RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 HMGCS1Q01581 520 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 FAM27E3Q08E93 113 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 PLCXD2Q0VAA5 305 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 GALNT1Q10472 559 aaPredicted RBP3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 CALCOCO2Q13137 446 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 NAB1Q13506 487 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 GTF2H2Q13888 395 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 FGFBP1Q14512 234 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 PFKFB4Q16877 469 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 FAM83EQ2M2I3 478 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 PRICKLE4Q2TBC4 344 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 KBTBD12Q3ZCT8 623 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 C14orf177Q52M58 125 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 CCNYL2Q5T2Q4 361 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 FRG2Q64ET8 278 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 TYW3Q6IPR3 259 aaKnown RBP3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 ADAM5Q6NVV9 412 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 SLC48A1Q6P1K1 146 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 GTF2H2CQ6P1K8 395 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 CHMP1BQ7LBR1 199 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 PAGE2Q7Z2X7 111 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 GOLGA7Q7Z5G4 137 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 CMC1Q7Z7K0 106 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 KRTAP7-1Q8IUC3 87 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 GRAMD2AQ8IUY3 354 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 CTAGE3PQ8IX95 158 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 CENPLQ8N0S6 344 aaPredicted RBP3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 GCNT2Q8N0V5 402 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 METTL4Q8N3J2 472 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 GBP7Q8N8V2 638 aaPredicted RBP3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 RNF138Q8WVD3 245 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 NXNL1Q96CM4 212 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 TMCO6Q96DC7 493 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 ERP27Q96DN0 273 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 OMA1Q96E52 524 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 PIK3IP1Q96FE7 263 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 PGM2Q96G03 612 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 COL21A1Q96P44 957 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 CCL19Q99731 98 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 SLC39A3Q9BRY0 314 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 NTMT1Q9BV86 223 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 ITPAQ9BY32 194 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 CADM1Q9BY67 442 aaKnown RBP3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 GFRA4Q9GZZ7 299 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 SAYSD1Q9NPB0 183 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 KLHL28Q9NXS3 571 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 TAS2R10Q9NYW0 307 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 MAT2BQ9NZL9 334 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 C6orf203Q9P0P8 240 aaPredicted RBP3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 RNF14Q9UBS8 474 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 PRODH2Q9UF12 536 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 BCAP29Q9UHQ4 241 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 CES1P1Q9UKY3 287 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 PSME2Q9UL46 239 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 RNF11Q9Y3C5 154 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 WIF1Q9Y5W5 379 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 SAR1BQ9Y6B6 198 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 CR1P17927 2039 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 NBEAL1Q6ZS30 2694 aa3.52□□□□□ -1.85
SNRNP40-205ENST00000486941 TRIM64A6NGJ6 449 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 FRG2CA6NGY1 282 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 TRIM64BA6NI03 449 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 SLC22A20A6NK97 555 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 OR7A17O14581 309 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 TSPAN2O60636 221 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 CRLF1O75462 422 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 ERAL1O75616 437 aaKnown RBP3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 SIX3O95343 332 aaPredicted RBP3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 C2P06681 752 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 CT45A8P0DMV1 189 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 CT45A9P0DMV2 189 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 POU2F1P14859 743 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 IL11P20809 199 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 TBXA2RP21731 343 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 CNTFP26441 200 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 LOXP28300 417 aaPredicted RBP3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 STX2P32856 288 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 CPOXP36551 454 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 FEN1P39748 380 aaKnown RBP3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 MAGEA4P43358 317 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 PCP4P48539 62 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 CCNG1P51959 295 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 MAPK12P53778 367 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 PNLIPRP2P54317 469 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 DSCR4P56555 118 aaPredicted RBP3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 CLDN15P56746 228 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 B3GALT5-AS1P59052 145 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 TRA2BP62995 288 aaKnown RBP3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 MRPS22P82650 360 aaKnown RBP3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 CAV1Q03135 178 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 EFR3AQ14156 821 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 SLMAPQ14BN4 828 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 EXOSC7Q15024 291 aaKnown RBP3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 NNATQ16517 81 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 TBRG1Q3YBR2 411 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 GLYR1Q49A26 553 aaPredicted RBP3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 GGTA1PQ4G0N0 100 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 TRMT12Q53H54 448 aaKnown RBP3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 CT45A2Q5DJT8 189 aa3.51□□□□□ -1.85
SNRNP40-205ENST00000486941 TMEM268Q5VZI3 342 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms