RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 ATP6V1G3Q96LB4 118 aa6.43□□□□□ -1.38
PRPF4B-208ENST00000490653 ZNF385AQ96PM9 386 aaKnown RBP6.43□□□□□ -1.38
PRPF4B-208ENST00000490653 TACO1Q9BSH4 297 aaKnown RBP6.43□□□□□ -1.38
PRPF4B-208ENST00000490653 OR10A4Q9H209 315 aa6.43□□□□□ -1.38
PRPF4B-208ENST00000490653 IKZF5Q9H5V7 419 aa6.43□□□□□ -1.38
PRPF4B-208ENST00000490653 GP6Q9HCN6 339 aa6.43□□□□□ -1.38
PRPF4B-208ENST00000490653 SLC7A10Q9NS82 523 aa6.43□□□□□ -1.38
PRPF4B-208ENST00000490653 CCDC167Q9P0B6 97 aa6.43□□□□□ -1.38
PRPF4B-208ENST00000490653 VAPAQ9P0L0 249 aa6.43□□□□□ -1.38
PRPF4B-208ENST00000490653 SEC14L4Q9UDX3 406 aa6.43□□□□□ -1.38
PRPF4B-208ENST00000490653 ZNF443Q9Y2A4 671 aaPredicted RBP6.43□□□□□ -1.38
PRPF4B-208ENST00000490653 HDGFL3Q9Y3E1 203 aa6.43□□□□□ -1.38
PRPF4B-208ENST00000490653 FLVCR1Q9Y5Y0 555 aa6.43□□□□□ -1.38
PRPF4B-208ENST00000490653 NBEAL1Q6ZS30 2694 aa6.43□□□□□ -1.38
PRPF4B-208ENST00000490653 DSPPQ9NZW4 1301 aa6.43□□□□□ -1.38
PRPF4B-208ENST00000490653 MXRA5Q9NR99 2828 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 A0A0G2JPF8 293 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 CIB4A0PJX0 185 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 LIPT2A6NK58 231 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 HNRNPCL2B2RXH8 293 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 HNRNPCL3B7ZW38 293 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 E7EQL1 145 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 OVOL3O00110 214 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 PDLIM1O00151 329 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 NR5A2O00482 541 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 ARHGEF9O43307 516 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 ZNF208O43345 1280 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 TPST2O60704 377 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 HNRNPCL1O60812 293 aaKnown RBP6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 CNOT4O95628 575 aaKnown RBP6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 CD3EP07766 207 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 RNASE1P07998 156 aaKnown RBP6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 HNRNPCL4P0DMR1 293 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 COX5AP20674 150 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 CBLP22681 906 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 PCSK6P29122 969 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 CLK1P49759 484 aaKnown RBP6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 ZNF83P51522 516 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 CSNK2A1P68400 391 aaPredicted RBP6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 EGR4Q05215 589 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 TNK1Q13470 666 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 SELPLGQ14242 412 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 SLC17A1Q14916 467 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 P2RY6Q15077 328 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 PDK3Q15120 406 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 PPA1Q15181 289 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 GABRA6Q16445 453 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 AGKQ53H12 422 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 ZNF311Q5JNZ3 666 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 FBXW9Q5XUX1 488 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 B3GLCTQ6Y288 498 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 LINGO2Q7L985 606 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 WDFY1Q8IWB7 410 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 CMIPQ8IY22 773 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 PEX5LQ8IYB4 626 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 KIRREL3Q8IZU9 778 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 UBE2J2Q8N2K1 259 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 NFKBIDQ8NI38 313 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 LRRC8CQ8TDW0 803 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 SMAP2Q8WU79 429 aaPredicted RBP6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 SLC25A43Q8WUT9 341 aaPredicted RBP6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 HTRA1Q92743 480 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 C3orf49Q96BT1 292 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 SPDL1Q96EA4 605 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 C7orf26Q96N11 449 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 MUS81Q96NY9 551 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 SPATA9Q9BWV2 254 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 POTEKPQ9BYX7 375 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 TRIM2Q9C040 744 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 TCF7L2Q9NQB0 619 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 MBNL3Q9NUK0 354 aaKnown RBP6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 ZNF701Q9NV72 531 aaPredicted RBP6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 P2RX2Q9UBL9 471 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 TRAPPC4Q9Y296 219 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 RNF115Q9Y4L5 304 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 MAGED1Q9Y5V3 778 aaPredicted RBP6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 SLC25A15Q9Y619 301 aa6.42□□□□□ -1.38
PRPF4B-208ENST00000490653 A0A096LPI6 279 aa6.41□□□□□ -1.38
PRPF4B-208ENST00000490653 TRBV5-3A0A0A0MS03 114 aa6.41□□□□□ -1.38
PRPF4B-208ENST00000490653 OR5H1A6NKK0 313 aa6.41□□□□□ -1.38
PRPF4B-208ENST00000490653 CCT8L1PA6NM43 557 aa6.41□□□□□ -1.38
PRPF4B-208ENST00000490653 INAFM1C9JVW0 142 aa6.41□□□□□ -1.38
PRPF4B-208ENST00000490653 FAAHO00519 579 aa6.41□□□□□ -1.38
PRPF4B-208ENST00000490653 POLR3GO15318 223 aaPredicted RBP6.41□□□□□ -1.38
PRPF4B-208ENST00000490653 NPIPB7O75200 414 aa6.41□□□□□ -1.38
PRPF4B-208ENST00000490653 MRPL33O75394 65 aaKnown RBP6.41□□□□□ -1.38
PRPF4B-208ENST00000490653 CDH2P19022 906 aaPredicted RBP6.41□□□□□ -1.38
PRPF4B-208ENST00000490653 GGT1P19440 569 aa6.41□□□□□ -1.38
PRPF4B-208ENST00000490653 CXCR1P25024 350 aa6.41□□□□□ -1.38
PRPF4B-208ENST00000490653 HTR2AP28223 471 aa6.41□□□□□ -1.38
PRPF4B-208ENST00000490653 IDUAP35475 653 aa6.41□□□□□ -1.38
PRPF4B-208ENST00000490653 MAGEA8P43361 318 aa6.41□□□□□ -1.38
PRPF4B-208ENST00000490653 HTR3AP46098 478 aa6.41□□□□□ -1.38
PRPF4B-208ENST00000490653 MRPL19P49406 292 aaKnown RBP6.41□□□□□ -1.38
PRPF4B-208ENST00000490653 SELENOPP49908 381 aa6.41□□□□□ -1.38
PRPF4B-208ENST00000490653 SLC16A1P53985 500 aa6.41□□□□□ -1.38
PRPF4B-208ENST00000490653 CRISP3P54108 245 aa6.41□□□□□ -1.38
PRPF4B-208ENST00000490653 ATP5J2P56134 94 aa6.41□□□□□ -1.38
PRPF4B-208ENST00000490653 SLC35A1P78382 337 aa6.41□□□□□ -1.38
PRPF4B-208ENST00000490653 ADRM1Q16186 407 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms