RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 CA10Q9NS85 328 aa10.79□□□□□ -0.68
CPSF3-204ENST00000489403 TMEM45AQ9NWC5 275 aa10.79□□□□□ -0.68
CPSF3-204ENST00000489403 CRNNQ9UBG3 495 aaPredicted RBP10.79□□□□□ -0.68
CPSF3-204ENST00000489403 ZNF443Q9Y2A4 671 aaPredicted RBP10.79□□□□□ -0.68
CPSF3-204ENST00000489403 GPR45Q9Y5Y3 372 aa10.79□□□□□ -0.68
CPSF3-204ENST00000489403 ARPC4-TTLL3A0A0A6YYG9 625 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 LOC100289279A0A1B0GTE1 492 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 TMEM229AB2RXF0 380 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 NR5A2O00482 541 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 RFXANKO14593 260 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 NPIPB7O75200 414 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 UPK3AO75631 287 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 PDE5AO76074 875 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 KRT75O95678 551 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 CECR9P0C854 216 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 PRG2P13727 222 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 APEHP13798 732 aaKnown RBP10.78□□□□□ -0.68
CPSF3-204ENST00000489403 ETFAP13804 333 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 EPHA3P29320 983 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 CALCRP30988 508 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 SERPINF1P36955 418 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 UBE2NP61088 152 aaKnown RBP10.78□□□□□ -0.68
CPSF3-204ENST00000489403 TUBA1BP68363 451 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 TUBA4AP68366 448 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 NAAAQ02083 359 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 BST1Q10588 318 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 MPP2Q14168 576 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 ADIPOQQ15848 244 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 CARTPTQ16568 116 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 RPS26P11Q5JNZ5 115 aaPredicted RBP10.78□□□□□ -0.68
CPSF3-204ENST00000489403 RNF220Q5VTB9 566 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 C1orf140Q5VVS0 124 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 PRAMEF8Q5VWM4 474 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 PRAMEF7Q5VXH5 474 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 WDR93Q6P2C0 686 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 TUBA1AQ71U36 451 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 SLC46A3Q7Z3Q1 461 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 SPATA19Q7Z5L4 167 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 EPHX4Q8IUS5 362 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 CLIP4Q8N3C7 705 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 MREGQ8N565 214 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 BCL2L2Q92843 193 aaPredicted RBP10.78□□□□□ -0.68
CPSF3-204ENST00000489403 C3orf49Q96BT1 292 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 FOXN4Q96NZ1 517 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 KCNS3Q9BQ31 491 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 BPESC1Q9GZL8 116 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 WDR55Q9H6Y2 383 aaPredicted RBP10.78□□□□□ -0.68
CPSF3-204ENST00000489403 MYOZ1Q9NP98 299 aaPredicted RBP10.78□□□□□ -0.68
CPSF3-204ENST00000489403 PRDM4Q9UKN5 801 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 CHST2Q9Y4C5 530 aa10.78□□□□□ -0.68
CPSF3-204ENST00000489403 A0A096LPE4 126 aa10.77□□□□□ -0.69
CPSF3-204ENST00000489403 A0A1W2PPZ6 126 aa10.77□□□□□ -0.69
CPSF3-204ENST00000489403 LOC390937A0A1W2PQ73 354 aa10.77□□□□□ -0.69
CPSF3-204ENST00000489403 OR6C65A6NJZ3 312 aa10.77□□□□□ -0.69
CPSF3-204ENST00000489403 B9A039 149 aa10.77□□□□□ -0.69
CPSF3-204ENST00000489403 VAMP5O95183 116 aa10.77□□□□□ -0.69
CPSF3-204ENST00000489403 IGLV1-44P01699 117 aa10.77□□□□□ -0.69
CPSF3-204ENST00000489403 CRYAAP02489 173 aa10.77□□□□□ -0.69
CPSF3-204ENST00000489403 TFPTP0C1Z6 253 aa10.77□□□□□ -0.69
CPSF3-204ENST00000489403 CRATP43155 626 aa10.77□□□□□ -0.69
CPSF3-204ENST00000489403 PPOXP50336 477 aa10.77□□□□□ -0.69
CPSF3-204ENST00000489403 CRISP3P54108 245 aa10.77□□□□□ -0.69
CPSF3-204ENST00000489403 DSTNP60981 165 aa10.77□□□□□ -0.69
CPSF3-204ENST00000489403 COPZ1P61923 177 aa10.77□□□□□ -0.69
CPSF3-204ENST00000489403 EFNB3Q15768 340 aa10.77□□□□□ -0.69
CPSF3-204ENST00000489403 C3orf36Q3SXR2 165 aa10.77□□□□□ -0.69
CPSF3-204ENST00000489403 GTDC1Q4AE62 458 aa10.77□□□□□ -0.69
CPSF3-204ENST00000489403 TNFAIP8L3Q5GJ75 292 aa10.77□□□□□ -0.69
CPSF3-204ENST00000489403 FAM120AOSQ5T036 256 aa10.77□□□□□ -0.69
CPSF3-204ENST00000489403 ANKRD16Q6P6B7 361 aa10.77□□□□□ -0.69
CPSF3-204ENST00000489403 VHLLQ6RSH7 139 aa10.77□□□□□ -0.69
CPSF3-204ENST00000489403 SERPINA11Q86U17 422 aa10.77□□□□□ -0.69
CPSF3-204ENST00000489403 MYPOPQ86VE0 399 aaPredicted RBP10.77□□□□□ -0.69
CPSF3-204ENST00000489403 GLB1L3Q8NCI6 653 aaPredicted RBP10.77□□□□□ -0.69
CPSF3-204ENST00000489403 MAGEE2Q8TD90 523 aaPredicted RBP10.77□□□□□ -0.69
CPSF3-204ENST00000489403 STK35Q8TDR2 534 aa10.77□□□□□ -0.69
CPSF3-204ENST00000489403 TMEM19Q96HH6 336 aa10.77□□□□□ -0.69
CPSF3-204ENST00000489403 ZBTB18Q99592 522 aa10.77□□□□□ -0.69
CPSF3-204ENST00000489403 SOX7Q9BT81 388 aa10.77□□□□□ -0.69
CPSF3-204ENST00000489403 PTDSS2Q9BVG9 487 aa10.77□□□□□ -0.69
CPSF3-204ENST00000489403 C19orf24Q9BVV8 132 aa10.77□□□□□ -0.69
CPSF3-204ENST00000489403 LINC00470Q9BZP3 86 aa10.77□□□□□ -0.69
CPSF3-204ENST00000489403 PLK3Q9H4B4 646 aa10.77□□□□□ -0.69
CPSF3-204ENST00000489403 CALML5Q9NZT1 146 aa10.77□□□□□ -0.69
CPSF3-204ENST00000489403 RASD1Q9Y272 281 aa10.77□□□□□ -0.69
CPSF3-204ENST00000489403 A0A096LPI6 279 aa10.76□□□□□ -0.69
CPSF3-204ENST00000489403 FTCDNL1E5RQL4 147 aa10.76□□□□□ -0.69
CPSF3-204ENST00000489403 IGKV3-15P01624 115 aa10.76□□□□□ -0.69
CPSF3-204ENST00000489403 IL6P05231 212 aa10.76□□□□□ -0.69
CPSF3-204ENST00000489403 CELA3BP08861 270 aa10.76□□□□□ -0.69
CPSF3-204ENST00000489403 OR4A8P0C604 315 aa10.76□□□□□ -0.69
CPSF3-204ENST00000489403 PNMTP11086 282 aa10.76□□□□□ -0.69
CPSF3-204ENST00000489403 ZNF23P17027 643 aa10.76□□□□□ -0.69
CPSF3-204ENST00000489403 NCF2P19878 526 aaPredicted RBP10.76□□□□□ -0.69
CPSF3-204ENST00000489403 PAX7P23759 505 aa10.76□□□□□ -0.69
CPSF3-204ENST00000489403 ROR2Q01974 943 aaKnown RBP10.76□□□□□ -0.69
CPSF3-204ENST00000489403 LARS2Q15031 903 aaKnown RBP10.76□□□□□ -0.69
CPSF3-204ENST00000489403 IQCCQ4KMZ1 466 aa10.76□□□□□ -0.69
CPSF3-204ENST00000489403 ATG16L1Q676U5 607 aa10.76□□□□□ -0.69
CPSF3-204ENST00000489403 KDM8Q8N371 416 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms