RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 D6RAR5 112 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 KLF11O14901 512 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 OGG1O15527 345 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 WBP4O75554 376 aaKnown RBP4.95□□□□□ -1.62
COPS3-209ENST00000486810 NEURL1O76050 574 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 DFFBO76075 338 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 MOCS3O95396 460 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 FGF19O95750 216 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 TOMM40O96008 361 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 GH1P01241 217 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 IGF2P01344 180 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 HOXB5P09067 269 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 ANXA4P09525 319 aaPredicted RBP4.95□□□□□ -1.62
COPS3-209ENST00000486810 CSF1P09603 554 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 HNRNPA1P09651 372 aaKnown RBP eCLIP4.95□□□□□ -1.62
COPS3-209ENST00000486810 SNHG28P0DPA3 235 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 GTF2F2P13984 249 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 HLA-GP17693 338 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 NPR2P20594 1047 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 MYL9P24844 172 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 OTX2P32243 289 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 GGT5P36269 586 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 CXCR3P49682 368 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 PDLIM4P50479 330 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 GABARAPL2P60520 117 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 CCL7P80098 99 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 CHRNB3Q05901 458 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 SCN1BQ07699 218 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 SPP2Q13103 211 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 SLAMF1Q13291 335 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 GTF2H2Q13888 395 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 IRF3Q14653 427 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 NRF1Q16656 503 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 ZNF260Q3ZCT1 412 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 ARL13AQ5H913 290 aaPredicted RBP4.95□□□□□ -1.62
COPS3-209ENST00000486810 SYT6Q5T7P8 510 aaPredicted RBP4.95□□□□□ -1.62
COPS3-209ENST00000486810 TTC23Q5W5X9 447 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 XAF1Q6GPH4 301 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 DGAT2L7PQ6IED9 249 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 ADNP2Q6IQ32 1131 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 GTF2H2CQ6P1K8 395 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 FIGLAQ6QHK4 219 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 UQCC3Q6UW78 93 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 ZNF836Q6ZNA1 936 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 MRPL21Q7Z2W9 205 aaKnown RBP4.95□□□□□ -1.62
COPS3-209ENST00000486810 PIM3Q86V86 326 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 UNC93AQ86WB7 457 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 GPSM1Q86YR5 675 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 RBM45Q8IUH3 476 aaKnown RBP4.95□□□□□ -1.62
COPS3-209ENST00000486810 SNX29P2Q8IUI4 249 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 PGAM4Q8N0Y7 254 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 UXS1Q8NBZ7 420 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 OR7A2PQ8NGA2 310 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 OR10H4Q8NGA5 316 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 OR10W1Q8NGF6 305 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 OR8D4Q8NGM9 314 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 OR14A16Q8NHC5 309 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 WDR36Q8NI36 951 aaKnown RBP4.95□□□□□ -1.62
COPS3-209ENST00000486810 MPLKIPQ8TAP9 179 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 SELENOMQ8WWX9 145 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 LCN9Q8WX39 176 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 ACOT12Q8WYK0 555 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 RNFT2Q96EX2 444 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 ZC3HAV1LQ96H79 300 aaKnown RBP4.95□□□□□ -1.62
COPS3-209ENST00000486810 IGSF21Q96ID5 467 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 C4orf36Q96KX1 117 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 OR5B2Q96R09 309 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 VAT1Q99536 393 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 PHB2Q99623 299 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 FUNDC2Q9BWH2 189 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 CDT1Q9H211 546 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 SLC38A1Q9H2H9 487 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 PTGES2Q9H7Z7 377 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 CHODLQ9H9P2 273 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 LHX9Q9NQ69 397 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 GPR173Q9NS66 373 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 NLE1Q9NVX2 485 aaPredicted RBP4.95□□□□□ -1.62
COPS3-209ENST00000486810 TMEM160Q9NX00 188 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 C1orf109Q9NX04 203 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 DUS2Q9NX74 493 aaKnown RBP4.95□□□□□ -1.62
COPS3-209ENST00000486810 MTMR10Q9NXD2 777 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 LRWD1Q9UFC0 647 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 PHF11Q9UIL8 331 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 GNG8Q9UK08 70 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 MAGI3Q5TCQ9 1506 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 PTPRKQ15262 1439 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 CDC42BPGQ6DT37 1551 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 CACNA1IQ9P0X4 2223 aa4.95□□□□□ -1.62
COPS3-209ENST00000486810 ITSN1Q15811 1721 aa4.94□□□□□ -1.62
COPS3-209ENST00000486810 TRPM3Q9HCF6 1732 aaPredicted RBP4.94□□□□□ -1.62
COPS3-209ENST00000486810 NESP48681 1621 aa4.94□□□□□ -1.62
COPS3-209ENST00000486810 ABCA6Q8N139 1617 aa4.94□□□□□ -1.62
COPS3-209ENST00000486810 TRBV11-1A0A0K0K1C0 115 aa4.94□□□□□ -1.62
COPS3-209ENST00000486810 A0A0U1RQF3 1178 aa4.94□□□□□ -1.62
COPS3-209ENST00000486810 TMEM272A0A1B0GTI8 110 aa4.94□□□□□ -1.62
COPS3-209ENST00000486810 ATP6AP2A0A1C7CYW4 349 aa4.94□□□□□ -1.62
COPS3-209ENST00000486810 A0A1W2PNV4 684 aa4.94□□□□□ -1.62
COPS3-209ENST00000486810 TMEM72A0PK05 275 aa4.94□□□□□ -1.62
COPS3-209ENST00000486810 TMEM218A2RU14 115 aa4.94□□□□□ -1.62
COPS3-209ENST00000486810 NPIPB13A6NJU9 1138 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms