RNA–Protein interactions for RNA: ENST00000489836.1

AC055748.1-201, humanhuman

BASIC

Gene AC055748.1, Length 959 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055748.1-201ENST00000489836 SIRPAP78324 504 aa8.85□□□□□ -0.99
AC055748.1-201ENST00000489836 FAM27E3Q08E93 113 aa8.85□□□□□ -0.99
AC055748.1-201ENST00000489836 SELPLGQ14242 412 aa8.85□□□□□ -0.99
AC055748.1-201ENST00000489836 RNPS1Q15287 305 aaKnown RBP8.85□□□□□ -0.99
AC055748.1-201ENST00000489836 ZNF311Q5JNZ3 666 aa8.85□□□□□ -0.99
AC055748.1-201ENST00000489836 DHRS4L2Q6PKH6 230 aa8.85□□□□□ -0.99
AC055748.1-201ENST00000489836 FCRLAQ7L513 359 aa8.85□□□□□ -0.99
AC055748.1-201ENST00000489836 ZNF550Q7Z398 422 aa8.85□□□□□ -0.99
AC055748.1-201ENST00000489836 CNEP1R1Q8N9A8 125 aa8.85□□□□□ -0.99
AC055748.1-201ENST00000489836 ZNF610Q8N9Z0 462 aa8.85□□□□□ -0.99
AC055748.1-201ENST00000489836 ATP6V1C2Q8NEY4 427 aa8.85□□□□□ -0.99
AC055748.1-201ENST00000489836 NFKBIDQ8NI38 313 aa8.85□□□□□ -0.99
AC055748.1-201ENST00000489836 ABHD3Q8WU67 409 aa8.85□□□□□ -0.99
AC055748.1-201ENST00000489836 ARL5BQ96KC2 179 aa8.85□□□□□ -0.99
AC055748.1-201ENST00000489836 LURAP1Q96LR2 239 aa8.85□□□□□ -0.99
AC055748.1-201ENST00000489836 OR5B2Q96R09 309 aa8.85□□□□□ -0.99
AC055748.1-201ENST00000489836 PSD2Q9BQI7 771 aa8.85□□□□□ -0.99
AC055748.1-201ENST00000489836 ZNF559Q9BR84 538 aa8.85□□□□□ -0.99
AC055748.1-201ENST00000489836 KRTAP4-11Q9BYQ6 195 aa8.85□□□□□ -0.99
AC055748.1-201ENST00000489836 OPN3Q9H1Y3 402 aaPredicted RBP8.85□□□□□ -0.99
AC055748.1-201ENST00000489836 KAT8Q9H7Z6 458 aaKnown RBP8.85□□□□□ -0.99
AC055748.1-201ENST00000489836 BCO1Q9HAY6 547 aa8.85□□□□□ -0.99
AC055748.1-201ENST00000489836 ELOVL5Q9NYP7 299 aa8.85□□□□□ -0.99
AC055748.1-201ENST00000489836 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.85□□□□□ -0.99
AC055748.1-201ENST00000489836 CLEC4AQ9UMR7 237 aa8.85□□□□□ -0.99
AC055748.1-201ENST00000489836 PROCRQ9UNN8 238 aa8.85□□□□□ -0.99
AC055748.1-201ENST00000489836 TRAPPC4Q9Y296 219 aa8.85□□□□□ -0.99
AC055748.1-201ENST00000489836 TMED7Q9Y3B3 224 aa8.85□□□□□ -0.99
AC055748.1-201ENST00000489836 HDGFL3Q9Y3E1 203 aa8.85□□□□□ -0.99
AC055748.1-201ENST00000489836 SPIN1Q9Y657 262 aaPredicted RBP8.85□□□□□ -0.99
AC055748.1-201ENST00000489836 CACNA1DQ01668 2161 aa8.85□□□□□ -0.99
AC055748.1-201ENST00000489836 TMEM72A0PK05 275 aa8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 TUBAL3A6NHL2 446 aa8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 C5orf58C9J3I9 102 aa8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 FXYD1O00168 92 aa8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 SMAD9O15198 467 aaKnown RBP8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 DNPH1O43598 174 aa8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 TPST1O60507 370 aa8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 CTAG2O75638 210 aa8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 MFN2O95140 757 aa8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 UQCRBP14927 111 aa8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 KLK2P20151 261 aa8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 SLC6A2P23975 617 aa8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 TACR3P29371 465 aa8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 CD79BP40259 229 aa8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 CPA2P48052 419 aa8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 DIO1P49895 249 aa8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 CSNK2A1P68400 391 aaPredicted RBP8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 H3F3AP84243 136 aa8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 SF3A3Q12874 501 aaKnown RBP eCLIP8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 MYBPHQ13203 477 aa8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 NFYCQ13952 458 aa8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 SCARB2Q14108 478 aa8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 PDK3Q15120 406 aa8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 TRMT5Q32P41 509 aaKnown RBP8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 WBP2NLQ6ICG8 309 aa8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 NANOGP8Q6NSW7 305 aa8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 SERPINA11Q86U17 422 aa8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 MTDHQ86UE4 582 aaKnown RBP8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 COMTD1Q86VU5 262 aa8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 TUSC5Q8IXB3 177 aa8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 INTS1Q8N201 2190 aaKnown RBP8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 LSMEM1Q8N8F7 131 aa8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 HIPK4Q8NE63 616 aa8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 LINC01560Q8TB33 94 aa8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 DACH2Q96NX9 599 aa8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 TACO1Q9BSH4 297 aaKnown RBP8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 ARMC7Q9H6L4 198 aa8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 NANOGQ9H9S0 305 aa8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 KLHL13Q9P2N7 655 aa8.84□□□□□ -0.99
AC055748.1-201ENST00000489836 PKDREJQ9NTG1 2253 aa8.83□□□□□ -1
AC055748.1-201ENST00000489836 IGKV3D-15A0A087WSY6 115 aa8.83□□□□□ -1
AC055748.1-201ENST00000489836 IGHV3-15A0A0B4J1V0 119 aa8.83□□□□□ -1
AC055748.1-201ENST00000489836 A6NNC1 897 aa8.83□□□□□ -1
AC055748.1-201ENST00000489836 ZNF716A6NP11 495 aa8.83□□□□□ -1
AC055748.1-201ENST00000489836 ZNF724A8MTY0 619 aa8.83□□□□□ -1
AC055748.1-201ENST00000489836 BBIP1A8MTZ0 92 aa8.83□□□□□ -1
AC055748.1-201ENST00000489836 SULT2B1O00204 365 aa8.83□□□□□ -1
AC055748.1-201ENST00000489836 FZD7O75084 574 aa8.83□□□□□ -1
AC055748.1-201ENST00000489836 NPIPB7O75200 414 aa8.83□□□□□ -1
AC055748.1-201ENST00000489836 GOSR1O95249 250 aa8.83□□□□□ -1
AC055748.1-201ENST00000489836 PLGP00747 810 aaPredicted RBP8.83□□□□□ -1
AC055748.1-201ENST00000489836 YES1P07947 543 aa8.83□□□□□ -1
AC055748.1-201ENST00000489836 CCKARP32238 428 aa8.83□□□□□ -1
AC055748.1-201ENST00000489836 CTBP2P56545 445 aa8.83□□□□□ -1
AC055748.1-201ENST00000489836 MTPNP58546 118 aa8.83□□□□□ -1
AC055748.1-201ENST00000489836 SUMO1P63165 101 aaKnown RBP8.83□□□□□ -1
AC055748.1-201ENST00000489836 DMTNQ08495 405 aa8.83□□□□□ -1
AC055748.1-201ENST00000489836 CYLC2Q14093 348 aaPredicted RBP8.83□□□□□ -1
AC055748.1-201ENST00000489836 CAPRIN1Q14444 709 aaKnown RBP8.83□□□□□ -1
AC055748.1-201ENST00000489836 MAPRE2Q15555 327 aa8.83□□□□□ -1
AC055748.1-201ENST00000489836 GLIPR1L2Q4G1C9 344 aa8.83□□□□□ -1
AC055748.1-201ENST00000489836 REP15Q6BDI9 236 aa8.83□□□□□ -1
AC055748.1-201ENST00000489836 ABLIM2Q6H8Q1 611 aa8.83□□□□□ -1
AC055748.1-201ENST00000489836 PPP4R4Q6NUP7 873 aa8.83□□□□□ -1
AC055748.1-201ENST00000489836 NUFIP2Q7Z417 695 aaKnown RBP8.83□□□□□ -1
AC055748.1-201ENST00000489836 CALHM3Q86XJ0 350 aa8.83□□□□□ -1
AC055748.1-201ENST00000489836 KRT73Q86Y46 540 aa8.83□□□□□ -1
AC055748.1-201ENST00000489836 ZZZ3Q8IYH5 903 aa8.83□□□□□ -1
AC055748.1-201ENST00000489836 DTX3Q8N9I9 347 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms