RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 SLCO1B7G3V0H7 640 aa16.43■□□□□ 0.22
ABCF3-214ENST00000480562 IFNA2P01563 188 aa16.43■□□□□ 0.22
ABCF3-214ENST00000480562 NUDT7P0C024 238 aa16.43■□□□□ 0.22
ABCF3-214ENST00000480562 VLDLRP98155 873 aa16.43■□□□□ 0.22
ABCF3-214ENST00000480562 HOXC5Q00444 222 aa16.43■□□□□ 0.22
ABCF3-214ENST00000480562 MST1LQ2TV78 715 aa16.43■□□□□ 0.22
ABCF3-214ENST00000480562 C6orf10Q5SRN2 563 aa16.43■□□□□ 0.22
ABCF3-214ENST00000480562 PRAMEF8Q5VWM4 474 aa16.43■□□□□ 0.22
ABCF3-214ENST00000480562 PRAMEF7Q5VXH5 474 aa16.43■□□□□ 0.22
ABCF3-214ENST00000480562 ATG16L1Q676U5 607 aa16.43■□□□□ 0.22
ABCF3-214ENST00000480562 LINGO2Q7L985 606 aa16.43■□□□□ 0.22
ABCF3-214ENST00000480562 KDM8Q8N371 416 aa16.43■□□□□ 0.22
ABCF3-214ENST00000480562 OR1K1Q8NGR3 316 aa16.43■□□□□ 0.22
ABCF3-214ENST00000480562 C3orf49Q96BT1 292 aa16.43■□□□□ 0.22
ABCF3-214ENST00000480562 MAELQ96JY0 434 aaKnown RBP16.43■□□□□ 0.22
ABCF3-214ENST00000480562 SPATA9Q9BWV2 254 aa16.43■□□□□ 0.22
ABCF3-214ENST00000480562 PIF1Q9H611 641 aa16.43■□□□□ 0.22
ABCF3-214ENST00000480562 RMND5AQ9H871 391 aa16.43■□□□□ 0.22
ABCF3-214ENST00000480562 SDR39U1Q9NRG7 319 aaPredicted RBP16.43■□□□□ 0.22
ABCF3-214ENST00000480562 ZNF232Q9UNY5 417 aa16.43■□□□□ 0.22
ABCF3-214ENST00000480562 YLPM1P49750 1951 aaKnown RBP16.42■□□□□ 0.22
ABCF3-214ENST00000480562 A0A0G2JPF8 293 aa16.42■□□□□ 0.22
ABCF3-214ENST00000480562 TMEM229AB2RXF0 380 aa16.42■□□□□ 0.22
ABCF3-214ENST00000480562 HNRNPCL2B2RXH8 293 aa16.42■□□□□ 0.22
ABCF3-214ENST00000480562 HNRNPCL3B7ZW38 293 aa16.42■□□□□ 0.22
ABCF3-214ENST00000480562 ZNF587BE7ETH6 402 aa16.42■□□□□ 0.22
ABCF3-214ENST00000480562 NR5A2O00482 541 aa16.42■□□□□ 0.22
ABCF3-214ENST00000480562 HNRNPCL1O60812 293 aaKnown RBP16.42■□□□□ 0.22
ABCF3-214ENST00000480562 NPIPB7O75200 414 aa16.42■□□□□ 0.22
ABCF3-214ENST00000480562 UPK3AO75631 287 aa16.42■□□□□ 0.22
ABCF3-214ENST00000480562 HNRNPCL4P0DMR1 293 aa16.42■□□□□ 0.22
ABCF3-214ENST00000480562 POLR2JP52435 117 aaKnown RBP16.42■□□□□ 0.22
ABCF3-214ENST00000480562 TUBA1BP68363 451 aa16.42■□□□□ 0.22
ABCF3-214ENST00000480562 TUBA4AP68366 448 aa16.42■□□□□ 0.22
ABCF3-214ENST00000480562 SWI5Q1ZZU3 235 aa16.42■□□□□ 0.22
ABCF3-214ENST00000480562 C1QTNF12Q5T7M4 302 aa16.42■□□□□ 0.22
ABCF3-214ENST00000480562 NIPAL3Q6P499 406 aa16.42■□□□□ 0.22
ABCF3-214ENST00000480562 TUBA1AQ71U36 451 aa16.42■□□□□ 0.22
ABCF3-214ENST00000480562 ABHD12BQ7Z5M8 362 aaPredicted RBP16.42■□□□□ 0.22
ABCF3-214ENST00000480562 BCL2L2Q92843 193 aaPredicted RBP16.42■□□□□ 0.22
ABCF3-214ENST00000480562 MAL2Q969L2 176 aa16.42■□□□□ 0.22
ABCF3-214ENST00000480562 SLC25A36Q96CQ1 311 aa16.42■□□□□ 0.22
ABCF3-214ENST00000480562 SLC38A2Q96QD8 506 aa16.42■□□□□ 0.22
ABCF3-214ENST00000480562 KCNK17Q96T54 332 aa16.42■□□□□ 0.22
ABCF3-214ENST00000480562 CACYBPQ9HB71 228 aaKnown RBP16.42■□□□□ 0.22
ABCF3-214ENST00000480562 ARFGEF3Q5TH69 2177 aa16.42■□□□□ 0.22
ABCF3-214ENST00000480562 A0A096LPE4 126 aa16.41■□□□□ 0.22
ABCF3-214ENST00000480562 A0A1W2PPZ6 126 aa16.41■□□□□ 0.22
ABCF3-214ENST00000480562 TMEM247A6NEH6 219 aa16.41■□□□□ 0.22
ABCF3-214ENST00000480562 UBDO15205 165 aa16.41■□□□□ 0.22
ABCF3-214ENST00000480562 VAMP5O95183 116 aa16.41■□□□□ 0.22
ABCF3-214ENST00000480562 AHSA1O95433 338 aa16.41■□□□□ 0.22
ABCF3-214ENST00000480562 F12P00748 615 aaPredicted RBP16.41■□□□□ 0.22
ABCF3-214ENST00000480562 ZSWIM7Q19AV6 140 aa16.41■□□□□ 0.22
ABCF3-214ENST00000480562 ZNF311Q5JNZ3 666 aa16.41■□□□□ 0.22
ABCF3-214ENST00000480562 MSANTD1Q6ZTZ1 278 aa16.41■□□□□ 0.22
ABCF3-214ENST00000480562 PHC2Q8IXK0 858 aa16.41■□□□□ 0.22
ABCF3-214ENST00000480562 STK35Q8TDR2 534 aa16.41■□□□□ 0.22
ABCF3-214ENST00000480562 PROX1Q92786 737 aa16.41■□□□□ 0.22
ABCF3-214ENST00000480562 BOD1Q96IK1 185 aa16.41■□□□□ 0.22
ABCF3-214ENST00000480562 SORCS2Q96PQ0 1159 aa16.41■□□□□ 0.22
ABCF3-214ENST00000480562 KCNS3Q9BQ31 491 aa16.41■□□□□ 0.22
ABCF3-214ENST00000480562 PTDSS2Q9BVG9 487 aa16.41■□□□□ 0.22
ABCF3-214ENST00000480562 ARMC7Q9H6L4 198 aa16.41■□□□□ 0.22
ABCF3-214ENST00000480562 OBP2BQ9NPH6 170 aa16.41■□□□□ 0.22
ABCF3-214ENST00000480562 SEC14L4Q9UDX3 406 aa16.41■□□□□ 0.22
ABCF3-214ENST00000480562 PRDM4Q9UKN5 801 aa16.41■□□□□ 0.22
ABCF3-214ENST00000480562 RASD1Q9Y272 281 aa16.41■□□□□ 0.22
ABCF3-214ENST00000480562 PCDHB14Q9Y5E9 798 aa16.41■□□□□ 0.22
ABCF3-214ENST00000480562 A0A096LPI6 279 aa16.4■□□□□ 0.22
ABCF3-214ENST00000480562 FTCDNL1E5RQL4 147 aa16.4■□□□□ 0.22
ABCF3-214ENST00000480562 CSF3P09919 207 aa16.4■□□□□ 0.22
ABCF3-214ENST00000480562 FAM157CP0CG43 387 aa16.4■□□□□ 0.22
ABCF3-214ENST00000480562 IGHV4-31P0DP07 118 aa16.4■□□□□ 0.22
ABCF3-214ENST00000480562 PNMTP11086 282 aa16.4■□□□□ 0.22
ABCF3-214ENST00000480562 ZNF16P17020 682 aaPredicted RBP16.4■□□□□ 0.22
ABCF3-214ENST00000480562 USF1P22415 310 aaPredicted RBP16.4■□□□□ 0.22
ABCF3-214ENST00000480562 RPS5P46782 204 aaKnown RBP16.4■□□□□ 0.22
ABCF3-214ENST00000480562 UBE2NP61088 152 aaKnown RBP16.4■□□□□ 0.22
ABCF3-214ENST00000480562 MAGOHP61326 146 aaKnown RBP16.4■□□□□ 0.22
ABCF3-214ENST00000480562 EGR4Q05215 589 aa16.4■□□□□ 0.22
ABCF3-214ENST00000480562 RGNQ15493 299 aa16.4■□□□□ 0.22
ABCF3-214ENST00000480562 CYB5R2Q6BCY4 276 aa16.4■□□□□ 0.22
ABCF3-214ENST00000480562 SLC2A7Q6PXP3 512 aa16.4■□□□□ 0.22
ABCF3-214ENST00000480562 VHLLQ6RSH7 139 aa16.4■□□□□ 0.22
ABCF3-214ENST00000480562 MIER2Q8N344 545 aa16.4■□□□□ 0.22
ABCF3-214ENST00000480562 MFSD8Q8NHS3 518 aa16.4■□□□□ 0.22
ABCF3-214ENST00000480562 GTF2H4Q92759 462 aa16.4■□□□□ 0.22
ABCF3-214ENST00000480562 PAIP1Q9H074 479 aaKnown RBP16.4■□□□□ 0.22
ABCF3-214ENST00000480562 THUMPD1Q9NXG2 353 aaKnown RBP16.4■□□□□ 0.22
ABCF3-214ENST00000480562 NKIRAS1Q9NYS0 192 aa16.4■□□□□ 0.22
ABCF3-214ENST00000480562 IFT52Q9Y366 437 aa16.4■□□□□ 0.22
ABCF3-214ENST00000480562 CLIC1O00299 241 aa16.39■□□□□ 0.21
ABCF3-214ENST00000480562 SERPINF1P36955 418 aa16.39■□□□□ 0.21
ABCF3-214ENST00000480562 CLDN17P56750 224 aa16.39■□□□□ 0.21
ABCF3-214ENST00000480562 SNRPD2P62316 118 aaKnown RBP16.39■□□□□ 0.21
ABCF3-214ENST00000480562 LSM11P83369 360 aaKnown RBP eCLIP16.39■□□□□ 0.21
ABCF3-214ENST00000480562 ROR2Q01974 943 aaKnown RBP16.39■□□□□ 0.21
ABCF3-214ENST00000480562 GGTLC2Q14390 218 aa16.39■□□□□ 0.21
ABCF3-214ENST00000480562 ANKRD16Q6P6B7 361 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms