RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 MEIOBQ8N635 442 aa12.04□□□□□ -0.48
MSH6-208ENST00000493177 GNPDA2Q8TDQ7 276 aa12.04□□□□□ -0.48
MSH6-208ENST00000493177 TAAR8Q969N4 342 aa12.04□□□□□ -0.48
MSH6-208ENST00000493177 GTPBP3Q969Y2 492 aaKnown RBP12.04□□□□□ -0.48
MSH6-208ENST00000493177 BPIFA2Q96DR5 249 aa12.04□□□□□ -0.48
MSH6-208ENST00000493177 ARL5BQ96KC2 179 aa12.04□□□□□ -0.48
MSH6-208ENST00000493177 POTEKPQ9BYX7 375 aa12.04□□□□□ -0.48
MSH6-208ENST00000493177 ZNF556Q9HAH1 456 aa12.04□□□□□ -0.48
MSH6-208ENST00000493177 MEPEQ9NQ76 525 aaPredicted RBP12.04□□□□□ -0.48
MSH6-208ENST00000493177 C20orf141Q9NUB4 165 aa12.04□□□□□ -0.48
MSH6-208ENST00000493177 MGAT4BQ9UQ53 548 aa12.04□□□□□ -0.48
MSH6-208ENST00000493177 CAMK2AQ9UQM7 478 aa12.04□□□□□ -0.48
MSH6-208ENST00000493177 USP9YO00507 2555 aaPredicted RBP12.03□□□□□ -0.48
MSH6-208ENST00000493177 PCNX1Q96RV3 2341 aa12.03□□□□□ -0.48
MSH6-208ENST00000493177 A0A0J9YW62 118 aa12.03□□□□□ -0.48
MSH6-208ENST00000493177 EFCAB9A8MZ26 197 aa12.03□□□□□ -0.48
MSH6-208ENST00000493177 LRRN3E7EW58 273 aa12.03□□□□□ -0.48
MSH6-208ENST00000493177 OR2T1O43869 369 aa12.03□□□□□ -0.48
MSH6-208ENST00000493177 NPIPB7O75200 414 aa12.03□□□□□ -0.48
MSH6-208ENST00000493177 GASTP01350 101 aa12.03□□□□□ -0.48
MSH6-208ENST00000493177 HOXD4P09016 255 aaPredicted RBP12.03□□□□□ -0.48
MSH6-208ENST00000493177 SAGP10523 405 aaPredicted RBP12.03□□□□□ -0.48
MSH6-208ENST00000493177 ANXA8P13928 327 aa12.03□□□□□ -0.48
MSH6-208ENST00000493177 PEX2P28328 305 aa12.03□□□□□ -0.48
MSH6-208ENST00000493177 PTGER4P35408 488 aa12.03□□□□□ -0.48
MSH6-208ENST00000493177 EIF1AXP47813 144 aaKnown RBP12.03□□□□□ -0.48
MSH6-208ENST00000493177 OMPP47874 163 aa12.03□□□□□ -0.48
MSH6-208ENST00000493177 LHX2P50458 406 aa12.03□□□□□ -0.48
MSH6-208ENST00000493177 CTBP2P56545 445 aa12.03□□□□□ -0.48
MSH6-208ENST00000493177 RPS3AP61247 264 aaKnown RBP12.03□□□□□ -0.48
MSH6-208ENST00000493177 MYBPHQ13203 477 aa12.03□□□□□ -0.48
MSH6-208ENST00000493177 CDSNQ15517 529 aa12.03□□□□□ -0.48
MSH6-208ENST00000493177 NHSL2Q5HYW2 709 aa12.03□□□□□ -0.48
MSH6-208ENST00000493177 HBMQ6B0K9 141 aa12.03□□□□□ -0.48
MSH6-208ENST00000493177 PPP4R4Q6NUP7 873 aa12.03□□□□□ -0.48
MSH6-208ENST00000493177 ZBTB49Q6ZSB9 765 aa12.03□□□□□ -0.48
MSH6-208ENST00000493177 ESPNLQ6ZVH7 1005 aa12.03□□□□□ -0.48
MSH6-208ENST00000493177 CHMP1BQ7LBR1 199 aa12.03□□□□□ -0.48
MSH6-208ENST00000493177 ZER1Q7Z7L7 766 aa12.03□□□□□ -0.48
MSH6-208ENST00000493177 EPHX4Q8IUS5 362 aa12.03□□□□□ -0.48
MSH6-208ENST00000493177 PM20D2Q8IYS1 436 aa12.03□□□□□ -0.48
MSH6-208ENST00000493177 OR2V1Q8NHB1 315 aa12.03□□□□□ -0.48
MSH6-208ENST00000493177 FEVQ99581 238 aa12.03□□□□□ -0.48
MSH6-208ENST00000493177 TTYH2Q9BSA4 534 aa12.03□□□□□ -0.48
MSH6-208ENST00000493177 GABARAPL1Q9H0R8 117 aa12.03□□□□□ -0.48
MSH6-208ENST00000493177 SMURF2Q9HAU4 748 aa12.03□□□□□ -0.48
MSH6-208ENST00000493177 KCNJ16Q9NPI9 418 aa12.03□□□□□ -0.48
MSH6-208ENST00000493177 HDGFL3Q9Y3E1 203 aa12.03□□□□□ -0.48
MSH6-208ENST00000493177 COL12A1Q99715 3063 aa12.03□□□□□ -0.48
MSH6-208ENST00000493177 HCFC1P51610 2035 aa12.03□□□□□ -0.48
MSH6-208ENST00000493177 SPTAN1Q13813 2472 aaKnown RBP12.02□□□□□ -0.48
MSH6-208ENST00000493177 NKX2-6A6NCS4 301 aa12.02□□□□□ -0.49
MSH6-208ENST00000493177 ARRDC5A6NEK1 342 aa12.02□□□□□ -0.49
MSH6-208ENST00000493177 H0YC42 278 aa12.02□□□□□ -0.49
MSH6-208ENST00000493177 C19orf84I3L1E1 186 aa12.02□□□□□ -0.49
MSH6-208ENST00000493177 SULT2B1O00204 365 aa12.02□□□□□ -0.49
MSH6-208ENST00000493177 OR7A10O76100 309 aa12.02□□□□□ -0.49
MSH6-208ENST00000493177 HIST1H2ABP04908 130 aa12.02□□□□□ -0.49
MSH6-208ENST00000493177 IMPDH2P12268 514 aa12.02□□□□□ -0.49
MSH6-208ENST00000493177 FUT1P19526 365 aa12.02□□□□□ -0.49
MSH6-208ENST00000493177 MAKP20794 623 aa12.02□□□□□ -0.49
MSH6-208ENST00000493177 SUCLG1P53597 346 aaKnown RBP12.02□□□□□ -0.49
MSH6-208ENST00000493177 TPD52P55327 224 aaPredicted RBP12.02□□□□□ -0.49
MSH6-208ENST00000493177 CSNK2A1P68400 391 aaPredicted RBP12.02□□□□□ -0.49
MSH6-208ENST00000493177 SNCBQ16143 134 aa12.02□□□□□ -0.49
MSH6-208ENST00000493177 SGCBQ16585 318 aa12.02□□□□□ -0.49
MSH6-208ENST00000493177 ZNF74Q16587 644 aa12.02□□□□□ -0.49
MSH6-208ENST00000493177 FAM69AQ5T7M9 428 aa12.02□□□□□ -0.49
MSH6-208ENST00000493177 ANKRD34AQ69YU3 496 aa12.02□□□□□ -0.49
MSH6-208ENST00000493177 VASNQ6EMK4 673 aa12.02□□□□□ -0.49
MSH6-208ENST00000493177 C1orf94Q6P1W5 598 aa12.02□□□□□ -0.49
MSH6-208ENST00000493177 MEX3BQ6ZN04 569 aaKnown RBP12.02□□□□□ -0.49
MSH6-208ENST00000493177 TMPPEQ6ZT21 453 aa12.02□□□□□ -0.49
MSH6-208ENST00000493177 HIST3H2AQ7L7L0 130 aa12.02□□□□□ -0.49
MSH6-208ENST00000493177 GGNQ86UU5 652 aa12.02□□□□□ -0.49
MSH6-208ENST00000493177 GALNT4Q8N4A0 578 aa12.02□□□□□ -0.49
MSH6-208ENST00000493177 CBR4Q8N4T8 237 aa12.02□□□□□ -0.49
MSH6-208ENST00000493177 MAGEE2Q8TD90 523 aaPredicted RBP12.02□□□□□ -0.49
MSH6-208ENST00000493177 HIST1H2ACQ93077 130 aa12.02□□□□□ -0.49
MSH6-208ENST00000493177 TIMP4Q99727 224 aa12.02□□□□□ -0.49
MSH6-208ENST00000493177 RBM4BQ9BQ04 359 aaKnown RBP12.02□□□□□ -0.49
MSH6-208ENST00000493177 PTDSS2Q9BVG9 487 aa12.02□□□□□ -0.49
MSH6-208ENST00000493177 RBM4Q9BWF3 364 aaKnown RBP12.02□□□□□ -0.49
MSH6-208ENST00000493177 ASPNQ9BXN1 380 aa12.02□□□□□ -0.49
MSH6-208ENST00000493177 COQ10BQ9H8M1 238 aa12.02□□□□□ -0.49
MSH6-208ENST00000493177 NANSQ9NR45 359 aa12.02□□□□□ -0.49
MSH6-208ENST00000493177 ORC6Q9Y5N6 252 aa12.02□□□□□ -0.49
MSH6-208ENST00000493177 DOPEY1Q5JWR5 2465 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 HTR3EA5X5Y0 456 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 UNC119BA6NIH7 251 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 LIPT2A6NK58 231 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 SOCS2O14508 198 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 EI24O14681 340 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 CASQ2O14958 399 aaPredicted RBP12.01□□□□□ -0.49
MSH6-208ENST00000493177 CXCL13O43927 109 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 PMS2P2O95744 297 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 ADAP00813 363 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 MT-ATP6P00846 226 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 IGF2P01344 180 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 BGLAPP02818 100 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms