RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 SUCLG1P53597 346 aaKnown RBP13.06□□□□□ -0.32
LRIF1-202ENST00000485275 RAC1P63000 192 aa13.06□□□□□ -0.32
LRIF1-202ENST00000485275 EFNB1P98172 346 aa13.06□□□□□ -0.32
LRIF1-202ENST00000485275 IL18R1Q13478 541 aa13.06□□□□□ -0.32
LRIF1-202ENST00000485275 MAD2L1BPQ15013 274 aaPredicted RBP13.06□□□□□ -0.32
LRIF1-202ENST00000485275 PGGHGQ32M88 737 aa13.06□□□□□ -0.32
LRIF1-202ENST00000485275 SLC27A4Q6P1M0 643 aa13.06□□□□□ -0.32
LRIF1-202ENST00000485275 C5orf46Q6UWT4 87 aa13.06□□□□□ -0.32
LRIF1-202ENST00000485275 C8orf59Q8N0T1 100 aaPredicted RBP13.06□□□□□ -0.32
LRIF1-202ENST00000485275 FAM109AQ8N4B1 249 aa13.06□□□□□ -0.32
LRIF1-202ENST00000485275 MFSD8Q8NHS3 518 aa13.06□□□□□ -0.32
LRIF1-202ENST00000485275 SLC25A43Q8WUT9 341 aaPredicted RBP13.06□□□□□ -0.32
LRIF1-202ENST00000485275 TM9SF4Q92544 642 aa13.06□□□□□ -0.32
LRIF1-202ENST00000485275 OSTF1Q92882 214 aa13.06□□□□□ -0.32
LRIF1-202ENST00000485275 ADGRG7Q96K78 797 aa13.06□□□□□ -0.32
LRIF1-202ENST00000485275 TSPAN10Q9H1Z9 355 aaPredicted RBP13.06□□□□□ -0.32
LRIF1-202ENST00000485275 LUZP4Q9P127 313 aa13.06□□□□□ -0.32
LRIF1-202ENST00000485275 TNFRSF10DQ9UBN6 386 aa13.06□□□□□ -0.32
LRIF1-202ENST00000485275 HTR3EA5X5Y0 456 aa13.05□□□□□ -0.32
LRIF1-202ENST00000485275 RAMP1O60894 148 aa13.05□□□□□ -0.32
LRIF1-202ENST00000485275 DIO1P49895 249 aa13.05□□□□□ -0.32
LRIF1-202ENST00000485275 IL5RAQ01344 420 aa13.05□□□□□ -0.32
LRIF1-202ENST00000485275 SGCBQ16585 318 aa13.05□□□□□ -0.32
LRIF1-202ENST00000485275 SMN1Q16637 294 aaKnown RBP13.05□□□□□ -0.32
LRIF1-202ENST00000485275 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.05□□□□□ -0.325e-11■□□□□ 8.1
LRIF1-202ENST00000485275 NANOGNBQ7Z5D8 188 aa13.05□□□□□ -0.32
LRIF1-202ENST00000485275 BCDIN3DQ7Z5W3 292 aaKnown RBP13.05□□□□□ -0.32
LRIF1-202ENST00000485275 SLC22A16Q86VW1 577 aa13.05□□□□□ -0.32
LRIF1-202ENST00000485275 OR5J2Q8NH18 312 aa13.05□□□□□ -0.32
LRIF1-202ENST00000485275 OR6S1Q8NH40 331 aa13.05□□□□□ -0.32
LRIF1-202ENST00000485275 MIB2Q96AX9 1013 aa13.05□□□□□ -0.32
LRIF1-202ENST00000485275 SRXN1Q9BYN0 137 aa13.05□□□□□ -0.32
LRIF1-202ENST00000485275 SPIN1Q9Y657 262 aaPredicted RBP13.05□□□□□ -0.32
LRIF1-202ENST00000485275 DNAJC13O75165 2243 aa13.05□□□□□ -0.32
LRIF1-202ENST00000485275 TNFSF11O14788 317 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 OR2T1O43869 369 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 AKR7A3O95154 331 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 NDUFB2O95178 105 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 RCBTB2O95199 551 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 F13BP05160 661 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 HLA-DOBP13765 273 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 LHX2P50458 406 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 SMSP52788 366 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 ZNF362Q5T0B9 420 aaPredicted RBP13.04□□□□□ -0.32
LRIF1-202ENST00000485275 MAMDC2Q7Z304 686 aaPredicted RBP13.04□□□□□ -0.32
LRIF1-202ENST00000485275 FAM122BQ7Z309 247 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 THAP5Q7Z6K1 395 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 WDFY1Q8IWB7 410 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 KDM8Q8N371 416 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 LNX2Q8N448 690 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 OR2T33Q8NG76 320 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 KLHL15Q96M94 604 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 GPX7Q96SL4 187 aaPredicted RBP13.04□□□□□ -0.32
LRIF1-202ENST00000485275 RHNO1Q9BSD3 238 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 DEFB127Q9H1M4 99 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 ALKBH4Q9NXW9 302 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 MRPL39Q9NYK5 338 aaKnown RBP13.04□□□□□ -0.32
LRIF1-202ENST00000485275 TVP23BQ9NYZ1 205 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 SPRR3Q9UBC9 169 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 GPR52Q9Y2T5 361 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 NBEAQ8NFP9 2946 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 MS4A18H0YCH9 400 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 PLPP3O14495 311 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 IMPA2O14732 288 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 SURF4O15260 269 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 SEC14L5O43304 696 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 ZNF24P17028 368 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 CLDN18P56856 261 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 NUP107P57740 925 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 CDK5R2Q13319 367 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 MS4A18Q3C1V0 323 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 PLEKHN1Q494U1 663 aaPredicted RBP13.04□□□□□ -0.32
LRIF1-202ENST00000485275 NADK2Q4G0N4 442 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 ALG10Q5BKT4 473 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 SLC35F1Q5T1Q4 408 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 KRT80Q6KB66 452 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 RPL13AP3Q6NVV1 102 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 TMPPEQ6ZT21 453 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 UBQLNLQ8IYU4 475 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 TMEM99Q8N816 258 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 KDF1Q8NAX2 398 aaPredicted RBP13.04□□□□□ -0.32
LRIF1-202ENST00000485275 OR52L1Q8NGH7 329 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 RHOXF1Q8NHV9 184 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 IL4I1Q96RQ9 567 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 APOL4Q9BPW4 351 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 KATNB1Q9BVA0 655 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 IFT27Q9BW83 186 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 ACKR4Q9NPB9 350 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 NRIP3Q9NQ35 241 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 ZNF71Q9NQZ8 489 aaPredicted RBP13.04□□□□□ -0.32
LRIF1-202ENST00000485275 QPCTLQ9NXS2 382 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 B3GAT1Q9P2W7 334 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 HDGFL3Q9Y3E1 203 aa13.04□□□□□ -0.32
LRIF1-202ENST00000485275 EIF4E1BA6NMX2 242 aaKnown RBP13.03□□□□□ -0.32
LRIF1-202ENST00000485275 C11orf98E9PRG8 122 aa13.03□□□□□ -0.32
LRIF1-202ENST00000485275 ACOT7O00154 380 aa13.03□□□□□ -0.32
LRIF1-202ENST00000485275 ZNHIT1O43257 154 aa13.03□□□□□ -0.32
LRIF1-202ENST00000485275 RPSAP08865 295 aaKnown RBP13.03□□□□□ -0.32
LRIF1-202ENST00000485275 BMP7P18075 431 aa13.03□□□□□ -0.32
LRIF1-202ENST00000485275 POU3F2P20265 443 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms