RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 CBLP22681 906 aa21.73■■□□□ 1.07
UPF3A-209ENST00000492270 PPA1Q15181 289 aa21.73■■□□□ 1.07
UPF3A-209ENST00000492270 NCMAPQ5T1S8 102 aa21.73■■□□□ 1.07
UPF3A-209ENST00000492270 AAED1Q7RTV5 226 aa21.73■■□□□ 1.07
UPF3A-209ENST00000492270 OR6T1Q8NGN1 323 aa21.73■■□□□ 1.07
UPF3A-209ENST00000492270 VANGL1Q8TAA9 524 aaPredicted RBP21.73■■□□□ 1.07
UPF3A-209ENST00000492270 RCN3Q96D15 328 aa21.73■■□□□ 1.07
UPF3A-209ENST00000492270 SLC47A1Q96FL8 570 aa21.73■■□□□ 1.07
UPF3A-209ENST00000492270 MCHR1Q99705 422 aa21.73■■□□□ 1.07
UPF3A-209ENST00000492270 ECSITQ9BQ95 431 aa21.73■■□□□ 1.07
UPF3A-209ENST00000492270 TAS2R16Q9NYV7 291 aa21.73■■□□□ 1.07
UPF3A-209ENST00000492270 NPAP1Q9NZP6 1156 aa21.73■■□□□ 1.07
UPF3A-209ENST00000492270 UPB1Q9UBR1 384 aa21.73■■□□□ 1.07
UPF3A-209ENST00000492270 A0A087WUJ7 227 aa21.72■■□□□ 1.07
UPF3A-209ENST00000492270 A0A1W2PR80 420 aa21.72■■□□□ 1.07
UPF3A-209ENST00000492270 CIB4A0PJX0 185 aa21.72■■□□□ 1.07
UPF3A-209ENST00000492270 OR5H1A6NKK0 313 aa21.72■■□□□ 1.07
UPF3A-209ENST00000492270 FZD7O75084 574 aa21.72■■□□□ 1.07
UPF3A-209ENST00000492270 NPPAP01160 153 aa21.72■■□□□ 1.07
UPF3A-209ENST00000492270 C8BP07358 591 aa21.72■■□□□ 1.07
UPF3A-209ENST00000492270 GTF2E2P29084 291 aaKnown RBP21.72■■□□□ 1.07
UPF3A-209ENST00000492270 CDH12P55289 794 aa21.72■■□□□ 1.07
UPF3A-209ENST00000492270 TIMM23BQ5SRD1 257 aa21.72■■□□□ 1.07
UPF3A-209ENST00000492270 CREB3L2Q70SY1 520 aa21.72■■□□□ 1.07
UPF3A-209ENST00000492270 EPHX4Q8IUS5 362 aa21.72■■□□□ 1.07
UPF3A-209ENST00000492270 ZNF583Q96ND8 569 aa21.72■■□□□ 1.07
UPF3A-209ENST00000492270 CCL19Q99731 98 aa21.72■■□□□ 1.07
UPF3A-209ENST00000492270 SH3GL1Q99961 368 aa21.72■■□□□ 1.07
UPF3A-209ENST00000492270 USB1Q9BQ65 265 aaKnown RBP21.72■■□□□ 1.07
UPF3A-209ENST00000492270 EVA1AQ9H8M9 152 aa21.72■■□□□ 1.07
UPF3A-209ENST00000492270 BEX4Q9NWD9 120 aaPredicted RBP21.72■■□□□ 1.07
UPF3A-209ENST00000492270 RASD1Q9Y272 281 aa21.72■■□□□ 1.07
UPF3A-209ENST00000492270 ARID1AO14497 2285 aa21.71■■□□□ 1.07
UPF3A-209ENST00000492270 TRAV36DV7A0A075B6V5 113 aa21.71■■□□□ 1.07
UPF3A-209ENST00000492270 DPRXA6NFQ7 191 aa21.71■■□□□ 1.07
UPF3A-209ENST00000492270 CPSF4LA6NMK7 179 aaKnown RBP21.71■■□□□ 1.07
UPF3A-209ENST00000492270 M0R082 166 aa21.71■■□□□ 1.07
UPF3A-209ENST00000492270 SLC22A2O15244 555 aa21.71■■□□□ 1.07
UPF3A-209ENST00000492270 CLOCKO15516 846 aa21.71■■□□□ 1.07
UPF3A-209ENST00000492270 VAMP5O95183 116 aa21.71■■□□□ 1.07
UPF3A-209ENST00000492270 GRPRP30550 384 aa21.71■■□□□ 1.07
UPF3A-209ENST00000492270 SELENOPP49908 381 aa21.71■■□□□ 1.07
UPF3A-209ENST00000492270 BSPH1Q075Z2 132 aa21.71■■□□□ 1.07
UPF3A-209ENST00000492270 LGALS3BPQ08380 585 aa21.71■■□□□ 1.07
UPF3A-209ENST00000492270 GABRA6Q16445 453 aa21.71■■□□□ 1.07
UPF3A-209ENST00000492270 FAM69AQ5T7M9 428 aa21.71■■□□□ 1.07
UPF3A-209ENST00000492270 INTS11Q5TA45 600 aaKnown RBP21.71■■□□□ 1.07
UPF3A-209ENST00000492270 C20orf204Q6ZNR8 217 aa21.71■■□□□ 1.07
UPF3A-209ENST00000492270 CCDC80Q76M96 950 aa21.71■■□□□ 1.07
UPF3A-209ENST00000492270 TSPYL5Q86VY4 417 aaPredicted RBP21.71■■□□□ 1.07
UPF3A-209ENST00000492270 TGIF2LYQ8IUE0 185 aa21.71■■□□□ 1.07
UPF3A-209ENST00000492270 PCYOX1LQ8NBM8 494 aa21.71■■□□□ 1.07
UPF3A-209ENST00000492270 OR52N5Q8NH56 324 aa21.71■■□□□ 1.07
UPF3A-209ENST00000492270 LILRB1Q8NHL6 650 aaPredicted RBP21.71■■□□□ 1.07
UPF3A-209ENST00000492270 ZNF417Q8TAU3 575 aa21.71■■□□□ 1.07
UPF3A-209ENST00000492270 SLC26A7Q8TE54 656 aa21.71■■□□□ 1.07
UPF3A-209ENST00000492270 ZNF587Q96SQ5 575 aaPredicted RBP21.71■■□□□ 1.07
UPF3A-209ENST00000492270 SLCO5A1Q9H2Y9 848 aa21.71■■□□□ 1.07
UPF3A-209ENST00000492270 ESRP2Q9H6T0 727 aaKnown RBP21.71■■□□□ 1.07
UPF3A-209ENST00000492270 NGBQ9NPG2 151 aa21.71■■□□□ 1.07
UPF3A-209ENST00000492270 SELENONQ9NZV5 590 aa21.71■■□□□ 1.07
UPF3A-209ENST00000492270 RNF115Q9Y4L5 304 aa21.71■■□□□ 1.07
UPF3A-209ENST00000492270 FLNAP21333 2647 aaKnown RBP21.7■■□□□ 1.06
UPF3A-209ENST00000492270 SEC24CP53992 1094 aa21.7■■□□□ 1.06
UPF3A-209ENST00000492270 ADAM8P78325 824 aa21.7■■□□□ 1.06
UPF3A-209ENST00000492270 LTBQ06643 244 aa21.7■■□□□ 1.06
UPF3A-209ENST00000492270 ENTPD8Q5MY95 495 aa21.7■■□□□ 1.06
UPF3A-209ENST00000492270 C5orf46Q6UWT4 87 aa21.7■■□□□ 1.06
UPF3A-209ENST00000492270 KRTAP1-3Q8IUG1 177 aa21.7■■□□□ 1.06
UPF3A-209ENST00000492270 AKAP1Q92667 903 aaKnown RBP eCLIP21.7■■□□□ 1.06
UPF3A-209ENST00000492270 NEUROG1Q92886 237 aa21.7■■□□□ 1.06
UPF3A-209ENST00000492270 MUCL1Q96DR8 90 aa21.7■■□□□ 1.06
UPF3A-209ENST00000492270 GID8Q9NWU2 228 aa21.7■■□□□ 1.06
UPF3A-209ENST00000492270 B3GAT1Q9P2W7 334 aa21.7■■□□□ 1.06
UPF3A-209ENST00000492270 HS3ST1O14792 307 aa21.69■■□□□ 1.06
UPF3A-209ENST00000492270 OR2T1O43869 369 aa21.69■■□□□ 1.06
UPF3A-209ENST00000492270 FMO6PO60774 539 aa21.69■■□□□ 1.06
UPF3A-209ENST00000492270 THY1P04216 161 aa21.69■■□□□ 1.06
UPF3A-209ENST00000492270 CD3EP07766 207 aa21.69■■□□□ 1.06
UPF3A-209ENST00000492270 NIPAL3Q6P499 406 aa21.69■■□□□ 1.06
UPF3A-209ENST00000492270 WDR88Q6ZMY6 472 aa21.69■■□□□ 1.06
UPF3A-209ENST00000492270 P2RY8Q86VZ1 359 aa21.69■■□□□ 1.06
UPF3A-209ENST00000492270 WFDC11Q8NEX6 87 aa21.69■■□□□ 1.06
UPF3A-209ENST00000492270 KBTBD8Q8NFY9 601 aa21.69■■□□□ 1.06
UPF3A-209ENST00000492270 HEATR1Q9H583 2144 aaKnown RBP21.69■■□□□ 1.06
UPF3A-209ENST00000492270 GMPR2Q9P2T1 348 aaKnown RBP21.69■■□□□ 1.06
UPF3A-209ENST00000492270 SLC25A15Q9Y619 301 aa21.69■■□□□ 1.06
UPF3A-209ENST00000492270 LRRN3E7EW58 273 aa21.68■■□□□ 1.06
UPF3A-209ENST00000492270 AIM2O14862 343 aa21.68■■□□□ 1.06
UPF3A-209ENST00000492270 LYPD3O95274 346 aa21.68■■□□□ 1.06
UPF3A-209ENST00000492270 BGLAPP02818 100 aa21.68■■□□□ 1.06
UPF3A-209ENST00000492270 COX4I1P13073 169 aa21.68■■□□□ 1.06
UPF3A-209ENST00000492270 TNFRSF1BP20333 461 aa21.68■■□□□ 1.06
UPF3A-209ENST00000492270 SWT1Q5T5J6 900 aaKnown RBP21.68■■□□□ 1.06
UPF3A-209ENST00000492270 ADAM5Q6NVV9 412 aa21.68■■□□□ 1.06
UPF3A-209ENST00000492270 ZNF613Q6PF04 617 aa21.68■■□□□ 1.06
UPF3A-209ENST00000492270 SPATA21Q7Z572 469 aa21.68■■□□□ 1.06
UPF3A-209ENST00000492270 TREML1Q86YW5 311 aa21.68■■□□□ 1.06
UPF3A-209ENST00000492270 RP9Q8TA86 221 aaKnown RBP21.68■■□□□ 1.06
UPF3A-209ENST00000492270 PIGTQ969N2 578 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms