RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 TMEM45BQ96B21 275 aa15.35■□□□□ 0.05
MDC1-206ENST00000489540 TPD52L3Q96J77 140 aa15.35■□□□□ 0.05
MDC1-206ENST00000489540 ARL8BQ9NVJ2 186 aa15.35■□□□□ 0.05
MDC1-206ENST00000489540 NDE1Q9NXR1 346 aa15.35■□□□□ 0.05
MDC1-206ENST00000489540 ADA2Q9NZK5 511 aa15.35■□□□□ 0.05
MDC1-206ENST00000489540 C6orf203Q9P0P8 240 aaPredicted RBP15.35■□□□□ 0.05
MDC1-206ENST00000489540 GMPR2Q9P2T1 348 aaKnown RBP15.35■□□□□ 0.05
MDC1-206ENST00000489540 CORINQ9Y5Q5 1042 aa15.35■□□□□ 0.05
MDC1-206ENST00000489540 ITPR2Q14571 2701 aa15.35■□□□□ 0.05
MDC1-206ENST00000489540 CRYGSP22914 178 aa15.34■□□□□ 0.05
MDC1-206ENST00000489540 TTC33Q6PID6 262 aaPredicted RBP15.34■□□□□ 0.05
MDC1-206ENST00000489540 CASP12Q6UXS9 341 aa15.34■□□□□ 0.05
MDC1-206ENST00000489540 SLC41A3Q96GZ6 507 aa15.34■□□□□ 0.05
MDC1-206ENST00000489540 SLC19A3Q9BZV2 496 aa15.34■□□□□ 0.05
MDC1-206ENST00000489540 SLC7A7Q9UM01 511 aa15.34■□□□□ 0.05
MDC1-206ENST00000489540 ABCA12Q86UK0 2595 aa15.34■□□□□ 0.05
MDC1-206ENST00000489540 LOC102725191A0A1B0GVB3 256 aa15.34■□□□□ 0.05
MDC1-206ENST00000489540 GMNNO75496 209 aa15.34■□□□□ 0.05
MDC1-206ENST00000489540 OR5F1O95221 314 aa15.34■□□□□ 0.05
MDC1-206ENST00000489540 LYPD3O95274 346 aa15.34■□□□□ 0.05
MDC1-206ENST00000489540 MT-ATP6P00846 226 aa15.34■□□□□ 0.05
MDC1-206ENST00000489540 HRGP04196 525 aa15.34■□□□□ 0.05
MDC1-206ENST00000489540 THY1P04216 161 aa15.34■□□□□ 0.05
MDC1-206ENST00000489540 TNFRSF1BP20333 461 aa15.34■□□□□ 0.05
MDC1-206ENST00000489540 EDNRAP25101 427 aa15.34■□□□□ 0.05
MDC1-206ENST00000489540 GRPRP30550 384 aa15.34■□□□□ 0.05
MDC1-206ENST00000489540 IFNA8P32881 189 aa15.34■□□□□ 0.05
MDC1-206ENST00000489540 OR1E2P47887 323 aa15.34■□□□□ 0.05
MDC1-206ENST00000489540 TAS2R41P59536 307 aa15.34■□□□□ 0.05
MDC1-206ENST00000489540 C16orf89Q6UX73 402 aa15.34■□□□□ 0.05
MDC1-206ENST00000489540 DEF8Q6ZN54 512 aa15.34■□□□□ 0.05
MDC1-206ENST00000489540 CREB3L2Q70SY1 520 aa15.34■□□□□ 0.05
MDC1-206ENST00000489540 BHLHA15Q7RTS1 189 aaPredicted RBP15.34■□□□□ 0.05
MDC1-206ENST00000489540 AAED1Q7RTV5 226 aa15.34■□□□□ 0.05
MDC1-206ENST00000489540 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.34■□□□□ 0.05
MDC1-206ENST00000489540 PGAM4Q8N0Y7 254 aa15.34■□□□□ 0.05
MDC1-206ENST00000489540 FITM2Q8N6M3 262 aa15.34■□□□□ 0.05
MDC1-206ENST00000489540 C10orf53Q8N6V4 93 aa15.34■□□□□ 0.05
MDC1-206ENST00000489540 ZIC4Q8N9L1 334 aa15.34■□□□□ 0.05
MDC1-206ENST00000489540 SCAIQ8N9R8 606 aa15.34■□□□□ 0.05
MDC1-206ENST00000489540 ADPRHL1Q8NDY3 354 aa15.34■□□□□ 0.05
MDC1-206ENST00000489540 HSD17B8Q92506 261 aa15.34■□□□□ 0.05
MDC1-206ENST00000489540 S100PBPQ96BU1 408 aa15.34■□□□□ 0.05
MDC1-206ENST00000489540 ZC3HAV1LQ96H79 300 aaKnown RBP15.34■□□□□ 0.05
MDC1-206ENST00000489540 OXGR1Q96P68 337 aa15.34■□□□□ 0.05
MDC1-206ENST00000489540 ASPNQ9BXN1 380 aa15.34■□□□□ 0.05
MDC1-206ENST00000489540 ASB6Q9NWX5 421 aa15.34■□□□□ 0.05
MDC1-206ENST00000489540 EDARQ9UNE0 448 aa15.34■□□□□ 0.05
MDC1-206ENST00000489540 M0R082 166 aa15.33■□□□□ 0.04
MDC1-206ENST00000489540 IGHV3-9P01782 118 aa15.33■□□□□ 0.04
MDC1-206ENST00000489540 BGLAPP02818 100 aa15.33■□□□□ 0.04
MDC1-206ENST00000489540 THRBP10828 461 aa15.33■□□□□ 0.04
MDC1-206ENST00000489540 ZNF43P17038 809 aa15.33■□□□□ 0.04
MDC1-206ENST00000489540 COX5AP20674 150 aa15.33■□□□□ 0.04
MDC1-206ENST00000489540 IGHV1-2P23083 117 aa15.33■□□□□ 0.04
MDC1-206ENST00000489540 LTBQ06643 244 aa15.33■□□□□ 0.04
MDC1-206ENST00000489540 C22orf34Q6ZV56 151 aa15.33■□□□□ 0.04
MDC1-206ENST00000489540 CBLL1Q75N03 491 aa15.33■□□□□ 0.04
MDC1-206ENST00000489540 SSX8Q7RTT4 187 aa15.33■□□□□ 0.04
MDC1-206ENST00000489540 TSPYL5Q86VY4 417 aaPredicted RBP15.33■□□□□ 0.04
MDC1-206ENST00000489540 CDC20BQ86Y33 519 aa15.33■□□□□ 0.04
MDC1-206ENST00000489540 EPHX4Q8IUS5 362 aa15.33■□□□□ 0.04
MDC1-206ENST00000489540 ZNF417Q8TAU3 575 aa15.33■□□□□ 0.04
MDC1-206ENST00000489540 FAM162AQ96A26 154 aa15.33■□□□□ 0.04
MDC1-206ENST00000489540 ZNF385AQ96PM9 386 aaKnown RBP15.33■□□□□ 0.04
MDC1-206ENST00000489540 ZNF587Q96SQ5 575 aaPredicted RBP15.33■□□□□ 0.04
MDC1-206ENST00000489540 UPB1Q9UBR1 384 aa15.33■□□□□ 0.04
MDC1-206ENST00000489540 MALT1Q9UDY8 824 aa15.33■□□□□ 0.04
MDC1-206ENST00000489540 RIMS3Q9UJD0 308 aa15.33■□□□□ 0.04
MDC1-206ENST00000489540 OR6C65A6NJZ3 312 aa15.32■□□□□ 0.04
MDC1-206ENST00000489540 ZNF682O95780 498 aa15.32■□□□□ 0.04
MDC1-206ENST00000489540 SERPINA1P01009 418 aa15.32■□□□□ 0.04
MDC1-206ENST00000489540 THBDP07204 575 aa15.32■□□□□ 0.04
MDC1-206ENST00000489540 GGT1P19440 569 aa15.32■□□□□ 0.04
MDC1-206ENST00000489540 CBLP22681 906 aa15.32■□□□□ 0.04
MDC1-206ENST00000489540 PIN1Q13526 163 aaPredicted RBP15.32■□□□□ 0.04
MDC1-206ENST00000489540 C1DQ13901 141 aaKnown RBP15.32■□□□□ 0.04
MDC1-206ENST00000489540 TSC22D1Q15714 1073 aa15.32■□□□□ 0.04
MDC1-206ENST00000489540 SAMD4BQ5PRF9 694 aaKnown RBP15.32■□□□□ 0.04
MDC1-206ENST00000489540 GLYATQ6IB77 296 aa15.32■□□□□ 0.04
MDC1-206ENST00000489540 WDR88Q6ZMY6 472 aa15.32■□□□□ 0.04
MDC1-206ENST00000489540 FKBP9P1Q75LS8 142 aa15.32■□□□□ 0.04
MDC1-206ENST00000489540 P2RY8Q86VZ1 359 aa15.32■□□□□ 0.04
MDC1-206ENST00000489540 KDM8Q8N371 416 aa15.32■□□□□ 0.04
MDC1-206ENST00000489540 POMGNT2Q8NAT1 580 aa15.32■□□□□ 0.04
MDC1-206ENST00000489540 NSL1Q96IY1 281 aa15.32■□□□□ 0.04
MDC1-206ENST00000489540 ZNF426Q9BUY5 554 aa15.32■□□□□ 0.04
MDC1-206ENST00000489540 MRPL39Q9NYK5 338 aaKnown RBP15.32■□□□□ 0.04
MDC1-206ENST00000489540 RPS6KA6Q9UK32 745 aa15.32■□□□□ 0.04
MDC1-206ENST00000489540 MPDZO75970 2070 aa15.31■□□□□ 0.04
MDC1-206ENST00000489540 DEFB108AA8MXU0 73 aa15.31■□□□□ 0.04
MDC1-206ENST00000489540 LYZL6O75951 148 aa15.31■□□□□ 0.04
MDC1-206ENST00000489540 NQO1P15559 274 aaKnown RBP15.31■□□□□ 0.04
MDC1-206ENST00000489540 RBM34P42696 430 aaKnown RBP15.31■□□□□ 0.04
MDC1-206ENST00000489540 MXRA7P84157 204 aa15.31■□□□□ 0.04
MDC1-206ENST00000489540 SLC25A3Q00325 362 aa15.31■□□□□ 0.04
MDC1-206ENST00000489540 ST3GAL3Q11203 375 aa15.31■□□□□ 0.04
MDC1-206ENST00000489540 FAPQ12884 760 aa15.31■□□□□ 0.04
MDC1-206ENST00000489540 PMS2P3Q13401 168 aa15.31■□□□□ 0.04
MDC1-206ENST00000489540 SPATS1Q496A3 300 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms