RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 SPRYD4Q8WW59 207 aaPredicted RBP12.74□□□□□ -0.37
PTPN7-216ENST00000492977 TAAR9Q96RI9 348 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 CDC6Q99741 560 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 ALG8Q9BVK2 526 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 DDA1Q9BW61 102 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 NMNAT2Q9BZQ4 307 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 WDR12Q9GZL7 423 aaKnown RBP12.74□□□□□ -0.37
PTPN7-216ENST00000492977 NXF2Q9GZY0 626 aaKnown RBP12.74□□□□□ -0.37
PTPN7-216ENST00000492977 ADGRL4Q9HBW9 690 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 HMG20AQ9NP66 347 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 PALMDQ9NP74 551 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 KLHL1Q9NR64 748 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 FBXL4Q9UKA2 621 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 PADI1Q9ULC6 663 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 SF3B6Q9Y3B4 125 aaKnown RBP12.74□□□□□ -0.37
PTPN7-216ENST00000492977 HS3ST3B1Q9Y662 390 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 IGLV3-32A0A0A0MS00 114 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 TEX51A0A1B0GUA7 166 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 A0A1W2PQ72 361 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 TMEM72A0PK05 275 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 ZNF670-ZNF695F2Z2N8 137 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 SLC30A4O14863 429 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 PLD2O14939 933 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 DKK1O94907 266 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 SDHAP31040 664 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 CD79BP40259 229 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 APOBEC1P41238 236 aaKnown RBP12.73□□□□□ -0.37
PTPN7-216ENST00000492977 DIO1P49895 249 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 SLC25A1P53007 311 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 INSM1Q01101 510 aaPredicted RBP12.73□□□□□ -0.37
PTPN7-216ENST00000492977 RPL18Q07020 188 aaKnown RBP12.73□□□□□ -0.37
PTPN7-216ENST00000492977 ZNF846Q147U1 533 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 SF3A2Q15428 464 aaKnown RBP12.73□□□□□ -0.37
PTPN7-216ENST00000492977 FAM69AQ5T7M9 428 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 GPR139Q6DWJ6 353 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 POMZP3Q6PJE2 187 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 C6orf15Q6UXA7 325 aaPredicted RBP12.73□□□□□ -0.37
PTPN7-216ENST00000492977 RAB11FIP2Q7L804 512 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 OR10H4Q8NGA5 316 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 OR6S1Q8NH40 331 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 SMPDL3BQ92485 455 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 SPACA9Q96E40 222 aaPredicted RBP12.73□□□□□ -0.37
PTPN7-216ENST00000492977 DTNBP1Q96EV8 351 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 LIN37Q96GY3 246 aaPredicted RBP12.73□□□□□ -0.37
PTPN7-216ENST00000492977 RASL10BQ96S79 203 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 NMNAT3Q96T66 252 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 COQ7Q99807 217 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 ASPNQ9BXN1 380 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 AKIP1Q9NQ31 210 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 BABAM2Q9NXR7 383 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 KLRF1Q9NZS2 232 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 PCDHGB7Q9Y5F8 929 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 KMT2EQ8IZD2 1858 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 BDP1A6H8Y1 2624 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 TEX13CA0A0J9YWL9 993 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 ETV2O00321 342 aaPredicted RBP12.73□□□□□ -0.37
PTPN7-216ENST00000492977 OR2T1O43869 369 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 GYPBP06028 91 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 PRKCAP17252 672 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 MAP2K6P52564 334 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 ZNF791Q3KP31 576 aaPredicted RBP12.73□□□□□ -0.37
PTPN7-216ENST00000492977 C1orf140Q5VVS0 124 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 CDCP2Q5VXM1 449 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 CD200R1LQ6Q8B3 271 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 NDUFAF7Q7L592 441 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 JAZF1Q86VZ6 243 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 GPALPP1Q8IXQ4 340 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 RASD2Q96D21 266 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 Q96M85 177 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 TIMP4Q99727 224 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 PTDSS2Q9BVG9 487 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 CDADC1Q9BWV3 514 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 METTL7AQ9H8H3 244 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 GALNT9Q9HCQ5 603 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 TMEM9BQ9NQ34 198 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 TXNL4BQ9NX01 149 aaKnown RBP12.73□□□□□ -0.37
PTPN7-216ENST00000492977 PPP4R1LQ9P1A2 415 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 NOX1Q9Y5S8 564 aa12.73□□□□□ -0.37
PTPN7-216ENST00000492977 OR6C68A6NDL8 312 aa12.72□□□□□ -0.37
PTPN7-216ENST00000492977 TP53I11O14683 189 aa12.72□□□□□ -0.37
PTPN7-216ENST00000492977 LALBAP00709 142 aa12.72□□□□□ -0.37
PTPN7-216ENST00000492977 MT-ND5P03915 603 aa12.72□□□□□ -0.37
PTPN7-216ENST00000492977 RAB40ALP0C0E4 278 aa12.72□□□□□ -0.37
PTPN7-216ENST00000492977 OR2T7P0C7T2 308 aa12.72□□□□□ -0.37
PTPN7-216ENST00000492977 SPI1P17947 270 aa12.72□□□□□ -0.37
PTPN7-216ENST00000492977 FGF9P31371 208 aaPredicted RBP12.72□□□□□ -0.37
PTPN7-216ENST00000492977 PTGDSP41222 190 aa12.72□□□□□ -0.37
PTPN7-216ENST00000492977 CDKN2AP42771 156 aaKnown RBP12.72□□□□□ -0.37
PTPN7-216ENST00000492977 SNTA1Q13424 505 aa12.72□□□□□ -0.37
PTPN7-216ENST00000492977 SGCBQ16585 318 aa12.72□□□□□ -0.37
PTPN7-216ENST00000492977 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.72□□□□□ -0.37
PTPN7-216ENST00000492977 CCDC157Q569K6 752 aa12.72□□□□□ -0.37
PTPN7-216ENST00000492977 C1QL3Q5VWW1 255 aa12.72□□□□□ -0.37
PTPN7-216ENST00000492977 OR5M10Q6IEU7 315 aa12.72□□□□□ -0.37
PTPN7-216ENST00000492977 KLBQ86Z14 1044 aa12.72□□□□□ -0.37
PTPN7-216ENST00000492977 OR11G2Q8NGC1 345 aa12.72□□□□□ -0.37
PTPN7-216ENST00000492977 OR10G3Q8NGC4 313 aa12.72□□□□□ -0.37
PTPN7-216ENST00000492977 OR2T27Q8NH04 317 aa12.72□□□□□ -0.37
PTPN7-216ENST00000492977 OR5J2Q8NH18 312 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms