RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 FAM166BA8MTA8 275 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 C21orf140B9A014 251 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 GOLGA8RI6L899 631 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 ARID1AO14497 2285 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 AP3D1O14617 1153 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 TO15178 435 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 TOX3O15405 576 aaPredicted RBP2.55□□□□□ -2
PTCD3-218ENST00000493430 LRRTM2O43300 516 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 BCL2L11O43521 198 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 CHST10O43529 356 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 HS6ST1O60243 411 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 DIAPH2O60879 1101 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 VPS26AO75436 327 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 GAS8O95995 478 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 CATP04040 527 aaKnown RBP2.55□□□□□ -2
PTCD3-218ENST00000493430 KLK3P07288 261 aaPredicted RBP2.55□□□□□ -2
PTCD3-218ENST00000493430 UQCRHP07919 91 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 RAB40ALP0C0E4 278 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 PORP16435 677 aaPredicted RBP2.55□□□□□ -2
PTCD3-218ENST00000493430 PGAM1P18669 254 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 CDH2P19022 906 aaPredicted RBP2.55□□□□□ -2
PTCD3-218ENST00000493430 CMPK1P30085 196 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 MAGEA6P43360 314 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 CD151P48509 253 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 NPY2RP49146 381 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 EMP2P54851 167 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 CX3CL1P78423 397 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 CYCSP99999 105 aaKnown RBP2.55□□□□□ -2
PTCD3-218ENST00000493430 REEP5Q00765 189 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 DR1Q01658 176 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 PAX8Q06710 450 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 RPA4Q13156 261 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 SLMAPQ14BN4 828 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 TBCEQ15813 527 aaPredicted RBP2.55□□□□□ -2
PTCD3-218ENST00000493430 CLPPQ16740 277 aaPredicted RBP2.55□□□□□ -2
PTCD3-218ENST00000493430 PPP1R3AQ16821 1122 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 KBTBD12Q3ZCT8 623 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 SFT2D3Q587I9 215 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 DNAJC21Q5F1R6 531 aaKnown RBP2.55□□□□□ -2
PTCD3-218ENST00000493430 SPANXN3Q5MJ09 141 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 GRTP1Q5TC63 336 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 GKAP1Q5VSY0 366 aaPredicted RBP2.55□□□□□ -2
PTCD3-218ENST00000493430 KLHL35Q6PF15 583 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 SCIMPQ6UWF3 145 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 CFAP77Q6ZQR2 320 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 Q6ZS92 163 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 ANKRD37Q7Z713 158 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 PXKQ7Z7A4 578 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 ASPGQ86U10 573 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 THOC6Q86W42 341 aaKnown RBP2.55□□□□□ -2
PTCD3-218ENST00000493430 RAB43Q86YS6 212 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 PRR22Q8IZ63 422 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 KIRREL3Q8IZU9 778 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 CA13Q8N1Q1 262 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 RNF10Q8N5U6 811 aaKnown RBP2.55□□□□□ -2
PTCD3-218ENST00000493430 SNX31Q8N9S9 440 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 TTC29Q8NA56 475 aaPredicted RBP2.55□□□□□ -2
PTCD3-218ENST00000493430 CCDC168Q8NDH2 2452 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 OR10G8Q8NGN5 311 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 OR51Q1Q8NH59 317 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 FBXO25Q8TCJ0 367 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 SMPDL3AQ92484 453 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 CREBBPQ92793 2442 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 RAD51AP1Q96B01 352 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 NXNL1Q96CM4 212 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 ZNF285Q96NJ3 590 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 GAL3ST4Q96RP7 486 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 KCNA7Q96RP8 456 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 EBNA1BP2Q99848 306 aaKnown RBP2.55□□□□□ -2
PTCD3-218ENST00000493430 KLHDC3Q9BQ90 382 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 C17orf62Q9BQA9 187 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 ANP32EQ9BTT0 268 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 ITPAQ9BY32 194 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 TXLNGYQ9BZA5 131 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 TSGA10Q9BZW7 698 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 ADNPQ9H2P0 1102 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 MUC13Q9H3R2 512 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 PLK3Q9H4B4 646 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 ALG9Q9H6U8 611 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 VPS37BQ9H9H4 285 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 MRM3Q9HC36 420 aaKnown RBP2.55□□□□□ -2
PTCD3-218ENST00000493430 DEPPQ9NTK1 212 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 OR6C2Q9NZP2 312 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 ANAPC2Q9UJX6 822 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 TMEM5Q9Y2B1 443 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 DHRS7Q9Y394 339 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 MAGED1Q9Y5V3 778 aaPredicted RBP2.55□□□□□ -2
PTCD3-218ENST00000493430 KLF2Q9Y5W3 355 aaPredicted RBP2.55□□□□□ -2
PTCD3-218ENST00000493430 SNX8Q9Y5X2 465 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 HEBP2Q9Y5Z4 205 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 FAM169AQ9Y6X4 670 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 V9GYY5 206 aaPredicted RBP2.55□□□□□ -2
PTCD3-218ENST00000493430 APCP25054 2843 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 ITPR3Q14573 2671 aa2.55□□□□□ -2
PTCD3-218ENST00000493430 SPG11Q96JI7 2443 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 PLCE1Q9P212 2302 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 ALPK2Q86TB3 2170 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 CELSR2Q9HCU4 2923 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 NSG1A0A0A6YYJ2 146 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 TRGV8A0A0C4DH27 118 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms