RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 NPTNQ9Y639 398 aa22.52■■□□□ 1.2
SYNGAP1-206ENST00000479510 TGFBR3LH3BV60 316 aa22.51■■□□□ 1.19
SYNGAP1-206ENST00000479510 GABARAPH6UMI1 98 aa22.51■■□□□ 1.19
SYNGAP1-206ENST00000479510 GPR171O14626 319 aa22.51■■□□□ 1.19
SYNGAP1-206ENST00000479510 HCRTR1O43613 425 aa22.51■■□□□ 1.19
SYNGAP1-206ENST00000479510 RAB40ALP0C0E4 278 aa22.51■■□□□ 1.19
SYNGAP1-206ENST00000479510 POU3F3P20264 500 aaPredicted RBP22.51■■□□□ 1.19
SYNGAP1-206ENST00000479510 GALNSP34059 522 aa22.51■■□□□ 1.19
SYNGAP1-206ENST00000479510 ADH7P40394 386 aa22.51■■□□□ 1.19
SYNGAP1-206ENST00000479510 CCR9P51686 369 aa22.51■■□□□ 1.19
SYNGAP1-206ENST00000479510 ZNF267Q14586 743 aaPredicted RBP22.51■■□□□ 1.19
SYNGAP1-206ENST00000479510 LINC01590Q5TEZ4 76 aa22.51■■□□□ 1.19
SYNGAP1-206ENST00000479510 FAM71CQ8NEG0 241 aa22.51■■□□□ 1.19
SYNGAP1-206ENST00000479510 OR6C4Q8NGE1 309 aa22.51■■□□□ 1.19
SYNGAP1-206ENST00000479510 RAB40AQ8WXH6 277 aa22.51■■□□□ 1.19
SYNGAP1-206ENST00000479510 ZNF593O00488 134 aaPredicted RBP22.51■■□□□ 1.19
SYNGAP1-206ENST00000479510 GNB5O14775 395 aa22.51■■□□□ 1.19
SYNGAP1-206ENST00000479510 PIN1P1O15428 100 aa22.51■■□□□ 1.19
SYNGAP1-206ENST00000479510 PEX14O75381 377 aa22.51■■□□□ 1.19
SYNGAP1-206ENST00000479510 ANKRD34CP0C6C1 535 aa22.51■■□□□ 1.19
SYNGAP1-206ENST00000479510 CALCBP10092 127 aa22.51■■□□□ 1.19
SYNGAP1-206ENST00000479510 DPP4P27487 766 aa22.51■■□□□ 1.19
SYNGAP1-206ENST00000479510 NUDT1P36639 197 aa22.51■■□□□ 1.19
SYNGAP1-206ENST00000479510 CCR6P51684 374 aa22.51■■□□□ 1.19
SYNGAP1-206ENST00000479510 HYAL1Q12794 435 aa22.51■■□□□ 1.19
SYNGAP1-206ENST00000479510 KLHL26Q53HC5 615 aa22.51■■□□□ 1.19
SYNGAP1-206ENST00000479510 SLC16A9Q7RTY1 509 aa22.51■■□□□ 1.19
SYNGAP1-206ENST00000479510 SLC22A18ASQ8N1D0 253 aa22.51■■□□□ 1.19
SYNGAP1-206ENST00000479510 OR6K6Q8NGW6 343 aa22.51■■□□□ 1.19
SYNGAP1-206ENST00000479510 ZNRF4Q8WWF5 429 aa22.51■■□□□ 1.19
SYNGAP1-206ENST00000479510 GIMAP1Q8WWP7 306 aa22.51■■□□□ 1.19
SYNGAP1-206ENST00000479510 DERL3Q96Q80 235 aa22.51■■□□□ 1.19
SYNGAP1-206ENST00000479510 NANSQ9NR45 359 aa22.51■■□□□ 1.19
SYNGAP1-206ENST00000479510 RXFP3Q9NSD7 469 aa22.51■■□□□ 1.19
SYNGAP1-206ENST00000479510 SCP2D1Q9UJQ7 156 aa22.51■■□□□ 1.19
SYNGAP1-206ENST00000479510 HIF3AQ9Y2N7 669 aa22.51■■□□□ 1.19
SYNGAP1-206ENST00000479510 OR10H1Q9Y4A9 318 aa22.51■■□□□ 1.19
SYNGAP1-206ENST00000479510 ARHGEF17Q96PE2 2063 aaPredicted RBP22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 SEMA4FO95754 770 aa22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 RAF1P04049 648 aa22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 WNT1P04628 370 aa22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 MAPK3P27361 379 aaPredicted RBP22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 MNDAP41218 407 aa22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 GRK6P43250 576 aa22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 PPP1CAP62136 330 aa22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 ST3GAL2Q16842 350 aa22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 ESCO2Q56NI9 601 aa22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 WBP2NLQ6ICG8 309 aa22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 LYPD8Q6UX82 237 aa22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 MARVELD3Q96A59 401 aa22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 PELOQ9BRX2 385 aaKnown RBP22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 ALG12Q9BV10 488 aa22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 PBX4Q9BYU1 374 aa22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 C2orf42Q9NWW7 574 aa22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 LRIT1Q9P2V4 623 aa22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 V9GY05 133 aa22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 A0A0A6YYC8 382 aaPredicted RBP22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 I3L1I5 382 aaPredicted RBP22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 HRKO00198 91 aa22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 KHNYNO15037 678 aaKnown RBP22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 TGM6O95932 706 aa22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 MT-ND4P03905 459 aa22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 PSMB10P40306 273 aa22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 EPHA4P54764 986 aa22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 ERVK-25P63136 954 aa22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 HHEXQ03014 270 aa22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 TEX261Q6UWH6 196 aa22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 TAF8Q7Z7C8 310 aa22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 ZNF687Q8N1G0 1237 aa22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 OR8H1Q8NGG4 311 aa22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 C16orf52Q8NHV5 167 aa22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 GFI1Q99684 422 aa22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 C20orf85Q9H1P6 137 aa22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 OR10A5Q9H207 317 aa22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 KLHL9Q9P2J3 617 aa22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 PRODH2Q9UF12 536 aa22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 U3KQ87 197 aa22.5■■□□□ 1.19
SYNGAP1-206ENST00000479510 CXCL3P19876 107 aa22.49■■□□□ 1.19
SYNGAP1-206ENST00000479510 BIKQ13323 160 aa22.49■■□□□ 1.19
SYNGAP1-206ENST00000479510 HTR4Q13639 388 aa22.49■■□□□ 1.19
SYNGAP1-206ENST00000479510 RNASE12Q5GAN4 147 aaKnown RBP22.49■■□□□ 1.19
SYNGAP1-206ENST00000479510 ESPNLQ6ZVH7 1005 aa22.49■■□□□ 1.19
SYNGAP1-206ENST00000479510 NUP54Q7Z3B4 507 aa22.49■■□□□ 1.19
SYNGAP1-206ENST00000479510 OR4C3Q8NH37 302 aa22.49■■□□□ 1.19
SYNGAP1-206ENST00000479510 MRPL38Q96DV4 380 aaKnown RBP22.49■■□□□ 1.19
SYNGAP1-206ENST00000479510 TCEAL2Q9H3H9 227 aaPredicted RBP22.49■■□□□ 1.19
SYNGAP1-206ENST00000479510 EXOSC3Q9NQT5 275 aaKnown RBP22.49■■□□□ 1.19
SYNGAP1-206ENST00000479510 ANKRD10Q9NXR5 420 aa22.49■■□□□ 1.19
SYNGAP1-206ENST00000479510 HCN3Q9P1Z3 774 aa22.49■■□□□ 1.19
SYNGAP1-206ENST00000479510 CLDN16Q9Y5I7 305 aa22.49■■□□□ 1.19
SYNGAP1-206ENST00000479510 ETV7Q9Y603 341 aa22.49■■□□□ 1.19
SYNGAP1-206ENST00000479510 IGKV1D-42A0A075B6H8 117 aa22.48■■□□□ 1.19
SYNGAP1-206ENST00000479510 LINC00862A6NCI5 91 aa22.48■■□□□ 1.19
SYNGAP1-206ENST00000479510 ELOA3DA6NLF2 546 aaPredicted RBP22.48■■□□□ 1.19
SYNGAP1-206ENST00000479510 NSA2O95478 260 aaKnown RBP22.48■■□□□ 1.19
SYNGAP1-206ENST00000479510 TXNDC12O95881 172 aa22.48■■□□□ 1.19
SYNGAP1-206ENST00000479510 IFNA16P05015 189 aa22.48■■□□□ 1.19
SYNGAP1-206ENST00000479510 CD14P08571 375 aa22.48■■□□□ 1.19
SYNGAP1-206ENST00000479510 CCR5P51681 352 aa22.48■■□□□ 1.19
SYNGAP1-206ENST00000479510 EIF2B5Q13144 721 aaKnown RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms