RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 SAXO2Q658L1 398 aa15.27■□□□□ 0.04
NUP50-218ENST00000493456 SHQ1Q6PI26 577 aaKnown RBP15.27■□□□□ 0.04
NUP50-218ENST00000493456 CREB3L2Q70SY1 520 aa15.27■□□□□ 0.04
NUP50-218ENST00000493456 TUBA1AQ71U36 451 aa15.27■□□□□ 0.04
NUP50-218ENST00000493456 HMGN2P46Q86SG4 172 aa15.27■□□□□ 0.04
NUP50-218ENST00000493456 CDK20Q8IZL9 346 aa15.27■□□□□ 0.04
NUP50-218ENST00000493456 TEX29Q8N6K0 151 aa15.27■□□□□ 0.04
NUP50-218ENST00000493456 ANKK1Q8NFD2 765 aa15.27■□□□□ 0.04
NUP50-218ENST00000493456 IL17RDQ8NFM7 739 aa15.27■□□□□ 0.04
NUP50-218ENST00000493456 TMEM186Q96B77 213 aa15.27■□□□□ 0.04
NUP50-218ENST00000493456 NEURL3Q96EH8 262 aa15.27■□□□□ 0.04
NUP50-218ENST00000493456 TAPBPLQ9BX59 468 aa15.27■□□□□ 0.04
NUP50-218ENST00000493456 NELFAQ9H3P2 528 aa15.27■□□□□ 0.04
NUP50-218ENST00000493456 HIF1ANQ9NWT6 349 aa15.27■□□□□ 0.04
NUP50-218ENST00000493456 MKS1Q9NXB0 559 aa15.27■□□□□ 0.04
NUP50-218ENST00000493456 IGHV2OR16-5A0A0B4J2B6 119 aa15.26■□□□□ 0.03
NUP50-218ENST00000493456 SH3PXD2BA1X283 911 aa15.26■□□□□ 0.03
NUP50-218ENST00000493456 AGAP5A6NIR3 686 aa15.26■□□□□ 0.03
NUP50-218ENST00000493456 TRIM77I1YAP6 450 aa15.26■□□□□ 0.03
NUP50-218ENST00000493456 SCN2BO60939 215 aa15.26■□□□□ 0.03
NUP50-218ENST00000493456 TFP02787 698 aa15.26■□□□□ 0.03
NUP50-218ENST00000493456 IGFBP1P08833 259 aaPredicted RBP15.26■□□□□ 0.03
NUP50-218ENST00000493456 CBR1P16152 277 aa15.26■□□□□ 0.03
NUP50-218ENST00000493456 P2RY4P51582 365 aa15.26■□□□□ 0.03
NUP50-218ENST00000493456 HILS1P60008 231 aa15.26■□□□□ 0.03
NUP50-218ENST00000493456 EMX2Q04743 252 aa15.26■□□□□ 0.03
NUP50-218ENST00000493456 EPS8Q12929 822 aa15.26■□□□□ 0.03
NUP50-218ENST00000493456 SMU1Q2TAY7 513 aa15.26■□□□□ 0.03
NUP50-218ENST00000493456 ANXA8L1Q5VT79 327 aa15.26■□□□□ 0.03
NUP50-218ENST00000493456 NIPAL3Q6P499 406 aa15.26■□□□□ 0.03
NUP50-218ENST00000493456 LINGO2Q7L985 606 aa15.26■□□□□ 0.03
NUP50-218ENST00000493456 VPS37AQ8NEZ2 397 aa15.26■□□□□ 0.03
NUP50-218ENST00000493456 C16orf45Q96MC5 204 aaPredicted RBP15.26■□□□□ 0.03
NUP50-218ENST00000493456 TRNT1Q96Q11 434 aaKnown RBP15.26■□□□□ 0.03
NUP50-218ENST00000493456 JMJD8Q96S16 334 aa15.26■□□□□ 0.03
NUP50-218ENST00000493456 RBM4Q9BWF3 364 aaKnown RBP15.26■□□□□ 0.03
NUP50-218ENST00000493456 ADPRHL2Q9NX46 363 aa15.26■□□□□ 0.03
NUP50-218ENST00000493456 MARCOQ9UEW3 520 aaPredicted RBP15.26■□□□□ 0.03
NUP50-218ENST00000493456 PCDHB10Q9UN67 800 aa15.26■□□□□ 0.03
NUP50-218ENST00000493456 PRSS51A0A1B0GVH4 220 aa15.25■□□□□ 0.03
NUP50-218ENST00000493456 PRAMEF27A3QJZ7 478 aa15.25■□□□□ 0.03
NUP50-218ENST00000493456 UPK3AO75631 287 aa15.25■□□□□ 0.03
NUP50-218ENST00000493456 SHBGP04278 402 aa15.25■□□□□ 0.03
NUP50-218ENST00000493456 MSMBP08118 114 aa15.25■□□□□ 0.03
NUP50-218ENST00000493456 CELA3BP08861 270 aa15.25■□□□□ 0.03
NUP50-218ENST00000493456 ADRA2AP08913 450 aa15.25■□□□□ 0.03
NUP50-218ENST00000493456 ARR3P36575 388 aa15.25■□□□□ 0.03
NUP50-218ENST00000493456 LIMS1P48059 325 aa15.25■□□□□ 0.03
NUP50-218ENST00000493456 EVX1P49640 407 aa15.25■□□□□ 0.03
NUP50-218ENST00000493456 TXNL4AP83876 142 aaKnown RBP15.25■□□□□ 0.03
NUP50-218ENST00000493456 ROR2Q01974 943 aaKnown RBP15.25■□□□□ 0.03
NUP50-218ENST00000493456 DAG1Q14118 895 aa15.25■□□□□ 0.03
NUP50-218ENST00000493456 SLC9B1Q4ZJI4 515 aa15.25■□□□□ 0.03
NUP50-218ENST00000493456 PRAMEF8Q5VWM4 474 aa15.25■□□□□ 0.03
NUP50-218ENST00000493456 PRAMEF7Q5VXH5 474 aa15.25■□□□□ 0.03
NUP50-218ENST00000493456 MYPOPQ86VE0 399 aaPredicted RBP15.25■□□□□ 0.03
NUP50-218ENST00000493456 ZNF440Q8IYI8 595 aa15.25■□□□□ 0.03
NUP50-218ENST00000493456 APOPT1Q96IL0 206 aa15.25■□□□□ 0.03
NUP50-218ENST00000493456 SLC38A1Q9H2H9 487 aa15.25■□□□□ 0.03
NUP50-218ENST00000493456 TPK1Q9H3S4 243 aa15.25■□□□□ 0.03
NUP50-218ENST00000493456 RASD1Q9Y272 281 aa15.25■□□□□ 0.03
NUP50-218ENST00000493456 CMAHPQ9Y471 501 aa15.25■□□□□ 0.03
NUP50-218ENST00000493456 TGP01266 2768 aa15.24■□□□□ 0.03
NUP50-218ENST00000493456 SMIM23A6NLE4 172 aa15.24■□□□□ 0.03
NUP50-218ENST00000493456 A8MVM7 634 aa15.24■□□□□ 0.03
NUP50-218ENST00000493456 LYNX1G3V0Z9 82 aa15.24■□□□□ 0.03
NUP50-218ENST00000493456 RPL36A-HNRNPH2H7BZ11 118 aa15.24■□□□□ 0.03
NUP50-218ENST00000493456 HMGN4O00479 90 aa15.24■□□□□ 0.03
NUP50-218ENST00000493456 FRS3O43559 492 aa15.24■□□□□ 0.03
NUP50-218ENST00000493456 SYNGR3O43761 229 aa15.24■□□□□ 0.03
NUP50-218ENST00000493456 LYNX1P0DP58 116 aa15.24■□□□□ 0.03
NUP50-218ENST00000493456 SAGP10523 405 aaPredicted RBP15.24■□□□□ 0.03
NUP50-218ENST00000493456 IL7RP16871 459 aa15.24■□□□□ 0.03
NUP50-218ENST00000493456 RPS4Y1P22090 263 aaKnown RBP15.24■□□□□ 0.03
NUP50-218ENST00000493456 CHI3L1P36222 383 aaPredicted RBP15.24■□□□□ 0.03
NUP50-218ENST00000493456 GPR6P46095 362 aaPredicted RBP15.24■□□□□ 0.03
NUP50-218ENST00000493456 ARFIP2P53365 341 aa15.24■□□□□ 0.03
NUP50-218ENST00000493456 SNTB2Q13425 540 aaKnown RBP15.24■□□□□ 0.03
NUP50-218ENST00000493456 MRPL2Q5T653 305 aaKnown RBP15.24■□□□□ 0.03
NUP50-218ENST00000493456 LRRC74BQ6ZQY2 392 aa15.24■□□□□ 0.03
NUP50-218ENST00000493456 ZCCHC23Q6ZST2 131 aa15.24■□□□□ 0.03
NUP50-218ENST00000493456 PEG10Q86TG7 708 aaKnown RBP15.24■□□□□ 0.03
NUP50-218ENST00000493456 ANKRD46Q86W74 232 aa15.24■□□□□ 0.03
NUP50-218ENST00000493456 EPHX4Q8IUS5 362 aa15.24■□□□□ 0.03
NUP50-218ENST00000493456 CCDC36Q8IYA8 594 aa15.24■□□□□ 0.03
NUP50-218ENST00000493456 OR51F2Q8NH61 342 aa15.24■□□□□ 0.03
NUP50-218ENST00000493456 CLDND2Q8NHS1 167 aa15.24■□□□□ 0.03
NUP50-218ENST00000493456 ZIM3Q96PE6 472 aa15.24■□□□□ 0.03
NUP50-218ENST00000493456 LRRC37BQ96QE4 947 aa15.24■□□□□ 0.03
NUP50-218ENST00000493456 SLC35A5Q9BS91 424 aa15.24■□□□□ 0.03
NUP50-218ENST00000493456 MECRQ9BV79 373 aa15.24■□□□□ 0.03
NUP50-218ENST00000493456 NOX3Q9HBY0 568 aa15.24■□□□□ 0.03
NUP50-218ENST00000493456 ZDHHC2Q9UIJ5 367 aa15.24■□□□□ 0.03
NUP50-218ENST00000493456 USP22Q9UPT9 525 aa15.24■□□□□ 0.03
NUP50-218ENST00000493456 RCE1Q9Y256 329 aa15.24■□□□□ 0.03
NUP50-218ENST00000493456 M0R233 179 aa15.23■□□□□ 0.03
NUP50-218ENST00000493456 CPSF4O95639 269 aaKnown RBP15.23■□□□□ 0.03
NUP50-218ENST00000493456 DBIP07108 87 aaKnown RBP15.23■□□□□ 0.03
NUP50-218ENST00000493456 CHRM4P08173 479 aa15.23■□□□□ 0.03
NUP50-218ENST00000493456 ACHEP22303 614 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms