RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 LIMS1P48059 325 aa10.9□□□□□ -0.66
TRA2B-212ENST00000480461 CASP6P55212 293 aa10.9□□□□□ -0.66
TRA2B-212ENST00000480461 CHRNB3Q05901 458 aa10.9□□□□□ -0.66
TRA2B-212ENST00000480461 KPNB1Q14974 876 aaKnown RBP10.9□□□□□ -0.66
TRA2B-212ENST00000480461 TRAM2Q15035 370 aa10.9□□□□□ -0.66
TRA2B-212ENST00000480461 MS4A18Q3C1V0 323 aa10.9□□□□□ -0.66
TRA2B-212ENST00000480461 FAM98BQ52LJ0 330 aaKnown RBP10.9□□□□□ -0.66
TRA2B-212ENST00000480461 PDSS1Q5T2R2 415 aa10.9□□□□□ -0.66
TRA2B-212ENST00000480461 CHMP1BQ7LBR1 199 aa10.9□□□□□ -0.66
TRA2B-212ENST00000480461 SLC46A3Q7Z3Q1 461 aa10.9□□□□□ -0.66
TRA2B-212ENST00000480461 TMEM179BQ7Z7N9 219 aa10.9□□□□□ -0.66
TRA2B-212ENST00000480461 ZNF295-AS1Q8N0V1 137 aa10.9□□□□□ -0.66
TRA2B-212ENST00000480461 KDM8Q8N371 416 aa10.9□□□□□ -0.66
TRA2B-212ENST00000480461 OR4C15Q8NGM1 316 aa10.9□□□□□ -0.66
TRA2B-212ENST00000480461 ABHD3Q8WU67 409 aa10.9□□□□□ -0.66
TRA2B-212ENST00000480461 CPNE4Q96A23 557 aaPredicted RBP10.9□□□□□ -0.66
TRA2B-212ENST00000480461 ZNF775Q96BV0 537 aaPredicted RBP10.9□□□□□ -0.66
TRA2B-212ENST00000480461 INTS12Q96CB8 462 aaKnown RBP10.9□□□□□ -0.66
TRA2B-212ENST00000480461 DUS3LQ96G46 650 aaKnown RBP10.9□□□□□ -0.66
TRA2B-212ENST00000480461 GPA33Q99795 319 aa10.9□□□□□ -0.66
TRA2B-212ENST00000480461 CHST11Q9NPF2 352 aa10.9□□□□□ -0.66
TRA2B-212ENST00000480461 SELENONQ9NZV5 590 aa10.9□□□□□ -0.66
TRA2B-212ENST00000480461 CLEC4AQ9UMR7 237 aa10.9□□□□□ -0.66
TRA2B-212ENST00000480461 AURKCQ9UQB9 309 aa10.9□□□□□ -0.66
TRA2B-212ENST00000480461 FAM32AQ9Y421 112 aaKnown RBP10.9□□□□□ -0.66
TRA2B-212ENST00000480461 NAV3Q8IVL0 2385 aa10.9□□□□□ -0.66
TRA2B-212ENST00000480461 MYO7BQ6PIF6 2116 aa10.9□□□□□ -0.67
TRA2B-212ENST00000480461 SPG11Q96JI7 2443 aa10.89□□□□□ -0.67
TRA2B-212ENST00000480461 ZNF716A6NP11 495 aa10.89□□□□□ -0.67
TRA2B-212ENST00000480461 CYTIPO60759 359 aa10.89□□□□□ -0.67
TRA2B-212ENST00000480461 FKBP6O75344 327 aa10.89□□□□□ -0.67
TRA2B-212ENST00000480461 TNFSF13O75888 250 aa10.89□□□□□ -0.67
TRA2B-212ENST00000480461 CH25HO95992 272 aa10.89□□□□□ -0.67
TRA2B-212ENST00000480461 HPRP00739 348 aa10.89□□□□□ -0.67
TRA2B-212ENST00000480461 GPIP06744 558 aa10.89□□□□□ -0.67
TRA2B-212ENST00000480461 ITGA2P17301 1181 aa10.89□□□□□ -0.67
TRA2B-212ENST00000480461 EDNRAP25101 427 aa10.89□□□□□ -0.67
TRA2B-212ENST00000480461 GRPRP30550 384 aa10.89□□□□□ -0.67
TRA2B-212ENST00000480461 RRM2P31350 389 aa10.89□□□□□ -0.67
TRA2B-212ENST00000480461 RBM34P42696 430 aaKnown RBP10.89□□□□□ -0.67
TRA2B-212ENST00000480461 KIR2DL2P43627 348 aaPredicted RBP10.89□□□□□ -0.67
TRA2B-212ENST00000480461 IST1P53990 364 aa10.89□□□□□ -0.67
TRA2B-212ENST00000480461 ACTR3P61158 418 aa10.89□□□□□ -0.67
TRA2B-212ENST00000480461 SLC35A1P78382 337 aa10.89□□□□□ -0.67
TRA2B-212ENST00000480461 FHL1Q13642 323 aa10.89□□□□□ -0.67
TRA2B-212ENST00000480461 ZNF74Q16587 644 aa10.89□□□□□ -0.67
TRA2B-212ENST00000480461 FAM69AQ5T7M9 428 aa10.89□□□□□ -0.67
TRA2B-212ENST00000480461 RIPPLY2Q5TAB7 128 aa10.89□□□□□ -0.67
TRA2B-212ENST00000480461 TMEM211Q6ICI0 200 aa10.89□□□□□ -0.67
TRA2B-212ENST00000480461 FCRLAQ7L513 359 aa10.89□□□□□ -0.67
TRA2B-212ENST00000480461 CYP4Z1Q86W10 505 aa10.89□□□□□ -0.67
TRA2B-212ENST00000480461 NRMQ8IXM6 262 aa10.89□□□□□ -0.67
TRA2B-212ENST00000480461 GCNT2Q8N0V5 402 aa10.89□□□□□ -0.67
TRA2B-212ENST00000480461 ZIC4Q8N9L1 334 aa10.89□□□□□ -0.67
TRA2B-212ENST00000480461 OR6S1Q8NH40 331 aa10.89□□□□□ -0.67
TRA2B-212ENST00000480461 RNF128Q8TEB7 428 aa10.89□□□□□ -0.67
TRA2B-212ENST00000480461 ACOT11Q8WXI4 607 aaPredicted RBP10.89□□□□□ -0.67
TRA2B-212ENST00000480461 HS6ST2Q96MM7 605 aa10.89□□□□□ -0.67
TRA2B-212ENST00000480461 ZNF347Q96SE7 839 aa10.89□□□□□ -0.67
TRA2B-212ENST00000480461 SLC19A3Q9BZV2 496 aa10.89□□□□□ -0.67
TRA2B-212ENST00000480461 TRIM15Q9C019 465 aa10.89□□□□□ -0.67
TRA2B-212ENST00000480461 NTN4Q9HB63 628 aa10.89□□□□□ -0.67
TRA2B-212ENST00000480461 TIGARQ9NQ88 270 aa10.89□□□□□ -0.67
TRA2B-212ENST00000480461 PAQR5Q9NXK6 330 aaPredicted RBP10.89□□□□□ -0.67
TRA2B-212ENST00000480461 KLHL13Q9P2N7 655 aa10.89□□□□□ -0.67
TRA2B-212ENST00000480461 RNF6Q9Y252 685 aa10.89□□□□□ -0.67
TRA2B-212ENST00000480461 NIPBLQ6KC79 2804 aaeCLIP10.89□□□□□ -0.67
TRA2B-212ENST00000480461 SH3PXD2BA1X283 911 aa10.88□□□□□ -0.67
TRA2B-212ENST00000480461 ERICH4A6NGS2 130 aa10.88□□□□□ -0.67
TRA2B-212ENST00000480461 AQP7P3A6NL99 342 aa10.88□□□□□ -0.67
TRA2B-212ENST00000480461 H3BNX3 289 aa10.88□□□□□ -0.67
TRA2B-212ENST00000480461 M0R082 166 aa10.88□□□□□ -0.67
TRA2B-212ENST00000480461 TIPRLO75663 272 aa10.88□□□□□ -0.67
TRA2B-212ENST00000480461 GADD45GO95257 159 aa10.88□□□□□ -0.67
TRA2B-212ENST00000480461 AHSA1O95433 338 aa10.88□□□□□ -0.67
TRA2B-212ENST00000480461 SYNGR4O95473 234 aa10.88□□□□□ -0.67
TRA2B-212ENST00000480461 STAMBPO95630 424 aa10.88□□□□□ -0.67
TRA2B-212ENST00000480461 CGAP01215 116 aa10.88□□□□□ -0.67
TRA2B-212ENST00000480461 ASAH2BP0C7U1 165 aa10.88□□□□□ -0.67
TRA2B-212ENST00000480461 CTBP2P56545 445 aa10.88□□□□□ -0.67
TRA2B-212ENST00000480461 KRTAP10-9P60411 292 aa10.88□□□□□ -0.67
TRA2B-212ENST00000480461 CSNK2A1P68400 391 aaPredicted RBP10.88□□□□□ -0.67
TRA2B-212ENST00000480461 SPIBQ01892 262 aa10.88□□□□□ -0.67
TRA2B-212ENST00000480461 PRKCDQ05655 676 aa10.88□□□□□ -0.67
TRA2B-212ENST00000480461 SLC17A1Q14916 467 aa10.88□□□□□ -0.67
TRA2B-212ENST00000480461 LAPTM4AQ15012 233 aa10.88□□□□□ -0.67
TRA2B-212ENST00000480461 SF3B4Q15427 424 aaKnown RBP eCLIP10.88□□□□□ -0.67
TRA2B-212ENST00000480461 OR2T5Q6IEZ7 315 aa10.88□□□□□ -0.67
TRA2B-212ENST00000480461 PPP4R4Q6NUP7 873 aa10.88□□□□□ -0.67
TRA2B-212ENST00000480461 PAQR6Q6TCH4 344 aa10.88□□□□□ -0.67
TRA2B-212ENST00000480461 MBOAT2Q6ZWT7 520 aa10.88□□□□□ -0.67
TRA2B-212ENST00000480461 NUFIP2Q7Z417 695 aaKnown RBP10.88□□□□□ -0.67
TRA2B-212ENST00000480461 BTLAQ7Z6A9 289 aa10.88□□□□□ -0.67
TRA2B-212ENST00000480461 ZER1Q7Z7L7 766 aa10.88□□□□□ -0.67
TRA2B-212ENST00000480461 WDFY1Q8IWB7 410 aa10.88□□□□□ -0.67
TRA2B-212ENST00000480461 TUSC5Q8IXB3 177 aa10.88□□□□□ -0.67
TRA2B-212ENST00000480461 OR2T29Q8NH02 315 aa10.88□□□□□ -0.67
TRA2B-212ENST00000480461 ZNF417Q8TAU3 575 aa10.88□□□□□ -0.67
TRA2B-212ENST00000480461 LIPHQ8WWY8 451 aa10.88□□□□□ -0.67
TRA2B-212ENST00000480461 RND1Q92730 232 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms