RNA–Protein interactions for RNA: ENST00000490839.1

AGAP3-222, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-222	ENST00000490839	ZCCHC24	Q8N2G6	241 aa	Known RBP	13.2	□□□□□ -0.3
AGAP3-222	ENST00000490839	EPS8L3	Q8TE67	593 aa	Known RBP	13.2	□□□□□ -0.3
AGAP3-222	ENST00000490839	TRNT1	Q96Q11	434 aa	Known RBP	13.2	□□□□□ -0.3
AGAP3-222	ENST00000490839	TAPBPL	Q9BX59	468 aa		13.2	□□□□□ -0.3
AGAP3-222	ENST00000490839	MARCO	Q9UEW3	520 aa	Predicted RBP	13.2	□□□□□ -0.3
AGAP3-222	ENST00000490839		A0A096LPE4	126 aa		13.19	□□□□□ -0.3
AGAP3-222	ENST00000490839	PRSS51	A0A1B0GVH4	220 aa		13.19	□□□□□ -0.3
AGAP3-222	ENST00000490839		A0A1W2PPZ6	126 aa		13.19	□□□□□ -0.3
AGAP3-222	ENST00000490839	HMGN4	O00479	90 aa		13.19	□□□□□ -0.3
AGAP3-222	ENST00000490839	CBR1	P16152	277 aa		13.19	□□□□□ -0.3
AGAP3-222	ENST00000490839	EGR1	P18146	543 aa		13.19	□□□□□ -0.3
AGAP3-222	ENST00000490839	RPS4Y1	P22090	263 aa	Known RBP	13.19	□□□□□ -0.3
AGAP3-222	ENST00000490839	CXCR1	P25024	350 aa		13.19	□□□□□ -0.3
AGAP3-222	ENST00000490839	ARRB2	P32121	409 aa		13.19	□□□□□ -0.3
AGAP3-222	ENST00000490839	CHI3L1	P36222	383 aa	Predicted RBP	13.19	□□□□□ -0.3
AGAP3-222	ENST00000490839	IL1RL1	Q01638	556 aa		13.19	□□□□□ -0.3
AGAP3-222	ENST00000490839	MRPL2	Q5T653	305 aa	Known RBP	13.19	□□□□□ -0.3
AGAP3-222	ENST00000490839	NIPAL3	Q6P499	406 aa		13.19	□□□□□ -0.3
AGAP3-222	ENST00000490839	CREB3L2	Q70SY1	520 aa		13.19	□□□□□ -0.3
AGAP3-222	ENST00000490839	ANKRD46	Q86W74	232 aa		13.19	□□□□□ -0.3
AGAP3-222	ENST00000490839	ZNF440	Q8IYI8	595 aa		13.19	□□□□□ -0.3
AGAP3-222	ENST00000490839	C3orf56	Q8N813	242 aa		13.19	□□□□□ -0.3
AGAP3-222	ENST00000490839	VPS37A	Q8NEZ2	397 aa		13.19	□□□□□ -0.3
AGAP3-222	ENST00000490839	ZNF418	Q8TF45	676 aa	Predicted RBP	13.19	□□□□□ -0.3
AGAP3-222	ENST00000490839	CKAP2	Q8WWK9	683 aa		13.19	□□□□□ -0.3
AGAP3-222	ENST00000490839	ZIM3	Q96PE6	472 aa		13.19	□□□□□ -0.3
AGAP3-222	ENST00000490839	LINC00470	Q9BZP3	86 aa		13.19	□□□□□ -0.3
AGAP3-222	ENST00000490839	SLC38A1	Q9H2H9	487 aa		13.19	□□□□□ -0.3
AGAP3-222	ENST00000490839	ZDHHC2	Q9UIJ5	367 aa		13.19	□□□□□ -0.3
AGAP3-222	ENST00000490839	PRDM4	Q9UKN5	801 aa		13.19	□□□□□ -0.3
AGAP3-222	ENST00000490839	SPEF1	Q9Y4P9	236 aa		13.19	□□□□□ -0.3
AGAP3-222	ENST00000490839	IGHV2OR16-5	A0A0B4J2B6	119 aa		13.18	□□□□□ -0.3
AGAP3-222	ENST00000490839	TMEM129	A0AVI4	362 aa		13.18	□□□□□ -0.3
AGAP3-222	ENST00000490839	FRS3	O43559	492 aa		13.18	□□□□□ -0.3
AGAP3-222	ENST00000490839	UPK3A	O75631	287 aa		13.18	□□□□□ -0.3
AGAP3-222	ENST00000490839	CPSF4	O95639	269 aa	Known RBP	13.18	□□□□□ -0.3
AGAP3-222	ENST00000490839	CHRM4	P08173	479 aa		13.18	□□□□□ -0.3
AGAP3-222	ENST00000490839	IGFBP1	P08833	259 aa	Predicted RBP	13.18	□□□□□ -0.3
AGAP3-222	ENST00000490839	CELA3B	P08861	270 aa		13.18	□□□□□ -0.3
AGAP3-222	ENST00000490839	ADRA2A	P08913	450 aa		13.18	□□□□□ -0.3
AGAP3-222	ENST00000490839	TXNL4A	P83876	142 aa	Known RBP	13.18	□□□□□ -0.3
AGAP3-222	ENST00000490839	ROR2	Q01974	943 aa	Known RBP	13.18	□□□□□ -0.3
AGAP3-222	ENST00000490839	PRAMEF8	Q5VWM4	474 aa		13.18	□□□□□ -0.3
AGAP3-222	ENST00000490839	PRAMEF7	Q5VXH5	474 aa		13.18	□□□□□ -0.3
AGAP3-222	ENST00000490839	SHQ1	Q6PI26	577 aa	Known RBP	13.18	□□□□□ -0.3
AGAP3-222	ENST00000490839	LRRC74B	Q6ZQY2	392 aa		13.18	□□□□□ -0.3
AGAP3-222	ENST00000490839	MYPOP	Q86VE0	399 aa	Predicted RBP	13.18	□□□□□ -0.3
AGAP3-222	ENST00000490839	EPHX4	Q8IUS5	362 aa		13.18	□□□□□ -0.3
AGAP3-222	ENST00000490839	GSPT2	Q8IYD1	628 aa	Known RBP	13.18	□□□□□ -0.3
AGAP3-222	ENST00000490839	CDK20	Q8IZL9	346 aa		13.18	□□□□□ -0.3
AGAP3-222	ENST00000490839	ANKFN1	Q8N957	763 aa		13.18	□□□□□ -0.3
AGAP3-222	ENST00000490839	ANKK1	Q8NFD2	765 aa		13.18	□□□□□ -0.3
AGAP3-222	ENST00000490839	UBLCP1	Q8WVY7	318 aa	Predicted RBP	13.18	□□□□□ -0.3
AGAP3-222	ENST00000490839	TMEM186	Q96B77	213 aa		13.18	□□□□□ -0.3
AGAP3-222	ENST00000490839	TESC	Q96BS2	214 aa		13.18	□□□□□ -0.3
AGAP3-222	ENST00000490839	SLC35A5	Q9BS91	424 aa		13.18	□□□□□ -0.3
AGAP3-222	ENST00000490839	DPY30	Q9C005	99 aa		13.18	□□□□□ -0.3
AGAP3-222	ENST00000490839	ADPRHL2	Q9NX46	363 aa		13.18	□□□□□ -0.3
AGAP3-222	ENST00000490839	RASD1	Q9Y272	281 aa		13.18	□□□□□ -0.3
AGAP3-222	ENST00000490839	SH3PXD2B	A1X283	911 aa		13.17	□□□□□ -0.3
AGAP3-222	ENST00000490839	TMEM89	A2RUT3	159 aa		13.17	□□□□□ -0.3
AGAP3-222	ENST00000490839		A8MVM7	634 aa		13.17	□□□□□ -0.3
AGAP3-222	ENST00000490839	FAM157A	C9JC47	383 aa		13.17	□□□□□ -0.3
AGAP3-222	ENST00000490839	LYNX1	G3V0Z9	82 aa		13.17	□□□□□ -0.3
AGAP3-222	ENST00000490839	DBI	P07108	87 aa	Known RBP	13.17	□□□□□ -0.3
AGAP3-222	ENST00000490839	LYNX1	P0DP58	116 aa		13.17	□□□□□ -0.3
AGAP3-222	ENST00000490839	IL7R	P16871	459 aa		13.17	□□□□□ -0.3
AGAP3-222	ENST00000490839	ARR3	P36575	388 aa		13.17	□□□□□ -0.3
AGAP3-222	ENST00000490839	ANXA11	P50995	505 aa	Known RBP	13.17	□□□□□ -0.3
AGAP3-222	ENST00000490839	SNTB2	Q13425	540 aa	Known RBP	13.17	□□□□□ -0.3
AGAP3-222	ENST00000490839	DAG1	Q14118	895 aa		13.17	□□□□□ -0.3
AGAP3-222	ENST00000490839	CASP8	Q14790	479 aa		13.17	□□□□□ -0.3
AGAP3-222	ENST00000490839	SYPL1	Q16563	259 aa		13.17	□□□□□ -0.3
AGAP3-222	ENST00000490839	DPY19L1	Q2PZI1	675 aa		13.17	□□□□□ -0.3
AGAP3-222	ENST00000490839	RNF130	Q86XS8	419 aa		13.17	□□□□□ -0.3
AGAP3-222	ENST00000490839	IL17RD	Q8NFM7	739 aa		13.17	□□□□□ -0.3
AGAP3-222	ENST00000490839	FAM216A	Q8WUB2	273 aa		13.17	□□□□□ -0.3
AGAP3-222	ENST00000490839	GCDH	Q92947	438 aa	Predicted RBP	13.17	□□□□□ -0.3
AGAP3-222	ENST00000490839	TPK1	Q9H3S4	243 aa		13.17	□□□□□ -0.3
AGAP3-222	ENST00000490839	MTHFD2L	Q9H903	347 aa	Predicted RBP	13.17	□□□□□ -0.3
AGAP3-222	ENST00000490839	HIF1AN	Q9NWT6	349 aa		13.17	□□□□□ -0.3
AGAP3-222	ENST00000490839	SLC17A7	Q9P2U7	560 aa		13.17	□□□□□ -0.3
AGAP3-222	ENST00000490839	RCE1	Q9Y256	329 aa		13.17	□□□□□ -0.3
AGAP3-222	ENST00000490839	GRIP1	Q9Y3R0	1128 aa		13.17	□□□□□ -0.3
AGAP3-222	ENST00000490839	PKD1L1	Q8TDX9	2849 aa		13.16	□□□□□ -0.3
AGAP3-222	ENST00000490839		A0A096LPI6	279 aa		13.16	□□□□□ -0.3
AGAP3-222	ENST00000490839	RPL36A-HNRNPH2	H7BZ11	118 aa		13.16	□□□□□ -0.3
AGAP3-222	ENST00000490839	TF	P02787	698 aa		13.16	□□□□□ -0.3
AGAP3-222	ENST00000490839	MSMB	P08118	114 aa		13.16	□□□□□ -0.3
AGAP3-222	ENST00000490839	NUDT17	P0C025	328 aa		13.16	□□□□□ -0.3
AGAP3-222	ENST00000490839	EVX1	P49640	407 aa		13.16	□□□□□ -0.3
AGAP3-222	ENST00000490839	HILS1	P60008	231 aa		13.16	□□□□□ -0.3
AGAP3-222	ENST00000490839	COPZ1	P61923	177 aa		13.16	□□□□□ -0.3
AGAP3-222	ENST00000490839	ARF1	P84077	181 aa	Known RBP	13.16	□□□□□ -0.3
AGAP3-222	ENST00000490839	NPRL3	Q12980	569 aa		13.16	□□□□□ -0.3
AGAP3-222	ENST00000490839	BNIP2	Q12982	314 aa		13.16	□□□□□ -0.3
AGAP3-222	ENST00000490839	SLC9B1	Q4ZJI4	515 aa		13.16	□□□□□ -0.3
AGAP3-222	ENST00000490839	C1orf140	Q5VVS0	124 aa		13.16	□□□□□ -0.3
AGAP3-222	ENST00000490839	WBP2NL	Q6ICG8	309 aa		13.16	□□□□□ -0.3
AGAP3-222	ENST00000490839	USP43	Q70EL4	1123 aa		13.16	□□□□□ -0.3

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