RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 KIAA1161Q6NSJ0 714 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 STOX1Q6ZVD7 989 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 CCDC50Q8IVM0 306 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 OR1L6Q8NGR2 347 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 AENQ8WTP8 325 aaKnown RBP4.32□□□□□ -1.72
SND1-216ENST00000492840 TCEAL3Q969E4 200 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 ZNF524Q96C55 264 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 RAB3CQ96E17 227 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 CNRIP1Q96F85 164 aaPredicted RBP4.32□□□□□ -1.72
SND1-216ENST00000492840 TIMD4Q96H15 378 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 NSMCE3Q96MG7 304 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 TSNARE1Q96NA8 513 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 DNTTIP1Q9H147 329 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 STMN4Q9H169 189 aaPredicted RBP4.32□□□□□ -1.72
SND1-216ENST00000492840 LIME1Q9H400 295 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 XKR8Q9H6D3 395 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 WDR41Q9HAD4 459 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 CYP3A43Q9HB55 503 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 CIDEBQ9UHD4 219 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 VANGL2Q9ULK5 521 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 PACSIN2Q9UNF0 486 aaPredicted RBP4.32□□□□□ -1.72
SND1-216ENST00000492840 TRAF3IP3Q9Y228 551 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 AK6Q9Y3D8 172 aaKnown RBP4.32□□□□□ -1.72
SND1-216ENST00000492840 OARD1Q9Y530 152 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 PCDHGB1Q9Y5G3 927 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 WDR81Q562E7 1941 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 DMXL2Q8TDJ6 3036 aa4.32□□□□□ -1.72
SND1-216ENST00000492840 ITPR3Q14573 2671 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 ABCB11O95342 1321 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 ZNF532Q9HCE3 1301 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 IGSF9BQ9UPX0 1349 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 A0A087WW49 117 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 TRAV25A0A0B4J276 109 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 MYMKA6NI61 221 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 OR6C65A6NJZ3 312 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 GOLGA8TH3BQL2 631 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 ZNF749O43361 778 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 FGF17O60258 216 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 CD48P09326 243 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 RHOXF2BP0C7M4 288 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 MCF2P10911 925 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 TNNI1P19237 187 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 CHMLP26374 656 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 CSNK1EP49674 416 aaKnown RBP4.31□□□□□ -1.72
SND1-216ENST00000492840 RAB9AP51151 201 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 RGS8P57771 180 aaPredicted RBP4.31□□□□□ -1.72
SND1-216ENST00000492840 ACY1Q03154 408 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 ZNF33BQ06732 778 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 RIPPLY1Q0D2K3 151 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 RAB40BQ12829 278 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 DNAJC3Q13217 504 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 CHRNA6Q15825 494 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 PPP1R3AQ16821 1122 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 UPP1Q16831 310 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 SBK1Q52WX2 424 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 HIKESHIQ53FT3 197 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 FAHD2BQ6P2I3 314 aaPredicted RBP4.31□□□□□ -1.72
SND1-216ENST00000492840 TMEM220Q6QAJ8 160 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 GDPD4Q6W3E5 623 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 STAC2Q6ZMT1 411 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 C3P1Q6ZMU1 363 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 NUFIP2Q7Z417 695 aaKnown RBP4.31□□□□□ -1.72
SND1-216ENST00000492840 SERPINA9Q86WD7 417 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 SLC35F2Q8IXU6 374 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 ZNF781Q8N8C0 355 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 OR10G7Q8NGN6 311 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 HCAR2Q8TDS4 363 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 NUDCD2Q8WVJ2 157 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 FGF14Q92915 247 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 SLC38A4Q969I6 547 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 FAHD2AQ96GK7 314 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 IL4I1Q96RQ9 567 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 RHOXF2Q9BQY4 288 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 NIPSNAP3BQ9BS92 247 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 DPH7Q9BTV6 452 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 SPATA16Q9BXB7 569 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 SUDS3Q9H7L9 328 aaPredicted RBP4.31□□□□□ -1.72
SND1-216ENST00000492840 FAM120CQ9NX05 1096 aaKnown RBP4.31□□□□□ -1.72
SND1-216ENST00000492840 RCOR3Q9P2K3 495 aaPredicted RBP4.31□□□□□ -1.72
SND1-216ENST00000492840 PSMC3IPQ9P2W1 217 aaPredicted RBP4.31□□□□□ -1.72
SND1-216ENST00000492840 PEF1Q9UBV8 284 aaKnown RBP4.31□□□□□ -1.72
SND1-216ENST00000492840 IKZF2Q9UKS7 526 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 TBC1D24Q9ULP9 559 aa4.31□□□□□ -1.72
SND1-216ENST00000492840 NDRG2Q9UN36 371 aaKnown RBP4.31□□□□□ -1.72
SND1-216ENST00000492840 ASCC3Q8N3C0 2202 aaKnown RBP4.31□□□□□ -1.72
SND1-216ENST00000492840 COL5A1P20908 1838 aaPredicted RBP4.3□□□□□ -1.72
SND1-216ENST00000492840 COL4A2P08572 1712 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 TRBV7-9A0A0J9YWB2 115 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 SPAARA0A1B0GVQ0 90 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 IGLON5A6NGN9 336 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 C11orf98E9PRG8 122 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 P2RY10O00398 339 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 LSM1O15116 133 aaKnown RBP4.3□□□□□ -1.72
SND1-216ENST00000492840 H6PDO95479 791 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 PRSS1P07477 247 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 HOXA6P31267 233 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 CSRP3P50461 194 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 HLCSP50747 726 aa4.3□□□□□ -1.72
SND1-216ENST00000492840 CRYBB1P53674 252 aaPredicted RBP4.3□□□□□ -1.72
SND1-216ENST00000492840 ERVK-16P61578 105 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms