RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, human

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPA-213	ENST00000488131	BRIX1	Q8TDN6	353 aa	Known RBP	4.37	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	SPRYD4	Q8WW59	207 aa	Predicted RBP	4.37	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	ACOT11	Q8WXI4	607 aa	Predicted RBP	4.37	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	HMCES	Q96FZ2	354 aa		4.37	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	MARS2	Q96GW9	593 aa	Known RBP	4.37	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	CDCA3	Q99618	268 aa	Predicted RBP	4.37	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	SMO	Q99835	787 aa		4.37	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	VRK1	Q99986	396 aa	Predicted RBP	4.37	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	ZNF559	Q9BR84	538 aa		4.37	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	WRAP53	Q9BUR4	548 aa	Known RBP	4.37	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	TRMT61B	Q9BVS5	477 aa	Known RBP	4.37	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	MRPL37	Q9BZE1	423 aa	Known RBP	4.37	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	METTL9	Q9H1A3	318 aa		4.37	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	WDR13	Q9H1Z4	485 aa		4.37	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	SFXN1	Q9H9B4	322 aa		4.37	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	CSNK1G1	Q9HCP0	422 aa		4.37	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	MYOZ2	Q9NPC6	264 aa		4.37	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	NMRK2	Q9NPI5	230 aa		4.37	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	UQCC1	Q9NVA1	299 aa		4.37	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	MED17	Q9NVC6	651 aa		4.37	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	ASF1B	Q9NVP2	202 aa		4.37	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	TMEM248	Q9NWD8	314 aa		4.37	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	TNFSF18	Q9UNG2	199 aa		4.37	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	RUVBL1	Q9Y265	456 aa	Known RBP	4.37	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	CHD5	Q8TDI0	1954 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	THSD7A	Q9UPZ6	1657 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	EVPL	Q92817	2033 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131		A0A1B0GVC2	190 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131		A6NIN4	97 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	OR6C76	A6NM76	312 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	PGRMC2	O15173	223 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	TCAP	O15273	167 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	HBP1	O60381	514 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	CLDN11	O75508	207 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	STK16	O75716	305 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	LY86	O95711	162 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	TRBC1	P01850	177 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	HOXB5	P09067	269 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	C1GALT1C1L	P0DN25	315 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	VSIG10L2	P0DP72	767 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	DPEP1	P16444	411 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	ATF1	P18846	271 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	HOXA5	P20719	270 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	ACHE	P22303	614 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	NFYB	P25208	207 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	SHC1	P29353	583 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	GDF5	P43026	501 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	PCP4	P48539	62 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	LUM	P51884	338 aa	Predicted RBP	4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	DGKE	P52429	567 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	HSD17B7	P56937	341 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	TBX4	P57082	545 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	BPIFB3	P59826	476 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	NUTF2	P61970	127 aa	Known RBP	4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	NFATC2	Q13469	925 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	C2orf68	Q2NKX9	166 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	ZNF791	Q3KP31	576 aa	Predicted RBP	4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	SLC25A35	Q3KQZ1	300 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	MARCH8	Q5T0T0	291 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	CPTP	Q5TA50	214 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	DCAF12L2	Q5VW00	463 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	FRG2	Q64ET8	278 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	SFRP4	Q6FHJ7	346 aa	Predicted RBP	4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	HEPHL1	Q6MZM0	1159 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	TCTN3	Q6NUS6	607 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	LPCAT3	Q6P1A2	487 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	CDC73	Q6P1J9	531 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	C1orf94	Q6P1W5	598 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	TRIM40	Q6P9F5	258 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	ZNF613	Q6PF04	617 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	DRAM2	Q6UX65	266 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	CXXC5	Q7LFL8	322 aa	Known RBP	4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	SLC29A4	Q7RTT9	530 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	CTU1	Q7Z7A3	348 aa	Known RBP	4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	TCEAL8	Q8IYN2	117 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	CARF	Q8N187	725 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	PRR18	Q8N4B5	295 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	CELF5	Q8N6W0	485 aa	Known RBP	4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	LCN9	Q8WX39	176 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	SLAMF9	Q96A28	289 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	SMARCD1	Q96GM5	515 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	ZFP3	Q96NJ6	502 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	KLHL5	Q96PQ7	755 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	FRG2B	Q96QU4	278 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	SEMA3C	Q99985	751 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	GINS4	Q9BRT9	223 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	CHST5	Q9GZS9	411 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	CXCL16	Q9H2A7	254 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	SLC32A1	Q9H598	525 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	DBNDD1	Q9H9R9	158 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	SEC61A2	Q9H9S3	476 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	KCNK12	Q9HB15	430 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	TMEM27	Q9HBJ8	222 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	CHMP1A	Q9HD42	196 aa	Predicted RBP	4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	MRPS30	Q9NP92	439 aa	Known RBP	4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	ZDHHC4	Q9NPG8	344 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	DUSP22	Q9NRW4	184 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	ADARB2	Q9NS39	739 aa	Known RBP	4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	TMEM30A	Q9NV96	361 aa		4.36	□□□□□ -1.71
CDC42BPA-213	ENST00000488131	SPG21	Q9NZD8	308 aa		4.36	□□□□□ -1.71

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