RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 TMEM64Q6YI46 380 aa16.35■□□□□ 0.21
NPHP4-209ENST00000489180 SLC35B4Q969S0 331 aa16.35■□□□□ 0.21
NPHP4-209ENST00000489180 NECTIN4Q96NY8 510 aa16.35■□□□□ 0.21
NPHP4-209ENST00000489180 CMSS1Q9BQ75 279 aaKnown RBP16.35■□□□□ 0.21
NPHP4-209ENST00000489180 CNTNAP3Q9BZ76 1288 aa16.35■□□□□ 0.21
NPHP4-209ENST00000489180 GLIPR2Q9H4G4 154 aa16.35■□□□□ 0.21
NPHP4-209ENST00000489180 GABARAPO95166 117 aa16.35■□□□□ 0.21
NPHP4-209ENST00000489180 NFYAP23511 347 aaPredicted RBP16.35■□□□□ 0.21
NPHP4-209ENST00000489180 NXNL2Q5VZ03 156 aa16.35■□□□□ 0.21
NPHP4-209ENST00000489180 NIPAL3Q6P499 406 aa16.35■□□□□ 0.21
NPHP4-209ENST00000489180 GDF7Q7Z4P5 450 aa16.35■□□□□ 0.21
NPHP4-209ENST00000489180 RNF113BQ8IZP6 322 aaKnown RBP16.35■□□□□ 0.21
NPHP4-209ENST00000489180 SEMA4GQ9NTN9 838 aa16.35■□□□□ 0.21
NPHP4-209ENST00000489180 DOT1LQ8TEK3 1739 aa16.35■□□□□ 0.21
NPHP4-209ENST00000489180 OR2A25A4D2G3 310 aa16.35■□□□□ 0.21
NPHP4-209ENST00000489180 HTR2CP28335 458 aa16.35■□□□□ 0.21
NPHP4-209ENST00000489180 EBPQ15125 230 aaKnown RBP16.35■□□□□ 0.21
NPHP4-209ENST00000489180 CDKN3Q16667 212 aa16.35■□□□□ 0.21
NPHP4-209ENST00000489180 TMEM106AQ96A25 262 aa16.35■□□□□ 0.21
NPHP4-209ENST00000489180 ULBP3Q9BZM4 244 aa16.35■□□□□ 0.21
NPHP4-209ENST00000489180 MED17Q9NVC6 651 aa16.35■□□□□ 0.21
NPHP4-209ENST00000489180 CD207Q9UJ71 328 aa16.35■□□□□ 0.21
NPHP4-209ENST00000489180 ACAD8Q9UKU7 415 aa16.35■□□□□ 0.21
NPHP4-209ENST00000489180 SLC22A23A1A5C7 686 aa16.34■□□□□ 0.21
NPHP4-209ENST00000489180 TCRBP04435 133 aa16.34■□□□□ 0.21
NPHP4-209ENST00000489180 CUTCQ9NTM9 273 aa16.34■□□□□ 0.21
NPHP4-209ENST00000489180 M0QYG6 137 aa16.34■□□□□ 0.21
NPHP4-209ENST00000489180 BET1O15155 118 aa16.34■□□□□ 0.21
NPHP4-209ENST00000489180 MTNR1BP49286 362 aa16.34■□□□□ 0.21
NPHP4-209ENST00000489180 OR6T1Q8NGN1 323 aa16.34■□□□□ 0.21
NPHP4-209ENST00000489180 LRIT1Q9P2V4 623 aa16.34■□□□□ 0.21
NPHP4-209ENST00000489180 SLC16A6O15403 523 aa16.34■□□□□ 0.21
NPHP4-209ENST00000489180 EDN3P14138 238 aa16.34■□□□□ 0.21
NPHP4-209ENST00000489180 TRIM23P36406 574 aa16.34■□□□□ 0.21
NPHP4-209ENST00000489180 PPT1P50897 306 aa16.34■□□□□ 0.21
NPHP4-209ENST00000489180 PFN3P60673 137 aa16.34■□□□□ 0.21
NPHP4-209ENST00000489180 CAMK2DQ13557 499 aa16.34■□□□□ 0.21
NPHP4-209ENST00000489180 CLDN22Q8N7P3 220 aa16.34■□□□□ 0.21
NPHP4-209ENST00000489180 TM7SF3Q9NS93 570 aa16.34■□□□□ 0.21
NPHP4-209ENST00000489180 SIDT1Q9NXL6 827 aaKnown RBP16.34■□□□□ 0.21
NPHP4-209ENST00000489180 CEBPZOSA8MTT3 80 aa16.34■□□□□ 0.21
NPHP4-209ENST00000489180 MSR1P21757 451 aa16.34■□□□□ 0.21
NPHP4-209ENST00000489180 ATP1B3P54709 279 aa16.34■□□□□ 0.21
NPHP4-209ENST00000489180 GPLD1P80108 840 aa16.34■□□□□ 0.21
NPHP4-209ENST00000489180 HNF4GQ14541 408 aa16.34■□□□□ 0.21
NPHP4-209ENST00000489180 RBM45Q8IUH3 476 aaKnown RBP16.34■□□□□ 0.21
NPHP4-209ENST00000489180 LINC00346Q8IVM7 164 aa16.34■□□□□ 0.21
NPHP4-209ENST00000489180 SVBPQ8N300 66 aa16.34■□□□□ 0.21
NPHP4-209ENST00000489180 ST7LQ8TDW4 575 aa16.34■□□□□ 0.21
NPHP4-209ENST00000489180 AMDHD1Q96NU7 426 aa16.34■□□□□ 0.21
NPHP4-209ENST00000489180 ULBP2Q9BZM5 246 aa16.34■□□□□ 0.21
NPHP4-209ENST00000489180 SIAEQ9HAT2 523 aa16.34■□□□□ 0.21
NPHP4-209ENST00000489180 GDE1Q9NZC3 331 aa16.34■□□□□ 0.21
NPHP4-209ENST00000489180 NPAP1Q9NZP6 1156 aa16.34■□□□□ 0.21
NPHP4-209ENST00000489180 OR14J1Q9UGF5 321 aa16.34■□□□□ 0.21
NPHP4-209ENST00000489180 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.33■□□□□ 0.21
NPHP4-209ENST00000489180 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.33■□□□□ 0.21
NPHP4-209ENST00000489180 GPRIN2O60269 458 aa16.33■□□□□ 0.21
NPHP4-209ENST00000489180 RAB38P57729 211 aa16.33■□□□□ 0.21
NPHP4-209ENST00000489180 TMEM201Q5SNT2 666 aa16.33■□□□□ 0.21
NPHP4-209ENST00000489180 SLC41A2Q96JW4 573 aa16.33■□□□□ 0.21
NPHP4-209ENST00000489180 MS4A8Q9BY19 250 aa16.33■□□□□ 0.21
NPHP4-209ENST00000489180 SLC25A31Q9H0C2 315 aa16.33■□□□□ 0.21
NPHP4-209ENST00000489180 ENKD1Q9H0I2 346 aa16.33■□□□□ 0.21
NPHP4-209ENST00000489180 ZMAT3Q9HA38 289 aaKnown RBP16.33■□□□□ 0.21
NPHP4-209ENST00000489180 C4AP0C0L4 1744 aa16.33■□□□□ 0.21
NPHP4-209ENST00000489180 C4BP0C0L5 1744 aa16.33■□□□□ 0.21
NPHP4-209ENST00000489180 A8MXE2 369 aa16.33■□□□□ 0.2
NPHP4-209ENST00000489180 K7EPK0 472 aa16.33■□□□□ 0.2
NPHP4-209ENST00000489180 SGCEO43556 437 aa16.33■□□□□ 0.2
NPHP4-209ENST00000489180 KLKB1P03952 638 aa16.33■□□□□ 0.2
NPHP4-209ENST00000489180 OR2T7P0C7T2 308 aa16.33■□□□□ 0.2
NPHP4-209ENST00000489180 RAB4AP20338 218 aa16.33■□□□□ 0.2
NPHP4-209ENST00000489180 AFF3P51826 1226 aaKnown RBP16.33■□□□□ 0.2
NPHP4-209ENST00000489180 SFRP5Q5T4F7 317 aa16.33■□□□□ 0.2
NPHP4-209ENST00000489180 BPHLQ86WA6 291 aaPredicted RBP16.33■□□□□ 0.2
NPHP4-209ENST00000489180 LACC1Q8IV20 430 aa16.33■□□□□ 0.2
NPHP4-209ENST00000489180 OR6V1Q8N148 313 aa16.33■□□□□ 0.2
NPHP4-209ENST00000489180 FAM71E2Q8N5Q1 922 aa16.33■□□□□ 0.2
NPHP4-209ENST00000489180 OR10K1Q8NGX5 313 aa16.33■□□□□ 0.2
NPHP4-209ENST00000489180 OR2T27Q8NH04 317 aa16.33■□□□□ 0.2
NPHP4-209ENST00000489180 ZNF845Q96IR2 970 aaPredicted RBP16.33■□□□□ 0.2
NPHP4-209ENST00000489180 TCEAL2Q9H3H9 227 aaPredicted RBP16.33■□□□□ 0.2
NPHP4-209ENST00000489180 A4GALTQ9NPC4 353 aa16.33■□□□□ 0.2
NPHP4-209ENST00000489180 MYO18AQ92614 2054 aaKnown RBP16.33■□□□□ 0.2
NPHP4-209ENST00000489180 NME2P22392 152 aa16.33■□□□□ 0.2
NPHP4-209ENST00000489180 HTR4Q13639 388 aa16.33■□□□□ 0.2
NPHP4-209ENST00000489180 SOWAHCQ53LP3 525 aaPredicted RBP16.33■□□□□ 0.2
NPHP4-209ENST00000489180 Q6ZNX1 250 aa16.33■□□□□ 0.2
NPHP4-209ENST00000489180 SMAP2Q8WU79 429 aaPredicted RBP16.33■□□□□ 0.2
NPHP4-209ENST00000489180 KCTD12Q96CX2 325 aaKnown RBP16.33■□□□□ 0.2
NPHP4-209ENST00000489180 GLTPQ9NZD2 209 aa16.33■□□□□ 0.2
NPHP4-209ENST00000489180 LUZP4Q9P127 313 aa16.33■□□□□ 0.2
NPHP4-209ENST00000489180 TMEM212A6NML5 194 aa16.33■□□□□ 0.2
NPHP4-209ENST00000489180 HTR1FP30939 366 aa16.33■□□□□ 0.2
NPHP4-209ENST00000489180 RPS19P39019 145 aaKnown RBP16.33■□□□□ 0.2
NPHP4-209ENST00000489180 TMEM176BQ3YBM2 270 aaPredicted RBP16.33■□□□□ 0.2
NPHP4-209ENST00000489180 KDM4DQ6B0I6 523 aa16.33■□□□□ 0.2
NPHP4-209ENST00000489180 PRSS45Q7RTY3 260 aa16.33■□□□□ 0.2
NPHP4-209ENST00000489180 SPNS2Q8IVW8 549 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms