RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 IER3IP1Q9Y5U9 82 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 KCNMB2Q9Y691 235 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 CHCHD2Q9Y6H1 151 aaPredicted RBP6.39□□□□□ -1.39
SF3A3-206ENST00000487062 COMMD3-BMI1R4GMX3 469 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 FRYLO94915 3013 aa6.39□□□□□ -1.39
SF3A3-206ENST00000487062 GPR179Q6PRD1 2367 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 C17orf51A8MQB3 221 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 CDRT15L2A8MXV6 281 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 MCIDASD6RGH6 385 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 LRRN3E7EW58 273 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 ETV2O00321 342 aaPredicted RBP6.38□□□□□ -1.39
SF3A3-206ENST00000487062 NPIPB7O75200 414 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 SNX4O95219 450 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 SLC2A10O95528 541 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 LCKP06239 509 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 CD14P08571 375 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 TSPAN19P0C672 248 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 ADORA3P0DMS8 318 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 F8A1P23610 371 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 GRNP28799 593 aaKnown RBP6.38□□□□□ -1.39
SF3A3-206ENST00000487062 GSTT1P30711 240 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 UQCRC1P31930 480 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 CASRP41180 1078 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 AQP2P41181 271 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 CLK1P49759 484 aaKnown RBP6.38□□□□□ -1.39
SF3A3-206ENST00000487062 NOVA1P51513 510 aaKnown RBP6.38□□□□□ -1.39
SF3A3-206ENST00000487062 CTXN1P60606 82 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 RPS7P62081 194 aaKnown RBP6.38□□□□□ -1.39
SF3A3-206ENST00000487062 POU4F2Q12837 409 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 FOXF1Q12946 379 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 AIMP2Q13155 320 aaKnown RBP6.38□□□□□ -1.39
SF3A3-206ENST00000487062 ITGADQ13349 1161 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 FHL1Q13642 323 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 IL10RAQ13651 578 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 ATP1A4Q13733 1029 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 MED22Q15528 200 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 SGCBQ16585 318 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 TIGD6Q17RP2 521 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 PLPPR5Q32ZL2 321 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 KLHL12Q53G59 568 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 EMC4Q5J8M3 183 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 ACER2Q5QJU3 275 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 LCN1P1Q5VSP4 162 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 ABHD17BQ5VST6 288 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 PRAMEF20Q5VT98 475 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 GPR139Q6DWJ6 353 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 NIPAL3Q6P499 406 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 PLBD1Q6P4A8 553 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 IGF2-ASQ6U949 168 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 MEPCEQ7L2J0 689 aaKnown RBP6.38□□□□□ -1.39
SF3A3-206ENST00000487062 P2RY8Q86VZ1 359 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 ANKRD13BQ86YJ7 626 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 ERI1Q8IV48 349 aaKnown RBP6.38□□□□□ -1.39
SF3A3-206ENST00000487062 SIRT6Q8N6T7 355 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 FADS6Q8N9I5 356 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 SLC37A3Q8NCC5 494 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 ZNF248Q8NDW4 579 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 PSD4Q8NDX1 1056 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 PROKR2Q8NFJ6 384 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 OR52E2Q8NGJ4 325 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 OR9Q1Q8NGQ5 310 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 OR1J4Q8NGS1 313 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 OR5J2Q8NH18 312 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 MFSD8Q8NHS3 518 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 ADAMTS17Q8TE56 1095 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 SLC25A43Q8WUT9 341 aaPredicted RBP6.38□□□□□ -1.39
SF3A3-206ENST00000487062 ADAMTS14Q8WXS8 1223 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 ZBTB8AQ96BR9 441 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 ZNF524Q96C55 264 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 C12orf43Q96C57 262 aaKnown RBP6.38□□□□□ -1.39
SF3A3-206ENST00000487062 SLC25A36Q96CQ1 311 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 LGALS12Q96DT0 336 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 KTI12Q96EK9 354 aaPredicted RBP6.38□□□□□ -1.39
SF3A3-206ENST00000487062 C1GALT1C1Q96EU7 318 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 TMEM41AQ96HV5 264 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 COG8Q96MW5 612 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 MOGAT1Q96PD6 335 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 DOK1Q99704 481 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 KLHDC3Q9BQ90 382 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 KATNB1Q9BVA0 655 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 FUNDC2Q9BWH2 189 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 POTEKPQ9BYX7 375 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 NRIP3Q9NQ35 241 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 SACM1LQ9NTJ5 587 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 TNFRSF10DQ9UBN6 386 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 VDAC3Q9Y277 283 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 EXOGQ9Y2C4 368 aaKnown RBP6.38□□□□□ -1.39
SF3A3-206ENST00000487062 CORINQ9Y5Q5 1042 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 OTOGLQ3ZCN5 2332 aa6.38□□□□□ -1.39
SF3A3-206ENST00000487062 VPS13AQ96RL7 3174 aa6.37□□□□□ -1.39
SF3A3-206ENST00000487062 TMEM129A0AVI4 362 aa6.37□□□□□ -1.39
SF3A3-206ENST00000487062 ZC3H12DA2A288 527 aaKnown RBP6.37□□□□□ -1.39
SF3A3-206ENST00000487062 FAM183AA6NL82 134 aa6.37□□□□□ -1.39
SF3A3-206ENST00000487062 TRIM3O75382 744 aaPredicted RBP6.37□□□□□ -1.39
SF3A3-206ENST00000487062 CBR3O75828 277 aa6.37□□□□□ -1.39
SF3A3-206ENST00000487062 TXNDC12O95881 172 aa6.37□□□□□ -1.39
SF3A3-206ENST00000487062 RENP00797 406 aa6.37□□□□□ -1.39
SF3A3-206ENST00000487062 PTHP01270 115 aa6.37□□□□□ -1.39
SF3A3-206ENST00000487062 CCL3P10147 92 aa6.37□□□□□ -1.39
SF3A3-206ENST00000487062 TFPIP10646 304 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms