RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 ASPNQ9BXN1 380 aa10.53□□□□□ -0.72
HPS4-214ENST00000485842 GP6Q9HCN6 339 aa10.53□□□□□ -0.72
HPS4-214ENST00000485842 FAM32AQ9Y421 112 aaKnown RBP10.53□□□□□ -0.72
HPS4-214ENST00000485842 ENPP4Q9Y6X5 453 aa10.53□□□□□ -0.72
HPS4-214ENST00000485842 IGKV3D-15A0A087WSY6 115 aa10.52□□□□□ -0.73
HPS4-214ENST00000485842 ENO4A6NNW6 628 aa10.52□□□□□ -0.73
HPS4-214ENST00000485842 ZNF724A8MTY0 619 aa10.52□□□□□ -0.73
HPS4-214ENST00000485842 A8MXE2 369 aa10.52□□□□□ -0.73
HPS4-214ENST00000485842 GPR171O14626 319 aa10.52□□□□□ -0.73
HPS4-214ENST00000485842 FFAR1O14842 300 aa10.52□□□□□ -0.73
HPS4-214ENST00000485842 DNAJC8O75937 253 aaPredicted RBP10.52□□□□□ -0.73
HPS4-214ENST00000485842 DIRAS1O95057 198 aa10.52□□□□□ -0.73
HPS4-214ENST00000485842 CH25HO95992 272 aa10.52□□□□□ -0.73
HPS4-214ENST00000485842 THRBP10828 461 aa10.52□□□□□ -0.73
HPS4-214ENST00000485842 UMPSP11172 480 aa10.52□□□□□ -0.73
HPS4-214ENST00000485842 NQO1P15559 274 aaKnown RBP10.52□□□□□ -0.73
HPS4-214ENST00000485842 FUT4P22083 530 aa10.52□□□□□ -0.73
HPS4-214ENST00000485842 P2RY4P51582 365 aa10.52□□□□□ -0.73
HPS4-214ENST00000485842 SLC16A1P53985 500 aa10.52□□□□□ -0.73
HPS4-214ENST00000485842 VLDLRP98155 873 aa10.52□□□□□ -0.73
HPS4-214ENST00000485842 MS4A2Q01362 244 aa10.52□□□□□ -0.73
HPS4-214ENST00000485842 LTBQ06643 244 aa10.52□□□□□ -0.73
HPS4-214ENST00000485842 TRIM25Q14258 630 aaKnown RBP10.52□□□□□ -0.73
HPS4-214ENST00000485842 SLC17A1Q14916 467 aa10.52□□□□□ -0.73
HPS4-214ENST00000485842 MFSD13AQ14CX5 517 aa10.52□□□□□ -0.73
HPS4-214ENST00000485842 TRAM2Q15035 370 aa10.52□□□□□ -0.73
HPS4-214ENST00000485842 PDK3Q15120 406 aa10.52□□□□□ -0.73
HPS4-214ENST00000485842 LCN8Q6JVE9 175 aa10.52□□□□□ -0.73
HPS4-214ENST00000485842 ZNF474Q6S9Z5 364 aaPredicted RBP10.52□□□□□ -0.73
HPS4-214ENST00000485842 CASP12Q6UXS9 341 aa10.52□□□□□ -0.73
HPS4-214ENST00000485842 TFAP2EQ6VUC0 442 aa10.52□□□□□ -0.73
HPS4-214ENST00000485842 TSEN54Q7Z6J9 526 aaKnown RBP10.52□□□□□ -0.73
HPS4-214ENST00000485842 ZNF100Q8IYN0 542 aa10.52□□□□□ -0.73
HPS4-214ENST00000485842 KDM8Q8N371 416 aa10.52□□□□□ -0.73
HPS4-214ENST00000485842 OR9K2Q8NGE7 335 aa10.52□□□□□ -0.73
HPS4-214ENST00000485842 OR6S1Q8NH40 331 aa10.52□□□□□ -0.73
HPS4-214ENST00000485842 TMEM239Q8WW34 195 aa10.52□□□□□ -0.73
HPS4-214ENST00000485842 MCUR1Q96AQ8 359 aa10.52□□□□□ -0.73
HPS4-214ENST00000485842 LRGUKQ96M69 825 aa10.52□□□□□ -0.73
HPS4-214ENST00000485842 SEPHS2Q99611 448 aa10.52□□□□□ -0.73
HPS4-214ENST00000485842 ZNF426Q9BUY5 554 aa10.52□□□□□ -0.73
HPS4-214ENST00000485842 FOXD3Q9UJU5 478 aaPredicted RBP10.52□□□□□ -0.73
HPS4-214ENST00000485842 NOSIPQ9Y314 301 aaKnown RBP10.52□□□□□ -0.73
HPS4-214ENST00000485842 FLVCR1Q9Y5Y0 555 aa10.52□□□□□ -0.73
HPS4-214ENST00000485842 MT-ATP6P00846 226 aa10.51□□□□□ -0.73
HPS4-214ENST00000485842 SEMG1P04279 462 aa10.51□□□□□ -0.73
HPS4-214ENST00000485842 FABP3P05413 133 aa10.51□□□□□ -0.73
HPS4-214ENST00000485842 POU2F1P14859 743 aa10.51□□□□□ -0.73
HPS4-214ENST00000485842 EDNRAP25101 427 aa10.51□□□□□ -0.73
HPS4-214ENST00000485842 CD79BP40259 229 aa10.51□□□□□ -0.73
HPS4-214ENST00000485842 RBM34P42696 430 aaKnown RBP10.51□□□□□ -0.73
HPS4-214ENST00000485842 OR3A2P47893 321 aa10.51□□□□□ -0.73
HPS4-214ENST00000485842 RASSF2P50749 326 aa10.51□□□□□ -0.73
HPS4-214ENST00000485842 PMS2P3Q13401 168 aa10.51□□□□□ -0.73
HPS4-214ENST00000485842 C1DQ13901 141 aaKnown RBP10.51□□□□□ -0.73
HPS4-214ENST00000485842 ZNF74Q16587 644 aa10.51□□□□□ -0.73
HPS4-214ENST00000485842 MTX3Q5HYI7 312 aa10.51□□□□□ -0.73
HPS4-214ENST00000485842 FGD3Q5JSP0 725 aa10.51□□□□□ -0.73
HPS4-214ENST00000485842 H1FNTQ75WM6 255 aaPredicted RBP10.51□□□□□ -0.73
HPS4-214ENST00000485842 KIF18BQ86Y91 864 aa10.51□□□□□ -0.73
HPS4-214ENST00000485842 ASB9Q96DX5 294 aa10.51□□□□□ -0.73
HPS4-214ENST00000485842 C7orf34Q96L11 122 aa10.51□□□□□ -0.73
HPS4-214ENST00000485842 HS6ST2Q96MM7 605 aa10.51□□□□□ -0.73
HPS4-214ENST00000485842 SLC19A3Q9BZV2 496 aa10.51□□□□□ -0.73
HPS4-214ENST00000485842 KLHL4Q9C0H6 718 aa10.51□□□□□ -0.73
HPS4-214ENST00000485842 ENKD1Q9H0I2 346 aa10.51□□□□□ -0.73
HPS4-214ENST00000485842 MEPEQ9NQ76 525 aaPredicted RBP10.51□□□□□ -0.73
HPS4-214ENST00000485842 PLSCR4Q9NRQ2 329 aa10.51□□□□□ -0.73
HPS4-214ENST00000485842 MAN2C1Q9NTJ4 1040 aa10.51□□□□□ -0.73
HPS4-214ENST00000485842 NDUFAF4Q9P032 175 aa10.51□□□□□ -0.73
HPS4-214ENST00000485842 PRSS50Q9UI38 385 aa10.51□□□□□ -0.73
HPS4-214ENST00000485842 RASD1Q9Y272 281 aa10.51□□□□□ -0.73
HPS4-214ENST00000485842 MED31Q9Y3C7 131 aa10.51□□□□□ -0.73
HPS4-214ENST00000485842 CORINQ9Y5Q5 1042 aa10.51□□□□□ -0.73
HPS4-214ENST00000485842 FREM1Q5H8C1 2179 aa10.5□□□□□ -0.73
HPS4-214ENST00000485842 TCRBV5S2A0A599 114 aa10.5□□□□□ -0.73
HPS4-214ENST00000485842 FZD7O75084 574 aa10.5□□□□□ -0.73
HPS4-214ENST00000485842 MRPL33O75394 65 aaKnown RBP10.5□□□□□ -0.73
HPS4-214ENST00000485842 SERPINI2O75830 405 aa10.5□□□□□ -0.73
HPS4-214ENST00000485842 ATP5HO75947 161 aa10.5□□□□□ -0.73
HPS4-214ENST00000485842 PRSS23O95084 383 aa10.5□□□□□ -0.73
HPS4-214ENST00000485842 VAMP5O95183 116 aa10.5□□□□□ -0.73
HPS4-214ENST00000485842 IGHV3-9P01782 118 aa10.5□□□□□ -0.73
HPS4-214ENST00000485842 MT-ND1P03886 318 aa10.5□□□□□ -0.73
HPS4-214ENST00000485842 H1F0P07305 194 aaKnown RBP10.5□□□□□ -0.73
HPS4-214ENST00000485842 IFI30P13284 250 aa10.5□□□□□ -0.73
HPS4-214ENST00000485842 ITGA2P17301 1181 aa10.5□□□□□ -0.73
HPS4-214ENST00000485842 IGFBP2P18065 325 aa10.5□□□□□ -0.73
HPS4-214ENST00000485842 RHCEP18577 417 aa10.5□□□□□ -0.73
HPS4-214ENST00000485842 SPIBQ01892 262 aa10.5□□□□□ -0.73
HPS4-214ENST00000485842 FAM27E3Q08E93 113 aa10.5□□□□□ -0.73
HPS4-214ENST00000485842 ZNF730Q6ZMV8 503 aa10.5□□□□□ -0.73
HPS4-214ENST00000485842 BEND4Q6ZU67 534 aa10.5□□□□□ -0.73
HPS4-214ENST00000485842 CCDC121Q6ZUS5 278 aa10.5□□□□□ -0.73
HPS4-214ENST00000485842 AAED1Q7RTV5 226 aa10.5□□□□□ -0.73
HPS4-214ENST00000485842 SLC46A3Q7Z3Q1 461 aa10.5□□□□□ -0.73
HPS4-214ENST00000485842 NANOGNBQ7Z5D8 188 aa10.5□□□□□ -0.73
HPS4-214ENST00000485842 ZDHHC21Q8IVQ6 265 aa10.5□□□□□ -0.73
HPS4-214ENST00000485842 DMRTC2Q8IXT2 367 aaPredicted RBP10.5□□□□□ -0.73
HPS4-214ENST00000485842 UBE2J2Q8N2K1 259 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms