RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 LYPD3O95274 346 aa16.1■□□□□ 0.17
COL1A1-207ENST00000486572 THY1P04216 161 aa16.1■□□□□ 0.17
COL1A1-207ENST00000486572 PTNP21246 168 aa16.1■□□□□ 0.17
COL1A1-207ENST00000486572 CRYGSP22914 178 aa16.1■□□□□ 0.17
COL1A1-207ENST00000486572 IL32P24001 234 aa16.1■□□□□ 0.17
COL1A1-207ENST00000486572 NTF4P34130 210 aa16.1■□□□□ 0.17
COL1A1-207ENST00000486572 SELENOWP63302 87 aa16.1■□□□□ 0.17
COL1A1-207ENST00000486572 ITGADQ13349 1161 aa16.1■□□□□ 0.17
COL1A1-207ENST00000486572 MFSD13AQ14CX5 517 aa16.1■□□□□ 0.17
COL1A1-207ENST00000486572 FBXW9Q5XUX1 488 aa16.1■□□□□ 0.17
COL1A1-207ENST00000486572 LINC00114Q6XXX2 140 aa16.1■□□□□ 0.17
COL1A1-207ENST00000486572 DEF8Q6ZN54 512 aa16.1■□□□□ 0.17
COL1A1-207ENST00000486572 UBE2J2Q8N2K1 259 aa16.1■□□□□ 0.17
COL1A1-207ENST00000486572 CCDC197Q8NCU1 140 aa16.1■□□□□ 0.17
COL1A1-207ENST00000486572 ZC3HAV1LQ96H79 300 aaKnown RBP16.1■□□□□ 0.17
COL1A1-207ENST00000486572 MPP4Q96JB8 637 aa16.1■□□□□ 0.17
COL1A1-207ENST00000486572 POLR2J2Q9GZM3 115 aaKnown RBP16.1■□□□□ 0.17
COL1A1-207ENST00000486572 POLR2J3Q9H1A7 115 aaKnown RBP16.1■□□□□ 0.17
COL1A1-207ENST00000486572 ADA2Q9NZK5 511 aa16.1■□□□□ 0.17
COL1A1-207ENST00000486572 ADAM21Q9UKJ8 722 aa16.1■□□□□ 0.17
COL1A1-207ENST00000486572 POLQO75417 2590 aa16.1■□□□□ 0.17
COL1A1-207ENST00000486572 M0R082 166 aa16.09■□□□□ 0.17
COL1A1-207ENST00000486572 IGHV3-9P01782 118 aa16.09■□□□□ 0.17
COL1A1-207ENST00000486572 HRGP04196 525 aa16.09■□□□□ 0.17
COL1A1-207ENST00000486572 COX5AP20674 150 aa16.09■□□□□ 0.17
COL1A1-207ENST00000486572 GRPRP30550 384 aa16.09■□□□□ 0.17
COL1A1-207ENST00000486572 OR1E2P47887 323 aa16.09■□□□□ 0.17
COL1A1-207ENST00000486572 TAS2R41P59536 307 aa16.09■□□□□ 0.17
COL1A1-207ENST00000486572 POU4F3Q15319 338 aa16.09■□□□□ 0.17
COL1A1-207ENST00000486572 TSC22D1Q15714 1073 aa16.09■□□□□ 0.17
COL1A1-207ENST00000486572 WDR88Q6ZMY6 472 aa16.09■□□□□ 0.17
COL1A1-207ENST00000486572 C22orf34Q6ZV56 151 aa16.09■□□□□ 0.17
COL1A1-207ENST00000486572 PGAM4Q8N0Y7 254 aa16.09■□□□□ 0.17
COL1A1-207ENST00000486572 ZIC4Q8N9L1 334 aa16.09■□□□□ 0.17
COL1A1-207ENST00000486572 ZNF417Q8TAU3 575 aa16.09■□□□□ 0.17
COL1A1-207ENST00000486572 S100PBPQ96BU1 408 aa16.09■□□□□ 0.17
COL1A1-207ENST00000486572 SLC41A3Q96GZ6 507 aa16.09■□□□□ 0.17
COL1A1-207ENST00000486572 ZNF385AQ96PM9 386 aaKnown RBP16.09■□□□□ 0.17
COL1A1-207ENST00000486572 ZNF587Q96SQ5 575 aaPredicted RBP16.09■□□□□ 0.17
COL1A1-207ENST00000486572 SEC14L4Q9UDX3 406 aa16.09■□□□□ 0.17
COL1A1-207ENST00000486572 MALT1Q9UDY8 824 aa16.09■□□□□ 0.17
COL1A1-207ENST00000486572 B3GALT5Q9Y2C3 310 aa16.09■□□□□ 0.17
COL1A1-207ENST00000486572 CORINQ9Y5Q5 1042 aa16.09■□□□□ 0.17
COL1A1-207ENST00000486572 FREM1Q5H8C1 2179 aa16.09■□□□□ 0.17
COL1A1-207ENST00000486572 LYZL6O75951 148 aa16.08■□□□□ 0.16
COL1A1-207ENST00000486572 OR5F1O95221 314 aa16.08■□□□□ 0.16
COL1A1-207ENST00000486572 ZNF682O95780 498 aa16.08■□□□□ 0.16
COL1A1-207ENST00000486572 BGLAPP02818 100 aa16.08■□□□□ 0.16
COL1A1-207ENST00000486572 THBDP07204 575 aa16.08■□□□□ 0.16
COL1A1-207ENST00000486572 GGT1P19440 569 aa16.08■□□□□ 0.16
COL1A1-207ENST00000486572 CBLP22681 906 aa16.08■□□□□ 0.16
COL1A1-207ENST00000486572 IGHV1-2P23083 117 aa16.08■□□□□ 0.16
COL1A1-207ENST00000486572 KRT72Q14CN4 511 aa16.08■□□□□ 0.16
COL1A1-207ENST00000486572 TTC33Q6PID6 262 aaPredicted RBP16.08■□□□□ 0.16
COL1A1-207ENST00000486572 CREB3L2Q70SY1 520 aa16.08■□□□□ 0.16
COL1A1-207ENST00000486572 H1FNTQ75WM6 255 aaPredicted RBP16.08■□□□□ 0.16
COL1A1-207ENST00000486572 BHLHA15Q7RTS1 189 aaPredicted RBP16.08■□□□□ 0.16
COL1A1-207ENST00000486572 AAED1Q7RTV5 226 aa16.08■□□□□ 0.16
COL1A1-207ENST00000486572 CDH24Q86UP0 819 aa16.08■□□□□ 0.16
COL1A1-207ENST00000486572 CDC20BQ86Y33 519 aa16.08■□□□□ 0.16
COL1A1-207ENST00000486572 FITM2Q8N6M3 262 aa16.08■□□□□ 0.16
COL1A1-207ENST00000486572 C10orf53Q8N6V4 93 aa16.08■□□□□ 0.16
COL1A1-207ENST00000486572 ADPRHL1Q8NDY3 354 aa16.08■□□□□ 0.16
COL1A1-207ENST00000486572 FAM162AQ96A26 154 aa16.08■□□□□ 0.16
COL1A1-207ENST00000486572 USB1Q9BQ65 265 aaKnown RBP16.08■□□□□ 0.16
COL1A1-207ENST00000486572 ZNF426Q9BUY5 554 aa16.08■□□□□ 0.16
COL1A1-207ENST00000486572 ASPNQ9BXN1 380 aa16.08■□□□□ 0.16
COL1A1-207ENST00000486572 SLC19A3Q9BZV2 496 aa16.08■□□□□ 0.16
COL1A1-207ENST00000486572 ASB6Q9NWX5 421 aa16.08■□□□□ 0.16
COL1A1-207ENST00000486572 NDE1Q9NXR1 346 aa16.08■□□□□ 0.16
COL1A1-207ENST00000486572 PDZD2O15018 2839 aa16.08■□□□□ 0.16
COL1A1-207ENST00000486572 DEFB108AA8MXU0 73 aa16.07■□□□□ 0.16
COL1A1-207ENST00000486572 MT-ATP6P00846 226 aa16.07■□□□□ 0.16
COL1A1-207ENST00000486572 SERPINA1P01009 418 aa16.07■□□□□ 0.16
COL1A1-207ENST00000486572 NQO1P15559 274 aaKnown RBP16.07■□□□□ 0.16
COL1A1-207ENST00000486572 NCK1P16333 377 aa16.07■□□□□ 0.16
COL1A1-207ENST00000486572 MNAT1P51948 309 aa16.07■□□□□ 0.16
COL1A1-207ENST00000486572 MXRA7P84157 204 aa16.07■□□□□ 0.16
COL1A1-207ENST00000486572 CBLL1Q75N03 491 aa16.07■□□□□ 0.16
COL1A1-207ENST00000486572 VTCN1Q7Z7D3 282 aa16.07■□□□□ 0.16
COL1A1-207ENST00000486572 EPHX4Q8IUS5 362 aa16.07■□□□□ 0.16
COL1A1-207ENST00000486572 RNF148Q8N7C7 305 aa16.07■□□□□ 0.16
COL1A1-207ENST00000486572 SCAIQ8N9R8 606 aa16.07■□□□□ 0.16
COL1A1-207ENST00000486572 OXGR1Q96P68 337 aa16.07■□□□□ 0.16
COL1A1-207ENST00000486572 MOGAT1Q96PD6 335 aa16.07■□□□□ 0.16
COL1A1-207ENST00000486572 PRSS27Q9BQR3 290 aa16.07■□□□□ 0.16
COL1A1-207ENST00000486572 B3GAT1Q9P2W7 334 aa16.07■□□□□ 0.16
COL1A1-207ENST00000486572 HRNRQ86YZ3 2850 aaPredicted RBP16.07■□□□□ 0.16
COL1A1-207ENST00000486572 ANKRD17O75179 2603 aaKnown RBP16.06■□□□□ 0.16
COL1A1-207ENST00000486572 SIAH2O43255 324 aa16.06■□□□□ 0.16
COL1A1-207ENST00000486572 THRBP10828 461 aa16.06■□□□□ 0.16
COL1A1-207ENST00000486572 ZNF43P17038 809 aa16.06■□□□□ 0.16
COL1A1-207ENST00000486572 SLC25A3Q00325 362 aa16.06■□□□□ 0.16
COL1A1-207ENST00000486572 LTBQ06643 244 aa16.06■□□□□ 0.16
COL1A1-207ENST00000486572 FAPQ12884 760 aa16.06■□□□□ 0.16
COL1A1-207ENST00000486572 PIN1Q13526 163 aaPredicted RBP16.06■□□□□ 0.16
COL1A1-207ENST00000486572 IFI44LQ53G44 452 aa16.06■□□□□ 0.16
COL1A1-207ENST00000486572 TSPO2Q5TGU0 170 aa16.06■□□□□ 0.16
COL1A1-207ENST00000486572 C16orf89Q6UX73 402 aa16.06■□□□□ 0.16
COL1A1-207ENST00000486572 WFDC8Q8IUA0 241 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms