RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 PRLHRP49683 370 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 GALEQ14376 348 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 CLECL1Q8IZS7 167 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 DMBX1Q8NFW5 382 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 NRIP3Q9NQ35 241 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 MOKQ9UQ07 419 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 CORINQ9Y5Q5 1042 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 NRAPQ86VF7 1730 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 PRAMEF27A3QJZ7 478 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 SDC1P18827 310 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 HLA-DMAP28067 261 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 HENMT1Q5T8I9 393 aaKnown RBP8.9□□□□□ -0.98
VEGFA-212ENST00000480614 HIST2H3PS2Q5TEC6 136 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 PRAMEF9Q5VWM5 478 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 OR1S2Q8NGQ3 325 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 CDS1Q92903 461 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 PRR11Q96HE9 360 aaPredicted RBP8.9□□□□□ -0.98
VEGFA-212ENST00000480614 ADOQ96SZ5 270 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 TMEM59Q9BXS4 323 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 C1orf198Q9H425 327 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 TRAPPC2LQ9UL33 140 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 PRSS38A1L453 326 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 TMEM221A6NGB7 291 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 NPIPB15A6NHN6 443 aaPredicted RBP8.9□□□□□ -0.98
VEGFA-212ENST00000480614 IMPA1P29218 277 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 SLC16A14Q7RTX9 510 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 SLC46A3Q7Z3Q1 461 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 CCDC71Q8IV32 467 aaPredicted RBP8.9□□□□□ -0.98
VEGFA-212ENST00000480614 C3orf58Q8NDZ4 430 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 KIRREL1Q96J84 757 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 SUB1P53999 127 aaKnown RBP eCLIP8.9□□□□□ -0.98
VEGFA-212ENST00000480614 GRB2P62993 217 aaKnown RBP8.9□□□□□ -0.98
VEGFA-212ENST00000480614 GGTA1PQ4G0N0 100 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 C15orf39Q6ZRI6 1047 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 MFSD6LQ8IWD5 586 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 CPXM2Q8N436 756 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 OR2A12Q8NGT7 310 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 TFAP2CQ92754 450 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 BSCL2Q96G97 398 aaPredicted RBP8.9□□□□□ -0.98
VEGFA-212ENST00000480614 CAPNS1P04632 268 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 AOAHP28039 575 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 IL10RAQ13651 578 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 CYB561A3Q8NBI2 242 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 AGBL5Q8NDL9 886 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 BOD1Q96IK1 185 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 BOCQ9BWV1 1114 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 AADACP22760 399 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 SOHLH1Q5JUK2 328 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 C15orf54Q8N8G6 183 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 DNAJA3Q96EY1 480 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 DECR2Q9NUI1 292 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 HCRTO43612 131 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 TPPPO94811 219 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 RPS17P08708 135 aaKnown RBP8.9□□□□□ -0.98
VEGFA-212ENST00000480614 ZNF691Q5VV52 312 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 ZNF765Q7L2R6 523 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 APCDD1Q8J025 514 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 RNF175Q8N4F7 328 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 OR5AR1Q8NGP9 310 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 BORCS6Q96GS4 357 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 GINS3Q9BRX5 216 aa8.9□□□□□ -0.98
VEGFA-212ENST00000480614 C1orf105O95561 183 aa8.9□□□□□ -0.99
VEGFA-212ENST00000480614 OPRL1P41146 370 aa8.9□□□□□ -0.99
VEGFA-212ENST00000480614 CXCL12P48061 93 aa8.9□□□□□ -0.99
VEGFA-212ENST00000480614 OR52W1Q6IF63 320 aa8.9□□□□□ -0.99
VEGFA-212ENST00000480614 RAB3CQ96E17 227 aa8.9□□□□□ -0.99
VEGFA-212ENST00000480614 TIMM8AO60220 97 aaPredicted RBP8.9□□□□□ -0.99
VEGFA-212ENST00000480614 SUSD5O60279 629 aa8.9□□□□□ -0.99
VEGFA-212ENST00000480614 SLC16A7O60669 478 aa8.9□□□□□ -0.99
VEGFA-212ENST00000480614 ETV4P43268 484 aa8.9□□□□□ -0.99
VEGFA-212ENST00000480614 APOOLQ6UXV4 268 aa8.9□□□□□ -0.99
VEGFA-212ENST00000480614 ADGRG5Q8IZF4 528 aa8.9□□□□□ -0.99
VEGFA-212ENST00000480614 HPGDSO60760 199 aa8.9□□□□□ -0.99
VEGFA-212ENST00000480614 RAB6AP20340 208 aa8.9□□□□□ -0.99
VEGFA-212ENST00000480614 DPP4P27487 766 aa8.9□□□□□ -0.99
VEGFA-212ENST00000480614 ETV5P41161 510 aa8.9□□□□□ -0.99
VEGFA-212ENST00000480614 PPT1P50897 306 aa8.9□□□□□ -0.99
VEGFA-212ENST00000480614 SNTB1Q13884 538 aaKnown RBP8.9□□□□□ -0.99
VEGFA-212ENST00000480614 TATDN3Q17R31 274 aa8.9□□□□□ -0.99
VEGFA-212ENST00000480614 GPRIN1Q7Z2K8 1008 aa8.9□□□□□ -0.99
VEGFA-212ENST00000480614 SELPLGQ14242 412 aa8.89□□□□□ -0.99
VEGFA-212ENST00000480614 MOB3CQ70IA8 216 aa8.89□□□□□ -0.99
VEGFA-212ENST00000480614 BPIFB2Q8N4F0 458 aa8.89□□□□□ -0.99
VEGFA-212ENST00000480614 FGGYQ96C11 551 aa8.89□□□□□ -0.99
VEGFA-212ENST00000480614 ZNF597Q96LX8 424 aa8.89□□□□□ -0.99
VEGFA-212ENST00000480614 ULBP3Q9BZM4 244 aa8.89□□□□□ -0.99
VEGFA-212ENST00000480614 KCPQ6ZWJ8 1503 aa8.89□□□□□ -0.99
VEGFA-212ENST00000480614 SPINT2O43291 252 aa8.89□□□□□ -0.99
VEGFA-212ENST00000480614 NFATC4Q14934 902 aa8.89□□□□□ -0.99
VEGFA-212ENST00000480614 RNLSQ5VYX0 342 aa8.89□□□□□ -0.99
VEGFA-212ENST00000480614 PRICKLE2Q7Z3G6 844 aa8.89□□□□□ -0.99
VEGFA-212ENST00000480614 GATA6Q92908 595 aa8.89□□□□□ -0.99
VEGFA-212ENST00000480614 BADQ92934 168 aa8.89□□□□□ -0.99
VEGFA-212ENST00000480614 KHSRPQ92945 711 aaKnown RBP eCLIP8.89□□□□□ -0.991e-9■■■□□ 15.1
VEGFA-212ENST00000480614 GSTO2Q9H4Y5 243 aa8.89□□□□□ -0.99
VEGFA-212ENST00000480614 PATZ1Q9HBE1 687 aaKnown RBP8.89□□□□□ -0.99
VEGFA-212ENST00000480614 MUTYHQ9UIF7 546 aa8.89□□□□□ -0.99
VEGFA-212ENST00000480614 RASD1Q9Y272 281 aa8.89□□□□□ -0.99
VEGFA-212ENST00000480614 CLDN24A6NM45 220 aa8.89□□□□□ -0.99
VEGFA-212ENST00000480614 AGPAT2O15120 278 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms