RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 CNIH4Q9P003 139 aa5.94□□□□□ -1.46
TRA2B-216ENST00000493864 LRFN1Q9P244 771 aa5.94□□□□□ -1.46
TRA2B-216ENST00000493864 ABI3Q9P2A4 366 aa5.94□□□□□ -1.46
TRA2B-216ENST00000493864 RHCGQ9UBD6 479 aa5.94□□□□□ -1.46
TRA2B-216ENST00000493864 SLC35A3Q9Y2D2 325 aa5.94□□□□□ -1.46
TRA2B-216ENST00000493864 SLC9A8Q9Y2E8 581 aa5.94□□□□□ -1.46
TRA2B-216ENST00000493864 PCDHGB6Q9Y5F9 930 aa5.94□□□□□ -1.46
TRA2B-216ENST00000493864 NOX1Q9Y5S8 564 aa5.94□□□□□ -1.46
TRA2B-216ENST00000493864 RP1L1Q8IWN7 2480 aaPredicted RBP5.94□□□□□ -1.46
TRA2B-216ENST00000493864 TNRC6AQ8NDV7 1962 aaKnown RBP5.94□□□□□ -1.46
TRA2B-216ENST00000493864 HELZ2Q9BYK8 2649 aaKnown RBP5.94□□□□□ -1.46
TRA2B-216ENST00000493864 MED12Q93074 2177 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 BAHCC1Q9P281 2608 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 A0A0G2JMM0 328 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 A0A1W2PPB8 328 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 A0A1W2PRS3 328 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 CPSF4LA6NMK7 179 aaKnown RBP5.93□□□□□ -1.46
TRA2B-216ENST00000493864 KIR3DP1A8MWS1 328 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 M0QYG6 137 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 HCRTR2O43614 444 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 NEURL1O76050 574 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 LYPD3O95274 346 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 NTN1O95631 604 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 CST1P01037 141 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 LDLRP01130 860 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 THY1P04216 161 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 P04436 131 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 LINGO3P0C6S8 592 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 CNR1P21554 472 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 FASP25445 335 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 HTR2AP28223 471 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 PEX2P28328 305 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 IST1P53990 364 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 CXADRP78310 365 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 RPP38P78345 283 aaKnown RBP5.93□□□□□ -1.46
TRA2B-216ENST00000493864 SLC34A1Q06495 639 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 PIGFQ07326 219 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 C17orf67Q0P5P2 114 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 EPS8Q12929 822 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 OR1Q1Q15612 314 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 OR1C1Q15619 314 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 TOMM34Q15785 309 aaPredicted RBP5.93□□□□□ -1.46
TRA2B-216ENST00000493864 ATP6AP1Q15904 470 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 BEAN1Q3B7T3 259 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 ENTPD8Q5MY95 495 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 OR2T5Q6IEZ7 315 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 SLC30A6Q6NXT4 461 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 ZNF550Q7Z398 422 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 TMEM179BQ7Z7N9 219 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 ZNF440Q8IYI8 595 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 DND1Q8IYX4 353 aaKnown RBP5.93□□□□□ -1.46
TRA2B-216ENST00000493864 TMCO5AQ8N6Q1 288 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 WDSUB1Q8N9V3 476 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 FAM71CQ8NEG0 241 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 OR2T29Q8NH02 315 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 GPR119Q8TDV5 335 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 PHF10Q8WUB8 498 aaKnown RBP5.93□□□□□ -1.46
TRA2B-216ENST00000493864 HAS2Q92819 552 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 BBC3Q96PG8 261 aaPredicted RBP5.93□□□□□ -1.46
TRA2B-216ENST00000493864 ZNF347Q96SE7 839 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 SECISBP2Q96T21 854 aaKnown RBP5.93□□□□□ -1.46
TRA2B-216ENST00000493864 PIP5K1AQ99755 562 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 ZNF559Q9BR84 538 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 OSBPL11Q9BXB4 747 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 HES7Q9BYE0 225 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 SEMA6AQ9H2E6 1030 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 YY1AP1Q9H869 796 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 NMNAT1Q9HAN9 279 aaPredicted RBP5.93□□□□□ -1.46
TRA2B-216ENST00000493864 KLHL1Q9NR64 748 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 SDHAF3Q9NRP4 125 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 AGPAT4Q9NRZ5 378 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 SACM1LQ9NTJ5 587 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 DEPPQ9NTK1 212 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 ACER3Q9NUN7 267 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 MRPS18AQ9NVS2 196 aaKnown RBP5.93□□□□□ -1.46
TRA2B-216ENST00000493864 VSX1Q9NZR4 365 aaPredicted RBP5.93□□□□□ -1.46
TRA2B-216ENST00000493864 KLRF1Q9NZS2 232 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 MED11Q9P086 117 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 STX18Q9P2W9 335 aaKnown RBP5.93□□□□□ -1.46
TRA2B-216ENST00000493864 DNAJB9Q9UBS3 223 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 RIMS3Q9UJD0 308 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 ICAM5Q9UMF0 924 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 A4GNTQ9UNA3 340 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 FAM32AQ9Y421 112 aaKnown RBP5.93□□□□□ -1.46
TRA2B-216ENST00000493864 ZNF462Q96JM2 2506 aa5.93□□□□□ -1.46
TRA2B-216ENST00000493864 CPAMD8Q8IZJ3 1885 aa5.92□□□□□ -1.46
TRA2B-216ENST00000493864 TENM4Q6N022 2769 aa5.92□□□□□ -1.46
TRA2B-216ENST00000493864 FREM3P0C091 2139 aa5.92□□□□□ -1.46
TRA2B-216ENST00000493864 IGLV3-32A0A0A0MS00 114 aa5.92□□□□□ -1.46
TRA2B-216ENST00000493864 A0A1B0GWA3 101 aa5.92□□□□□ -1.46
TRA2B-216ENST00000493864 PINLYPA6NC86 204 aa5.92□□□□□ -1.46
TRA2B-216ENST00000493864 OR5H15A6NDH6 313 aa5.92□□□□□ -1.46
TRA2B-216ENST00000493864 UNC119BA6NIH7 251 aa5.92□□□□□ -1.46
TRA2B-216ENST00000493864 SAC3D1A6NKF1 404 aa5.92□□□□□ -1.46
TRA2B-216ENST00000493864 K7EM74 188 aa5.92□□□□□ -1.46
TRA2B-216ENST00000493864 GNGT2O14610 69 aa5.92□□□□□ -1.46
TRA2B-216ENST00000493864 CDC40O60508 579 aaKnown RBP eCLIP5.92□□□□□ -1.46
TRA2B-216ENST00000493864 FMO6PO60774 539 aa5.92□□□□□ -1.46
TRA2B-216ENST00000493864 TRIM3O75382 744 aaPredicted RBP5.92□□□□□ -1.46
TRA2B-216ENST00000493864 SP1P08047 785 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms