RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 CTBP2P56545 445 aa9.81□□□□□ -0.84
TMEM39A-211ENST00000491685 CSNK2A1P68400 391 aaPredicted RBP9.81□□□□□ -0.84
TMEM39A-211ENST00000491685 OR1Q1Q15612 314 aa9.81□□□□□ -0.84
TMEM39A-211ENST00000491685 TOMM34Q15785 309 aaPredicted RBP9.81□□□□□ -0.84
TMEM39A-211ENST00000491685 ELOA3BQ3SY89 546 aa9.81□□□□□ -0.84
TMEM39A-211ENST00000491685 ALG10BQ5I7T1 473 aa9.81□□□□□ -0.84
TMEM39A-211ENST00000491685 C3orf33Q6P1S2 294 aa9.81□□□□□ -0.84
TMEM39A-211ENST00000491685 ZNF613Q6PF04 617 aa9.81□□□□□ -0.84
TMEM39A-211ENST00000491685 C5orf46Q6UWT4 87 aa9.81□□□□□ -0.84
TMEM39A-211ENST00000491685 RRM2BQ7LG56 351 aa9.81□□□□□ -0.84
TMEM39A-211ENST00000491685 LSRQ86X29 649 aaPredicted RBP9.81□□□□□ -0.84
TMEM39A-211ENST00000491685 CARM1Q86X55 608 aa9.81□□□□□ -0.84
TMEM39A-211ENST00000491685 ELOA3Q8NG57 546 aa9.81□□□□□ -0.84
TMEM39A-211ENST00000491685 VANGL1Q8TAA9 524 aaPredicted RBP9.81□□□□□ -0.84
TMEM39A-211ENST00000491685 GEMIN6Q8WXD5 167 aaKnown RBP9.81□□□□□ -0.84
TMEM39A-211ENST00000491685 OSTF1Q92882 214 aa9.81□□□□□ -0.84
TMEM39A-211ENST00000491685 ZNF524Q96C55 264 aa9.81□□□□□ -0.84
TMEM39A-211ENST00000491685 ZHX1-C8orf76Q96EF9 292 aa9.81□□□□□ -0.84
TMEM39A-211ENST00000491685 PYURFQ96I23 114 aa9.81□□□□□ -0.84
TMEM39A-211ENST00000491685 ARHGDIGQ99819 225 aa9.81□□□□□ -0.84
TMEM39A-211ENST00000491685 CADM1Q9BY67 442 aaKnown RBP9.81□□□□□ -0.84
TMEM39A-211ENST00000491685 POTEKPQ9BYX7 375 aa9.81□□□□□ -0.84
TMEM39A-211ENST00000491685 KLHL4Q9C0H6 718 aa9.81□□□□□ -0.84
TMEM39A-211ENST00000491685 CHRNA9Q9UGM1 479 aa9.81□□□□□ -0.84
TMEM39A-211ENST00000491685 USP22Q9UPT9 525 aa9.81□□□□□ -0.84
TMEM39A-211ENST00000491685 TMED7Q9Y3B3 224 aa9.81□□□□□ -0.84
TMEM39A-211ENST00000491685 JMJD1CQ15652 2540 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 TRAPPC13A5PLN9 417 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 A8MVM7 634 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 ETV2O00321 342 aaPredicted RBP9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 OR2T1O43869 369 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 EFNA2O43921 213 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 CIB2O75838 187 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 PLAUP00749 431 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 NQO1P15559 274 aaKnown RBP9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 CCNA2P20248 432 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 MSX2P35548 267 aaPredicted RBP9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 SMIM11AP58511 58 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 TAS2R41P59536 307 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 ST3GAL3Q11203 375 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 FOXF1Q12946 379 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 CEACAM7Q14002 265 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 ACKR1Q16570 336 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 NRF1Q16656 503 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 ENTPD8Q5MY95 495 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 SWT1Q5T5J6 900 aaKnown RBP9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 HBMQ6B0K9 141 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 TTC33Q6PID6 262 aaPredicted RBP9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 STAC2Q6ZMT1 411 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 C20orf204Q6ZNR8 217 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 PRIMA1Q86XR5 153 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 ADGRG3Q86Y34 549 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 FAM156AQ8NDB6 213 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 GPR32P1Q8NGA4 272 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 OR6K3Q8NGY3 331 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 SPATA3Q8NHX4 192 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 PERPQ96FX8 193 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 MPP4Q96JB8 637 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 KLHL15Q96M94 604 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 HS6ST2Q96MM7 605 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 EPYCQ99645 322 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 CCL19Q99731 98 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 PIP5K1AQ99755 562 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 NAA11Q9BSU3 229 aaPredicted RBP9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 FNDC11Q9BVV2 318 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 TAPBPLQ9BX59 468 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 SRXN1Q9BYN0 137 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 PCDHAC1Q9H158 963 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 CTPS2Q9NRF8 586 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 OSGIN1Q9UJX0 560 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 TRAPPC4Q9Y296 219 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 HDGFL3Q9Y3E1 203 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 CHST2Q9Y4C5 530 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 CSPG4Q6UVK1 2322 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 ZANQ9Y493 2812 aa9.8□□□□□ -0.84
TMEM39A-211ENST00000491685 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 HTR3EA5X5Y0 456 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 TRIM64A6NGJ6 449 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 ERICH4A6NGS2 130 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 TRIM64BA6NI03 449 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 H7C1Q1 480 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 M0R3H8 397 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 SULT2B1O00204 365 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 ADAMDEC1O15204 470 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 KLF4O43474 513 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 FRS3O43559 492 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 SMPD2O60906 423 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 TMCC2O75069 709 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 PRKD3O94806 890 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 NTN1O95631 604 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 HEXAP06865 529 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 THRBP10828 461 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 UMPSP11172 480 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 AGTR1P30556 359 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 SFTPDP35247 375 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 OR1E2P47887 323 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 NR1H2P55055 460 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 RAC3P60763 192 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 HOXC5Q00444 222 aa9.79□□□□□ -0.84
TMEM39A-211ENST00000491685 CHRNB3Q05901 458 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms