RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 TESMINQ9Y4I5 508 aa13.72□□□□□ -0.21
C9orf3-217ENST00000479161 LRBAP50851 2863 aa13.71□□□□□ -0.21
C9orf3-217ENST00000479161 SH3D21A4FU49 640 aa13.71□□□□□ -0.21
C9orf3-217ENST00000479161 MRPL33O75394 65 aaKnown RBP13.71□□□□□ -0.21
C9orf3-217ENST00000479161 CTAG2O75638 210 aa13.71□□□□□ -0.21
C9orf3-217ENST00000479161 AKR7A3O95154 331 aa13.71□□□□□ -0.21
C9orf3-217ENST00000479161 THY1P04216 161 aa13.71□□□□□ -0.21
C9orf3-217ENST00000479161 COX5AP20674 150 aa13.71□□□□□ -0.21
C9orf3-217ENST00000479161 IFNA8P32881 189 aa13.71□□□□□ -0.21
C9orf3-217ENST00000479161 CPOXP36551 454 aa13.71□□□□□ -0.21
C9orf3-217ENST00000479161 RPS5P46782 204 aaKnown RBP13.71□□□□□ -0.21
C9orf3-217ENST00000479161 TLE4Q04727 773 aa13.71□□□□□ -0.21
C9orf3-217ENST00000479161 ITGADQ13349 1161 aa13.71□□□□□ -0.21
C9orf3-217ENST00000479161 FBXW9Q5XUX1 488 aa13.71□□□□□ -0.21
C9orf3-217ENST00000479161 H1FNTQ75WM6 255 aaPredicted RBP13.71□□□□□ -0.21
C9orf3-217ENST00000479161 STEAP2Q8NFT2 490 aa13.71□□□□□ -0.21
C9orf3-217ENST00000479161 BCAS4Q8TDM0 211 aa13.71□□□□□ -0.21
C9orf3-217ENST00000479161 GEMIN6Q8WXD5 167 aaKnown RBP13.71□□□□□ -0.21
C9orf3-217ENST00000479161 POP5Q969H6 163 aaKnown RBP13.71□□□□□ -0.21
C9orf3-217ENST00000479161 BOD1Q96IK1 185 aa13.71□□□□□ -0.21
C9orf3-217ENST00000479161 DCAF13Q9NV06 445 aaKnown RBP13.71□□□□□ -0.21
C9orf3-217ENST00000479161 MRPL39Q9NYK5 338 aaKnown RBP13.71□□□□□ -0.21
C9orf3-217ENST00000479161 ZNF226Q9NYT6 803 aa13.71□□□□□ -0.21
C9orf3-217ENST00000479161 ADA2Q9NZK5 511 aa13.71□□□□□ -0.21
C9orf3-217ENST00000479161 MALT1Q9UDY8 824 aa13.71□□□□□ -0.21
C9orf3-217ENST00000479161 CPSF4LA6NMK7 179 aaKnown RBP13.7□□□□□ -0.22
C9orf3-217ENST00000479161 A6NNC1 897 aa13.7□□□□□ -0.22
C9orf3-217ENST00000479161 RAMP1O60894 148 aa13.7□□□□□ -0.22
C9orf3-217ENST00000479161 GMNNO75496 209 aa13.7□□□□□ -0.22
C9orf3-217ENST00000479161 GTF2E2P29084 291 aaKnown RBP13.7□□□□□ -0.22
C9orf3-217ENST00000479161 CCKARP32238 428 aa13.7□□□□□ -0.22
C9orf3-217ENST00000479161 ST3GAL3Q11203 375 aa13.7□□□□□ -0.22
C9orf3-217ENST00000479161 SFRP5Q5T4F7 317 aa13.7□□□□□ -0.22
C9orf3-217ENST00000479161 GLYATQ6IB77 296 aa13.7□□□□□ -0.22
C9orf3-217ENST00000479161 TTC33Q6PID6 262 aaPredicted RBP13.7□□□□□ -0.22
C9orf3-217ENST00000479161 CREB3L2Q70SY1 520 aa13.7□□□□□ -0.22
C9orf3-217ENST00000479161 TSPYL5Q86VY4 417 aaPredicted RBP13.7□□□□□ -0.22
C9orf3-217ENST00000479161 P2RY8Q86VZ1 359 aa13.7□□□□□ -0.22
C9orf3-217ENST00000479161 ZNF100Q8IYN0 542 aa13.7□□□□□ -0.22
C9orf3-217ENST00000479161 ZIC4Q8N9L1 334 aa13.7□□□□□ -0.22
C9orf3-217ENST00000479161 ANKK1Q8NFD2 765 aa13.7□□□□□ -0.22
C9orf3-217ENST00000479161 OR9K2Q8NGE7 335 aa13.7□□□□□ -0.22
C9orf3-217ENST00000479161 VANGL1Q8TAA9 524 aaPredicted RBP13.7□□□□□ -0.22
C9orf3-217ENST00000479161 LIPHQ8WWY8 451 aa13.7□□□□□ -0.22
C9orf3-217ENST00000479161 APH1AQ96BI3 265 aa13.7□□□□□ -0.22
C9orf3-217ENST00000479161 PRRC1Q96M27 445 aa13.7□□□□□ -0.22
C9orf3-217ENST00000479161 OXGR1Q96P68 337 aa13.7□□□□□ -0.22
C9orf3-217ENST00000479161 PRSS27Q9BQR3 290 aa13.7□□□□□ -0.22
C9orf3-217ENST00000479161 KLHL4Q9C0H6 718 aa13.7□□□□□ -0.22
C9orf3-217ENST00000479161 C12orf49Q9H741 205 aa13.7□□□□□ -0.22
C9orf3-217ENST00000479161 MAGEL2Q9UJ55 1249 aa13.7□□□□□ -0.22
C9orf3-217ENST00000479161 RIMS3Q9UJD0 308 aa13.7□□□□□ -0.22
C9orf3-217ENST00000479161 SAMD4AQ9UPU9 718 aaKnown RBP13.7□□□□□ -0.22
C9orf3-217ENST00000479161 RCE1Q9Y256 329 aa13.7□□□□□ -0.22
C9orf3-217ENST00000479161 PRR14LQ5THK1 2151 aa13.7□□□□□ -0.22
C9orf3-217ENST00000479161 ANKRD17O75179 2603 aaKnown RBP13.69□□□□□ -0.22
C9orf3-217ENST00000479161 CASKO14936 926 aa13.69□□□□□ -0.22
C9orf3-217ENST00000479161 BGLAPP02818 100 aa13.69□□□□□ -0.22
C9orf3-217ENST00000479161 IFNW1P05000 195 aa13.69□□□□□ -0.22
C9orf3-217ENST00000479161 T-ENOLP0DO92 83 aa13.69□□□□□ -0.22
C9orf3-217ENST00000479161 CRYGSP22914 178 aa13.69□□□□□ -0.22
C9orf3-217ENST00000479161 NTF4P34130 210 aa13.69□□□□□ -0.22
C9orf3-217ENST00000479161 TAS2R41P59536 307 aa13.69□□□□□ -0.22
C9orf3-217ENST00000479161 SLC25A3Q00325 362 aa13.69□□□□□ -0.22
C9orf3-217ENST00000479161 IFI44LQ53G44 452 aa13.69□□□□□ -0.22
C9orf3-217ENST00000479161 POMGNT2Q8NAT1 580 aa13.69□□□□□ -0.22
C9orf3-217ENST00000479161 LINC01560Q8TB33 94 aa13.69□□□□□ -0.22
C9orf3-217ENST00000479161 TPD52L3Q96J77 140 aa13.69□□□□□ -0.22
C9orf3-217ENST00000479161 WFIKKN1Q96NZ8 548 aa13.69□□□□□ -0.22
C9orf3-217ENST00000479161 CDRT15Q96T59 188 aa13.69□□□□□ -0.22
C9orf3-217ENST00000479161 MUC13Q9H3R2 512 aa13.69□□□□□ -0.22
C9orf3-217ENST00000479161 ANKRD19PQ9H560 264 aa13.69□□□□□ -0.22
C9orf3-217ENST00000479161 FKRPQ9H9S5 495 aa13.69□□□□□ -0.22
C9orf3-217ENST00000479161 RASSF1Q9NS23 344 aa13.69□□□□□ -0.22
C9orf3-217ENST00000479161 SLC7A7Q9UM01 511 aa13.69□□□□□ -0.22
C9orf3-217ENST00000479161 A4GNTQ9UNA3 340 aa13.69□□□□□ -0.22
C9orf3-217ENST00000479161 CREBBPQ92793 2442 aa13.69□□□□□ -0.22
C9orf3-217ENST00000479161 B2RBV5 119 aa13.68□□□□□ -0.22
C9orf3-217ENST00000479161 PDLIM1O00151 329 aa13.68□□□□□ -0.22
C9orf3-217ENST00000479161 SERPINA1P01009 418 aa13.68□□□□□ -0.22
C9orf3-217ENST00000479161 MT-ND1P03886 318 aa13.68□□□□□ -0.22
C9orf3-217ENST00000479161 ZNF43P17038 809 aa13.68□□□□□ -0.22
C9orf3-217ENST00000479161 PAX7P23759 505 aa13.68□□□□□ -0.22
C9orf3-217ENST00000479161 GRPRP30550 384 aa13.68□□□□□ -0.22
C9orf3-217ENST00000479161 OR1E2P47887 323 aa13.68□□□□□ -0.22
C9orf3-217ENST00000479161 ZP4Q12836 540 aa13.68□□□□□ -0.22
C9orf3-217ENST00000479161 WDR88Q6ZMY6 472 aa13.68□□□□□ -0.22
C9orf3-217ENST00000479161 TRPM8Q7Z2W7 1104 aa13.68□□□□□ -0.22
C9orf3-217ENST00000479161 PXKQ7Z7A4 578 aa13.68□□□□□ -0.22
C9orf3-217ENST00000479161 EPHX4Q8IUS5 362 aa13.68□□□□□ -0.22
C9orf3-217ENST00000479161 DEFB107AQ8IZN7 70 aa13.68□□□□□ -0.22
C9orf3-217ENST00000479161 OFCC1Q8IZS5 231 aa13.68□□□□□ -0.22
C9orf3-217ENST00000479161 HSD17B8Q92506 261 aa13.68□□□□□ -0.22
C9orf3-217ENST00000479161 FAM162AQ96A26 154 aa13.68□□□□□ -0.22
C9orf3-217ENST00000479161 SLC25A36Q96CQ1 311 aa13.68□□□□□ -0.22
C9orf3-217ENST00000479161 ASPNQ9BXN1 380 aa13.68□□□□□ -0.22
C9orf3-217ENST00000479161 LINC00470Q9BZP3 86 aa13.68□□□□□ -0.22
C9orf3-217ENST00000479161 AMBRA1Q9C0C7 1298 aa13.68□□□□□ -0.22
C9orf3-217ENST00000479161 ASB6Q9NWX5 421 aa13.68□□□□□ -0.22
C9orf3-217ENST00000479161 GMPR2Q9P2T1 348 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms