RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 GXYLT1Q4G148 440 aa11.44□□□□□ -0.58
HDAC6-229ENST00000486665 EMC4Q5J8M3 183 aa11.44□□□□□ -0.58
HDAC6-229ENST00000486665 OTUD3Q5T2D3 398 aaPredicted RBP11.44□□□□□ -0.58
HDAC6-229ENST00000486665 FBXW10Q5XX13 1052 aa11.44□□□□□ -0.58
HDAC6-229ENST00000486665 C5orf46Q6UWT4 87 aa11.44□□□□□ -0.58
HDAC6-229ENST00000486665 PLXDC2Q6UX71 529 aa11.44□□□□□ -0.58
HDAC6-229ENST00000486665 GFRALQ6UXV0 394 aa11.44□□□□□ -0.58
HDAC6-229ENST00000486665 ZDHHC13Q8IUH4 622 aa11.44□□□□□ -0.58
HDAC6-229ENST00000486665 SVOPLQ8N434 492 aa11.44□□□□□ -0.58
HDAC6-229ENST00000486665 LINC00471Q8N535 108 aa11.44□□□□□ -0.58
HDAC6-229ENST00000486665 OR6S1Q8NH40 331 aa11.44□□□□□ -0.58
HDAC6-229ENST00000486665 GTPBP3Q969Y2 492 aaKnown RBP11.44□□□□□ -0.58
HDAC6-229ENST00000486665 SLC29A1Q99808 456 aa11.44□□□□□ -0.58
HDAC6-229ENST00000486665 CIB1Q99828 191 aa11.44□□□□□ -0.58
HDAC6-229ENST00000486665 NIPSNAP1Q9BPW8 284 aa11.44□□□□□ -0.58
HDAC6-229ENST00000486665 TUBA1CQ9BQE3 449 aa11.44□□□□□ -0.58
HDAC6-229ENST00000486665 PSD2Q9BQI7 771 aa11.44□□□□□ -0.58
HDAC6-229ENST00000486665 KLHL4Q9C0H6 718 aa11.44□□□□□ -0.58
HDAC6-229ENST00000486665 ALKBH4Q9NXW9 302 aa11.44□□□□□ -0.58
HDAC6-229ENST00000486665 SLC5A6Q9Y289 635 aa11.44□□□□□ -0.58
HDAC6-229ENST00000486665 ZNF407Q9C0G0 2248 aa11.44□□□□□ -0.58
HDAC6-229ENST00000486665 PDZD2O15018 2839 aa11.44□□□□□ -0.58
HDAC6-229ENST00000486665 AKAP9Q99996 3911 aa11.43□□□□□ -0.58
HDAC6-229ENST00000486665 IGHV3-15A0A0B4J1V0 119 aa11.43□□□□□ -0.58
HDAC6-229ENST00000486665 ARRDC5A6NEK1 342 aa11.43□□□□□ -0.58
HDAC6-229ENST00000486665 KDM4EB2RXH2 506 aaPredicted RBP11.43□□□□□ -0.58
HDAC6-229ENST00000486665 SOCS2O14508 198 aa11.43□□□□□ -0.58
HDAC6-229ENST00000486665 OR2T1O43869 369 aa11.43□□□□□ -0.58
HDAC6-229ENST00000486665 FZD7O75084 574 aa11.43□□□□□ -0.58
HDAC6-229ENST00000486665 PTP4A3O75365 173 aa11.43□□□□□ -0.58
HDAC6-229ENST00000486665 AKR7A3O95154 331 aa11.43□□□□□ -0.58
HDAC6-229ENST00000486665 ASAH2BP0C7U1 165 aa11.43□□□□□ -0.58
HDAC6-229ENST00000486665 PRF1P14222 555 aa11.43□□□□□ -0.58
HDAC6-229ENST00000486665 ENPP1P22413 925 aa11.43□□□□□ -0.58
HDAC6-229ENST00000486665 IFNGR2P38484 337 aa11.43□□□□□ -0.58
HDAC6-229ENST00000486665 ARHGDIAP52565 204 aa11.43□□□□□ -0.58
HDAC6-229ENST00000486665 RAC3P60763 192 aa11.43□□□□□ -0.58
HDAC6-229ENST00000486665 SLC35A1P78382 337 aa11.43□□□□□ -0.58
HDAC6-229ENST00000486665 FHL1Q13642 323 aa11.43□□□□□ -0.58
HDAC6-229ENST00000486665 TRIP10Q15642 601 aa11.43□□□□□ -0.58
HDAC6-229ENST00000486665 FAM69AQ5T7M9 428 aa11.43□□□□□ -0.58
HDAC6-229ENST00000486665 WLSQ5T9L3 541 aa11.43□□□□□ -0.58
HDAC6-229ENST00000486665 FAHD1Q6P587 224 aa11.43□□□□□ -0.58
HDAC6-229ENST00000486665 CDK20Q8IZL9 346 aa11.43□□□□□ -0.58
HDAC6-229ENST00000486665 CBR4Q8N4T8 237 aa11.43□□□□□ -0.58
HDAC6-229ENST00000486665 TMEM99Q8N816 258 aa11.43□□□□□ -0.58
HDAC6-229ENST00000486665 OR13C2Q8NGS9 318 aa11.43□□□□□ -0.58
HDAC6-229ENST00000486665 NRG4Q8WWG1 115 aa11.43□□□□□ -0.58
HDAC6-229ENST00000486665 LIPHQ8WWY8 451 aa11.43□□□□□ -0.58
HDAC6-229ENST00000486665 ROBO4Q8WZ75 1007 aa11.43□□□□□ -0.58
HDAC6-229ENST00000486665 TNFRSF13CQ96RJ3 184 aa11.43□□□□□ -0.58
HDAC6-229ENST00000486665 UCN2Q96RP3 112 aa11.43□□□□□ -0.58
HDAC6-229ENST00000486665 TAPBPLQ9BX59 468 aa11.43□□□□□ -0.58
HDAC6-229ENST00000486665 DGCR6LQ9BY27 220 aa11.43□□□□□ -0.58
HDAC6-229ENST00000486665 GABARAPL1Q9H0R8 117 aa11.43□□□□□ -0.58
HDAC6-229ENST00000486665 NANSQ9NR45 359 aa11.43□□□□□ -0.58
HDAC6-229ENST00000486665 MGAT4BQ9UQ53 548 aa11.43□□□□□ -0.58
HDAC6-229ENST00000486665 TMEM5Q9Y2B1 443 aa11.43□□□□□ -0.58
HDAC6-229ENST00000486665 ANKRD17O75179 2603 aaKnown RBP11.42□□□□□ -0.58
HDAC6-229ENST00000486665 HTR3EA5X5Y0 456 aa11.42□□□□□ -0.58
HDAC6-229ENST00000486665 UNC119BA6NIH7 251 aa11.42□□□□□ -0.58
HDAC6-229ENST00000486665 MS4A18H0YCH9 400 aa11.42□□□□□ -0.58
HDAC6-229ENST00000486665 M0R082 166 aa11.42□□□□□ -0.58
HDAC6-229ENST00000486665 BCKDKO14874 412 aa11.42□□□□□ -0.58
HDAC6-229ENST00000486665 CASQ2O14958 399 aaPredicted RBP11.42□□□□□ -0.58
HDAC6-229ENST00000486665 RAMP1O60894 148 aa11.42□□□□□ -0.58
HDAC6-229ENST00000486665 MITFO75030 526 aaPredicted RBP11.42□□□□□ -0.58
HDAC6-229ENST00000486665 MT-ATP6P00846 226 aa11.42□□□□□ -0.58
HDAC6-229ENST00000486665 TPOP07202 933 aa11.42□□□□□ -0.58
HDAC6-229ENST00000486665 IGFBP1P08833 259 aaPredicted RBP11.42□□□□□ -0.58
HDAC6-229ENST00000486665 ANXA8P13928 327 aa11.42□□□□□ -0.58
HDAC6-229ENST00000486665 ZNF26P17031 533 aaPredicted RBP11.42□□□□□ -0.58
HDAC6-229ENST00000486665 FPR3P25089 353 aa11.42□□□□□ -0.58
HDAC6-229ENST00000486665 PEX2P28328 305 aa11.42□□□□□ -0.58
HDAC6-229ENST00000486665 P2RY4P51582 365 aa11.42□□□□□ -0.58
HDAC6-229ENST00000486665 AGFG1P52594 562 aaKnown RBP11.42□□□□□ -0.58
HDAC6-229ENST00000486665 RPS3AP61247 264 aaKnown RBP11.42□□□□□ -0.58
HDAC6-229ENST00000486665 CSNK2A1P68400 391 aaPredicted RBP11.42□□□□□ -0.58
HDAC6-229ENST00000486665 H3F3AP84243 136 aa11.42□□□□□ -0.58
HDAC6-229ENST00000486665 TSPAN31Q12999 210 aa11.42□□□□□ -0.58
HDAC6-229ENST00000486665 SGCBQ16585 318 aa11.42□□□□□ -0.58
HDAC6-229ENST00000486665 LRRC36Q1X8D7 754 aa11.42□□□□□ -0.58
HDAC6-229ENST00000486665 MS4A18Q3C1V0 323 aa11.42□□□□□ -0.58
HDAC6-229ENST00000486665 PDSS1Q5T2R2 415 aa11.42□□□□□ -0.58
HDAC6-229ENST00000486665 OGFRL1Q5TC84 451 aaPredicted RBP11.42□□□□□ -0.58
HDAC6-229ENST00000486665 ZNF585AQ6P3V2 769 aa11.42□□□□□ -0.58
HDAC6-229ENST00000486665 KIF18BQ86Y91 864 aa11.42□□□□□ -0.58
HDAC6-229ENST00000486665 CCDC103Q8IW40 242 aa11.42□□□□□ -0.58
HDAC6-229ENST00000486665 PM20D2Q8IYS1 436 aa11.42□□□□□ -0.58
HDAC6-229ENST00000486665 KDM8Q8N371 416 aa11.42□□□□□ -0.58
HDAC6-229ENST00000486665 ATG16L2Q8NAA4 619 aa11.42□□□□□ -0.58
HDAC6-229ENST00000486665 OR51A7Q8NH64 312 aa11.42□□□□□ -0.58
HDAC6-229ENST00000486665 MOSPD2Q8NHP6 518 aa11.42□□□□□ -0.58
HDAC6-229ENST00000486665 ZNF417Q8TAU3 575 aa11.42□□□□□ -0.58
HDAC6-229ENST00000486665 FAM57AQ8TBR7 257 aa11.42□□□□□ -0.58
HDAC6-229ENST00000486665 ZPLD1Q8TCW7 415 aa11.42□□□□□ -0.58
HDAC6-229ENST00000486665 ZNF587Q96SQ5 575 aaPredicted RBP11.42□□□□□ -0.58
HDAC6-229ENST00000486665 C9orf16Q9BUW7 83 aa11.42□□□□□ -0.58
HDAC6-229ENST00000486665 OSBPL10Q9BXB5 764 aa11.42□□□□□ -0.58
HDAC6-229ENST00000486665 UCK2Q9BZX2 261 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms