 aaPredicted RBP14.08□□□□□ -0.16
LIME1-209ENST00000494776 OR5F1O95221 314 aa14.08□□□□□ -0.16
LIME1-209ENST00000494776 BGLAPP02818 100 aa14.08□□□□□ -0.16
LIME1-209ENST00000494776 THY1P04216 161 aa14.08□□□□□ -0.16
LIME1-209ENST00000494776 IFNW1P05000 195 aa14.08□□□□□ -0.16
LIME1-209ENST00000494776 GGT1P19440 569 aa14.08□□□□□ -0.16
LIME1-209ENST00000494776 TCN1P20061 433 aaPredicted RBP14.08□□□□□ -0.16
LIME1-209ENST00000494776 IGHV1-2P23083 117 aa14.08□□□□□ -0.16
LIME1-209ENST00000494776 DNAJA1P31689 397 aaKnown RBP14.08□□□□□ -0.16
LIME1-209ENST00000494776 SLC25A3Q00325 362 aa14.08□□□□□ -0.16
LIME1-209ENST00000494776 PMS2P3Q13401 168 aa14.08□□□□□ -0.16
LIME1-209ENST00000494776 PIN1Q13526 163 aaPredicted RBP14.08□□□□□ -0.16
LIME1-209ENST00000494776 KRT72Q14CN4 511 aa14.08□□□□□ -0.16
LIME1-209ENST00000494776 GLYATQ6IB77 296 aa14.08□□□□□ -0.16
LIME1-209ENST00000494776 WDR88Q6ZMY6 472 aa14.08□□□□□ -0.16
LIME1-209ENST00000494776 C22orf34Q6ZV56 151 aa14.08□□□□□ -0.16
LIME1-209ENST00000494776 CBLL1Q75N03 491 aa14.08□□□□□ -0.16
LIME1-209ENST00000494776 VTCN1Q7Z7D3 282 aa14.08□□□□□ -0.16
LIME1-209ENST00000494776 CDH24Q86UP0 819 aa14.08□□□□□ -0.16
LIME1-209ENST00000494776 FITM2Q8N6M3 262 aa14.08□□□□□ -0.16
LIME1-209ENST00000494776 ZIC4Q8N9L1 334 aa14.08□□□□□ -0.16
LIME1-209ENST00000494776 HSD17B8Q92506 261 aa14.08□□□□□ -0.16
LIME1-209ENST00000494776 NSL1Q96IY1 281 aa14.08□□□□□ -0.16
LIME1-209ENST00000494776 RIMS3Q9UJD0 308 aa14.08□□□□□ -0.16
LIME1-209ENST00000494776 RPS6KA6Q9UK32 745 aa14.08□□□□□ -0.16
LIME1-209ENST00000494776 EDARQ9UNE0 448 aa14.08□□□□□ -0.16
LIME1-209ENST00000494776 OR6A2O95222 327 aa14.07□□□□□ -0.16
LIME1-209ENST00000494776 LYPD3O95274 346 aa14.07□□□□□ -0.16
LIME1-209ENST00000494776 MT-ATP6P00846 226 aa14.07□□□□□ -0.16
LIME1-209ENST00000494776 HRGP04196 525 aa14.07□□□□□ -0.16
LIME1-209ENST00000494776 HIST1H2ABP04908 130 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms