RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 AGFG1P52594 562 aaKnown RBP9.14□□□□□ -0.95
USP39-215ENST00000481409 SNRPGP62308 76 aaKnown RBP9.14□□□□□ -0.95
USP39-215ENST00000481409 LSM11P83369 360 aaKnown RBP eCLIP9.14□□□□□ -0.95
USP39-215ENST00000481409 PUDPQ08623 228 aa9.14□□□□□ -0.95
USP39-215ENST00000481409 PMS2P3Q13401 168 aa9.14□□□□□ -0.95
USP39-215ENST00000481409 TOP3AQ13472 1001 aaPredicted RBP9.14□□□□□ -0.95
USP39-215ENST00000481409 FHL1Q13642 323 aa9.14□□□□□ -0.95
USP39-215ENST00000481409 GINS1Q14691 196 aa9.14□□□□□ -0.95
USP39-215ENST00000481409 POU4F3Q15319 338 aa9.14□□□□□ -0.95
USP39-215ENST00000481409 KRTCAP3Q53RY4 240 aa9.14□□□□□ -0.95
USP39-215ENST00000481409 ALG10Q5BKT4 473 aa9.14□□□□□ -0.95
USP39-215ENST00000481409 WIPI1Q5MNZ9 446 aaPredicted RBP9.14□□□□□ -0.95
USP39-215ENST00000481409 MEDAGQ5VYS4 303 aa9.14□□□□□ -0.95
USP39-215ENST00000481409 SLC6A19Q695T7 634 aa9.14□□□□□ -0.95
USP39-215ENST00000481409 ANKRD34AQ69YU3 496 aa9.14□□□□□ -0.95
USP39-215ENST00000481409 VASNQ6EMK4 673 aa9.14□□□□□ -0.95
USP39-215ENST00000481409 PXKQ7Z7A4 578 aa9.14□□□□□ -0.95
USP39-215ENST00000481409 YRDCQ86U90 279 aaKnown RBP9.14□□□□□ -0.95
USP39-215ENST00000481409 KIF18BQ86Y91 864 aa9.14□□□□□ -0.95
USP39-215ENST00000481409 PM20D2Q8IYS1 436 aa9.14□□□□□ -0.95
USP39-215ENST00000481409 MEIOBQ8N635 442 aa9.14□□□□□ -0.95
USP39-215ENST00000481409 OR13C2Q8NGS9 318 aa9.14□□□□□ -0.95
USP39-215ENST00000481409 FBLIM1Q8WUP2 373 aa9.14□□□□□ -0.95
USP39-215ENST00000481409 EXTL1Q92935 676 aa9.14□□□□□ -0.95
USP39-215ENST00000481409 ABTB1Q969K4 478 aaPredicted RBP9.14□□□□□ -0.95
USP39-215ENST00000481409 WBP1Q96G27 269 aa9.14□□□□□ -0.95
USP39-215ENST00000481409 ARL5BQ96KC2 179 aa9.14□□□□□ -0.95
USP39-215ENST00000481409 ZNF570Q96NI8 536 aa9.14□□□□□ -0.95
USP39-215ENST00000481409 MUS81Q96NY9 551 aa9.14□□□□□ -0.95
USP39-215ENST00000481409 MOGAT1Q96PD6 335 aa9.14□□□□□ -0.95
USP39-215ENST00000481409 OR5B2Q96R09 309 aa9.14□□□□□ -0.95
USP39-215ENST00000481409 SNX18Q96RF0 628 aa9.14□□□□□ -0.95
USP39-215ENST00000481409 TNFRSF13CQ96RJ3 184 aa9.14□□□□□ -0.95
USP39-215ENST00000481409 SF3B5Q9BWJ5 86 aaKnown RBP9.14□□□□□ -0.95
USP39-215ENST00000481409 TSSK6Q9BXA6 273 aa9.14□□□□□ -0.95
USP39-215ENST00000481409 POLDIP3Q9BY77 421 aaKnown RBP9.14□□□□□ -0.95
USP39-215ENST00000481409 LDAHQ9H6V9 325 aa9.14□□□□□ -0.95
USP39-215ENST00000481409 MCCC2Q9HCC0 563 aa9.14□□□□□ -0.95
USP39-215ENST00000481409 CHST11Q9NPF2 352 aa9.14□□□□□ -0.95
USP39-215ENST00000481409 NRIP3Q9NQ35 241 aa9.14□□□□□ -0.95
USP39-215ENST00000481409 PNPLA3Q9NST1 481 aa9.14□□□□□ -0.95
USP39-215ENST00000481409 KLHL21Q9UJP4 597 aa9.14□□□□□ -0.95
USP39-215ENST00000481409 RASD1Q9Y272 281 aa9.14□□□□□ -0.95
USP39-215ENST00000481409 TP53TG5Q9Y2B4 290 aa9.14□□□□□ -0.95
USP39-215ENST00000481409 MPDZO75970 2070 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 CNTRLQ7Z7A1 2325 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 AKAP13Q12802 2813 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 TRAV27A0A087WT01 109 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 AQP7P3A6NL99 342 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 FAM166BA8MTA8 275 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 CENPBD1B2RD01 187 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 BLOC1S5-TXNDC5H3BN57 136 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 BHLHE40O14503 412 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 SOX14O95416 240 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 IMPDH2P12268 514 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 ZNF708P17019 499 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 GRPRP30550 384 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 POLR2IP36954 125 aaKnown RBP9.13□□□□□ -0.95
USP39-215ENST00000481409 LHX2P50458 406 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 CARD18P57730 90 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 FXYD6P3P58550 94 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 ISL1P61371 349 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 H3F3AP84243 136 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 EFNB1P98172 346 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 LTBQ06643 244 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 TMED1Q13445 227 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 PDK3Q15120 406 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 OR7A5Q15622 319 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 PGGHGQ32M88 737 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 LINC00303Q3SY05 128 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 TRILQ7L0X0 811 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 FAM26EQ8N5C1 309 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 LRRC75AQ8NAA5 344 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 ANKK1Q8NFD2 765 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 OR51A7Q8NH64 312 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 OR2V1Q8NHB1 315 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 RHOXF1Q8NHV9 184 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 FNDC8Q8TC99 324 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 SARAFQ96BY9 339 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 SLC25A36Q96CQ1 311 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 PLEKHA8Q96JA3 519 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 ADGRG7Q96K78 797 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 SAMD8Q96LT4 415 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 NPAS1Q99742 590 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 IFT27Q9BW83 186 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 OR11A1Q9GZK7 315 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 EGLN3Q9H6Z9 239 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 CMC2Q9NRP2 79 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 INIPQ9NRY2 104 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 BLOC1S6Q9UL45 172 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 CSAG2Q9Y5P2 127 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 NOX1Q9Y5S8 564 aa9.13□□□□□ -0.95
USP39-215ENST00000481409 A0A0J9YW62 118 aa9.12□□□□□ -0.95
USP39-215ENST00000481409 A0A1W2PRG6 482 aa9.12□□□□□ -0.95
USP39-215ENST00000481409 A6NIZ1 184 aa9.12□□□□□ -0.95
USP39-215ENST00000481409 SHISA8B8ZZ34 492 aa9.12□□□□□ -0.95
USP39-215ENST00000481409 M0R082 166 aa9.12□□□□□ -0.95
USP39-215ENST00000481409 ERVH48-1M5A8F1 160 aa9.12□□□□□ -0.95
USP39-215ENST00000481409 PDGFAP04085 211 aa9.12□□□□□ -0.95
USP39-215ENST00000481409 CCDC159P0C7I6 412 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms