RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 SERPINB4P48594 390 aa9.94□□□□□ -0.82
USP11-208ENST00000480104 SELENOPP49908 381 aa9.94□□□□□ -0.82
USP11-208ENST00000480104 CCNG1P51959 295 aa9.94□□□□□ -0.82
USP11-208ENST00000480104 PRKAG1P54619 331 aa9.94□□□□□ -0.82
USP11-208ENST00000480104 SH3BGRP55822 239 aaPredicted RBP9.94□□□□□ -0.82
USP11-208ENST00000480104 ROR2Q01974 943 aaKnown RBP9.94□□□□□ -0.82
USP11-208ENST00000480104 PAX2Q02962 417 aa9.94□□□□□ -0.82
USP11-208ENST00000480104 ZKSCAN8Q15776 578 aaPredicted RBP9.94□□□□□ -0.82
USP11-208ENST00000480104 TRMT5Q32P41 509 aaKnown RBP9.94□□□□□ -0.82
USP11-208ENST00000480104 GPR157Q5UAW9 335 aa9.94□□□□□ -0.82
USP11-208ENST00000480104 BTNL3Q6UXE8 466 aa9.94□□□□□ -0.82
USP11-208ENST00000480104 SELENOMQ8WWX9 145 aa9.94□□□□□ -0.82
USP11-208ENST00000480104 R3HDM4Q96D70 268 aa9.94□□□□□ -0.82
USP11-208ENST00000480104 BRF2Q9HAW0 419 aa9.94□□□□□ -0.82
USP11-208ENST00000480104 PATZ1Q9HBE1 687 aaKnown RBP9.94□□□□□ -0.82
USP11-208ENST00000480104 PALMDQ9NP74 551 aa9.94□□□□□ -0.82
USP11-208ENST00000480104 CTPS2Q9NRF8 586 aa9.94□□□□□ -0.82
USP11-208ENST00000480104 CHRNA9Q9UGM1 479 aa9.94□□□□□ -0.82
USP11-208ENST00000480104 IL20RAQ9UHF4 553 aa9.94□□□□□ -0.82
USP11-208ENST00000480104 GPR160Q9UJ42 338 aa9.94□□□□□ -0.82
USP11-208ENST00000480104 SPIN1Q9Y657 262 aaPredicted RBP9.94□□□□□ -0.82
USP11-208ENST00000480104 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.93□□□□□ -0.82
USP11-208ENST00000480104 E9PQ18 207 aa9.93□□□□□ -0.82
USP11-208ENST00000480104 ZNF264O43296 627 aa9.93□□□□□ -0.82
USP11-208ENST00000480104 SBK2P0C263 348 aa9.93□□□□□ -0.82
USP11-208ENST00000480104 UBL4AP11441 157 aa9.93□□□□□ -0.82
USP11-208ENST00000480104 ALDH18A1P54886 795 aaKnown RBP9.93□□□□□ -0.82
USP11-208ENST00000480104 GALK2Q01415 458 aa9.93□□□□□ -0.82
USP11-208ENST00000480104 FRG1Q14331 258 aaKnown RBP9.93□□□□□ -0.82
USP11-208ENST00000480104 ESCO2Q56NI9 601 aa9.93□□□□□ -0.82
USP11-208ENST00000480104 CDC73Q6P1J9 531 aa9.93□□□□□ -0.82
USP11-208ENST00000480104 LRRN1Q6UXK5 716 aa9.93□□□□□ -0.82
USP11-208ENST00000480104 ZNF551Q7Z340 670 aaPredicted RBP9.93□□□□□ -0.82
USP11-208ENST00000480104 RNF144BQ7Z419 303 aa9.93□□□□□ -0.82
USP11-208ENST00000480104 SZRD1Q7Z422 152 aa9.93□□□□□ -0.82
USP11-208ENST00000480104 SPICQ8N5J4 248 aa9.93□□□□□ -0.82
USP11-208ENST00000480104 CDC26Q8NHZ8 85 aa9.93□□□□□ -0.82
USP11-208ENST00000480104 MAIP1Q8WWC4 291 aa9.93□□□□□ -0.82
USP11-208ENST00000480104 GIMAP5Q96F15 307 aa9.93□□□□□ -0.82
USP11-208ENST00000480104 THUMPD3Q9BV44 507 aaKnown RBP9.93□□□□□ -0.82
USP11-208ENST00000480104 CCDC106Q9BWC9 280 aa9.93□□□□□ -0.82
USP11-208ENST00000480104 EBPLQ9BY08 206 aa9.93□□□□□ -0.82
USP11-208ENST00000480104 TRIM5Q9C035 493 aa9.93□□□□□ -0.82
USP11-208ENST00000480104 NMRAL1Q9HBL8 299 aa9.93□□□□□ -0.82
USP11-208ENST00000480104 ACER3Q9NUN7 267 aa9.93□□□□□ -0.82
USP11-208ENST00000480104 DCAF16Q9NXF7 216 aa9.93□□□□□ -0.82
USP11-208ENST00000480104 GRHL1Q9NZI5 618 aa9.93□□□□□ -0.82
USP11-208ENST00000480104 TMEM181Q9P2C4 612 aa9.93□□□□□ -0.82
USP11-208ENST00000480104 VPS29Q9UBQ0 182 aa9.93□□□□□ -0.82
USP11-208ENST00000480104 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.93□□□□□ -0.82
USP11-208ENST00000480104 SIGLEC9Q9Y336 463 aa9.93□□□□□ -0.82
USP11-208ENST00000480104 IGHV2-70DA0A0C4DH43 119 aa9.92□□□□□ -0.82
USP11-208ENST00000480104 SYCE1LA8MT33 242 aa9.92□□□□□ -0.82
USP11-208ENST00000480104 F5H0A9 414 aaPredicted RBP9.92□□□□□ -0.82
USP11-208ENST00000480104 EIF4E2O60573 245 aaKnown RBP9.92□□□□□ -0.82
USP11-208ENST00000480104 EIF1BO60739 113 aaKnown RBP9.92□□□□□ -0.82
USP11-208ENST00000480104 CYP7B1O75881 506 aa9.92□□□□□ -0.82
USP11-208ENST00000480104 UBOX5O94941 541 aa9.92□□□□□ -0.82
USP11-208ENST00000480104 HSPA4LO95757 839 aa9.92□□□□□ -0.82
USP11-208ENST00000480104 HLA-HP01893 362 aa9.92□□□□□ -0.82
USP11-208ENST00000480104 CHN1P15882 459 aa9.92□□□□□ -0.82
USP11-208ENST00000480104 ATP6V1C1P21283 382 aa9.92□□□□□ -0.82
USP11-208ENST00000480104 IER3P46695 156 aa9.92□□□□□ -0.82
USP11-208ENST00000480104 KLF3P57682 345 aaPredicted RBP9.92□□□□□ -0.82
USP11-208ENST00000480104 PCBP3P57721 371 aaKnown RBP9.92□□□□□ -0.82
USP11-208ENST00000480104 BPIFB3P59826 476 aa9.92□□□□□ -0.82
USP11-208ENST00000480104 SLC35A1P78382 337 aa9.92□□□□□ -0.82
USP11-208ENST00000480104 POU6F2P78424 691 aaPredicted RBP9.92□□□□□ -0.82
USP11-208ENST00000480104 SLC3A1Q07837 685 aa9.92□□□□□ -0.82
USP11-208ENST00000480104 ZNF763Q0D2J5 394 aa9.92□□□□□ -0.82
USP11-208ENST00000480104 HSPB3Q12988 150 aa9.92□□□□□ -0.82
USP11-208ENST00000480104 SKP2Q13309 424 aa9.92□□□□□ -0.82
USP11-208ENST00000480104 ZBTB37Q5TC79 503 aa9.92□□□□□ -0.82
USP11-208ENST00000480104 CMIPQ8IY22 773 aa9.92□□□□□ -0.82
USP11-208ENST00000480104 KLHL36Q8N4N3 616 aa9.92□□□□□ -0.82
USP11-208ENST00000480104 NEURL3Q96EH8 262 aa9.92□□□□□ -0.82
USP11-208ENST00000480104 NSUN5Q96P11 429 aaKnown RBP9.92□□□□□ -0.82
USP11-208ENST00000480104 MS4A4EQ96PG1 132 aa9.92□□□□□ -0.82
USP11-208ENST00000480104 GPR22Q99680 433 aa9.92□□□□□ -0.82
USP11-208ENST00000480104 NAA11Q9BSU3 229 aaPredicted RBP9.92□□□□□ -0.82
USP11-208ENST00000480104 CNTD2Q9H8S5 307 aa9.92□□□□□ -0.82
USP11-208ENST00000480104 TMEM165Q9HC07 324 aa9.92□□□□□ -0.82
USP11-208ENST00000480104 NMRK1Q9NWW6 199 aa9.92□□□□□ -0.82
USP11-208ENST00000480104 NPTNQ9Y639 398 aa9.92□□□□□ -0.82
USP11-208ENST00000480104 POC1B-GALNT4F8VUJ3 575 aa9.91□□□□□ -0.82
USP11-208ENST00000480104 TNFRSF13BO14836 293 aaPredicted RBP9.91□□□□□ -0.82
USP11-208ENST00000480104 DNAJA2O60884 412 aa9.91□□□□□ -0.82
USP11-208ENST00000480104 IFI6P09912 130 aa9.91□□□□□ -0.82
USP11-208ENST00000480104 UROSP10746 265 aa9.91□□□□□ -0.82
USP11-208ENST00000480104 IMPDH2P12268 514 aa9.91□□□□□ -0.82
USP11-208ENST00000480104 ZNF14P17017 642 aaPredicted RBP9.91□□□□□ -0.82
USP11-208ENST00000480104 CD33P20138 364 aa9.91□□□□□ -0.82
USP11-208ENST00000480104 CCNA2P20248 432 aa9.91□□□□□ -0.82
USP11-208ENST00000480104 IVDP26440 423 aa9.91□□□□□ -0.82
USP11-208ENST00000480104 GABRA5P31644 462 aa9.91□□□□□ -0.82
USP11-208ENST00000480104 RPL4P36578 427 aaKnown RBP9.91□□□□□ -0.82
USP11-208ENST00000480104 SELENOVP59797 346 aa9.91□□□□□ -0.82
USP11-208ENST00000480104 GLO1Q04760 184 aa9.91□□□□□ -0.82
USP11-208ENST00000480104 GGTA1PQ4G0N0 100 aa9.91□□□□□ -0.82
USP11-208ENST00000480104 NKAPLQ5M9Q1 402 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms