RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 SMG6Q86US8 1419 aaKnown RBP3.12□□□□□ -1.91
SMC4-224ENST00000494612 IGHV1OR15-1A0A075B7D0 117 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 E7ESA3 106 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 NPIPA7E9PJI5 369 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 BTN3A3O00478 584 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 MAGEB3O15480 346 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 RGS16O15492 202 aaPredicted RBP3.12□□□□□ -1.91
SMC4-224ENST00000494612 ACTL6AO96019 429 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 OPN1MWP04001 364 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 SEMG1P04279 462 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 H2BFMP0C1H6 154 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 NPIPA8P0DM63 369 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 OPN1MW2P0DN77 364 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 OPN1MW3P0DN78 364 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 RNH1P13489 461 aaKnown RBP3.12□□□□□ -1.91
SMC4-224ENST00000494612 NCK1P16333 377 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 MMP11P24347 488 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 ANXA13P27216 316 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 GCAP28676 217 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 LAP3P28838 519 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 PRPHP41219 470 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 PPT1P50897 306 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 CAV2P51636 162 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 ZNF45Q02386 682 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 CCDC173Q0VFZ6 552 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 CFAP221Q4G0U5 840 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 RSBN1Q5VWQ0 802 aaPredicted RBP3.12□□□□□ -1.91
SMC4-224ENST00000494612 PMF1Q6P1K2 205 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 SCARA5Q6ZMJ2 495 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 ACOT7LQ6ZUV0 252 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 ARCQ7LC44 396 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 VASH2Q86V25 355 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 CCDC65Q8IXS2 484 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 DHRSXQ8N5I4 330 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 SYT14Q8NB59 555 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 ZNF740Q8NDX6 193 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 OR10A7Q8NGE5 316 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 OR52I1Q8NGK6 324 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 TCTEX1D2Q8WW35 142 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 MAIP1Q8WWC4 291 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 C7orf34Q96L11 122 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 TGM7Q96PF1 710 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 TXN2Q99757 166 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 KLHDC3Q9BQ90 382 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 SRXN1Q9BYN0 137 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 ZNF385DQ9H6B1 395 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 POPDC2Q9HBU9 364 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 MARCH5Q9NX47 278 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 HOXC10Q9NYD6 342 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 PCSK1NQ9UHG2 260 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 NPIPA1Q9UND3 350 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 RPH3ALQ9UNE2 315 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 ERVW-1Q9UQF0 538 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 C4AP0C0L4 1744 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 TIAM2Q8IVF5 1701 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 ZNF646O15015 1829 aaPredicted RBP3.12□□□□□ -1.91
SMC4-224ENST00000494612 RAB3GAP2Q9H2M9 1393 aa3.12□□□□□ -1.91
SMC4-224ENST00000494612 A0A0G2JRQ6 117 aa3.11□□□□□ -1.91
SMC4-224ENST00000494612 GPR89AB7ZAQ6 455 aa3.11□□□□□ -1.91
SMC4-224ENST00000494612 ARPC3O15145 178 aa3.11□□□□□ -1.91
SMC4-224ENST00000494612 OR10H3O60404 316 aa3.11□□□□□ -1.91
SMC4-224ENST00000494612 GPR89BP0CG08 455 aa3.11□□□□□ -1.91
SMC4-224ENST00000494612 PNMTP11086 282 aa3.11□□□□□ -1.91
SMC4-224ENST00000494612 CCDC130P13994 396 aa3.11□□□□□ -1.91
SMC4-224ENST00000494612 FUT3P21217 361 aa3.11□□□□□ -1.91
SMC4-224ENST00000494612 RFC4P35249 363 aa3.11□□□□□ -1.91
SMC4-224ENST00000494612 HNMTP50135 292 aa3.11□□□□□ -1.91
SMC4-224ENST00000494612 HLCSP50747 726 aa3.11□□□□□ -1.91
SMC4-224ENST00000494612 DAP3P51398 398 aaKnown RBP3.11□□□□□ -1.91
SMC4-224ENST00000494612 ARFIP1P53367 373 aa3.11□□□□□ -1.91
SMC4-224ENST00000494612 CSNK1G2P78368 415 aa3.11□□□□□ -1.91
SMC4-224ENST00000494612 EGFEM1PQ0D2K5 195 aa3.11□□□□□ -1.91
SMC4-224ENST00000494612 DMRTC1Q5HYR2 192 aa3.11□□□□□ -1.91
SMC4-224ENST00000494612 METTL11BQ5VVY1 283 aa3.11□□□□□ -1.91
SMC4-224ENST00000494612 TMEM225Q6GV28 225 aa3.11□□□□□ -1.91
SMC4-224ENST00000494612 VSTM4Q8IW00 320 aa3.11□□□□□ -1.91
SMC4-224ENST00000494612 SLC35F2Q8IXU6 374 aa3.11□□□□□ -1.91
SMC4-224ENST00000494612 ZNF683Q8IZ20 524 aa3.11□□□□□ -1.91
SMC4-224ENST00000494612 BBS1Q8NFJ9 593 aa3.11□□□□□ -1.91
SMC4-224ENST00000494612 MAGT1Q9H0U3 335 aa3.11□□□□□ -1.91
SMC4-224ENST00000494612 OR51J1Q9H342 316 aa3.11□□□□□ -1.91
SMC4-224ENST00000494612 POLE4Q9NR33 117 aa3.11□□□□□ -1.91
SMC4-224ENST00000494612 ABCB10Q9NRK6 738 aa3.11□□□□□ -1.91
SMC4-224ENST00000494612 SMPD3Q9NY59 655 aaPredicted RBP3.11□□□□□ -1.91
SMC4-224ENST00000494612 TREM2Q9NZC2 230 aa3.11□□□□□ -1.91
SMC4-224ENST00000494612 PHF11Q9UIL8 331 aa3.11□□□□□ -1.91
SMC4-224ENST00000494612 MAP3K19Q56UN5 1328 aa3.11□□□□□ -1.91
SMC4-224ENST00000494612 SBF1O95248 1867 aa3.11□□□□□ -1.91
SMC4-224ENST00000494612 CNTNAP1P78357 1384 aa3.11□□□□□ -1.91
SMC4-224ENST00000494612 ZNF318Q5VUA4 2279 aa3.1□□□□□ -1.91
SMC4-224ENST00000494612 EDC4Q6P2E9 1401 aaKnown RBP3.1□□□□□ -1.91
SMC4-224ENST00000494612 LRRK1Q38SD2 2015 aa3.1□□□□□ -1.91
SMC4-224ENST00000494612 IGHV7-81A0A0B4J1V7 117 aa3.1□□□□□ -1.91
SMC4-224ENST00000494612 A0A0J9YXY3 114 aa3.1□□□□□ -1.91
SMC4-224ENST00000494612 MBLAC1A4D2B0 266 aaPredicted RBP3.1□□□□□ -1.91
SMC4-224ENST00000494612 TMEM110-MUSTN1A8MSY1 372 aa3.1□□□□□ -1.91
SMC4-224ENST00000494612 EMC8O43402 210 aa3.1□□□□□ -1.91
SMC4-224ENST00000494612 GCFC2P16383 781 aaKnown RBP3.1□□□□□ -1.91
SMC4-224ENST00000494612 OTX2P32243 289 aa3.1□□□□□ -1.91
SMC4-224ENST00000494612 RPS14P62263 151 aaKnown RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms