RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 ESPNLQ6ZVH7 1005 aa11.73□□□□□ -0.53
CHD3-210ENST00000479080 RRM2BQ7LG56 351 aa11.73□□□□□ -0.53
CHD3-210ENST00000479080 ADGRE4PQ86SQ3 457 aa11.73□□□□□ -0.53
CHD3-210ENST00000479080 CCDC71Q8IV32 467 aaPredicted RBP11.73□□□□□ -0.53
CHD3-210ENST00000479080 IQCF1Q8N6M8 205 aa11.73□□□□□ -0.53
CHD3-210ENST00000479080 CLDN22Q8N7P3 220 aa11.73□□□□□ -0.53
CHD3-210ENST00000479080 TMEM99Q8N816 258 aa11.73□□□□□ -0.53
CHD3-210ENST00000479080 OR51A7Q8NH64 312 aa11.73□□□□□ -0.53
CHD3-210ENST00000479080 FAR1Q8WVX9 515 aa11.73□□□□□ -0.53
CHD3-210ENST00000479080 SDCCAG3Q96C92 435 aa11.73□□□□□ -0.53
CHD3-210ENST00000479080 DTNBP1Q96EV8 351 aa11.73□□□□□ -0.53
CHD3-210ENST00000479080 TUBA1CQ9BQE3 449 aa11.73□□□□□ -0.53
CHD3-210ENST00000479080 RASSF4Q9H2L5 321 aa11.73□□□□□ -0.53
CHD3-210ENST00000479080 OR52D1Q9H346 318 aa11.73□□□□□ -0.53
CHD3-210ENST00000479080 LDAHQ9H6V9 325 aa11.73□□□□□ -0.53
CHD3-210ENST00000479080 ALKBH4Q9NXW9 302 aa11.73□□□□□ -0.53
CHD3-210ENST00000479080 MRPL39Q9NYK5 338 aaKnown RBP11.73□□□□□ -0.53
CHD3-210ENST00000479080 KIF17Q9P2E2 1029 aa11.73□□□□□ -0.53
CHD3-210ENST00000479080 ING1Q9UK53 422 aaPredicted RBP11.73□□□□□ -0.53
CHD3-210ENST00000479080 TRAPPC4Q9Y296 219 aa11.73□□□□□ -0.53
CHD3-210ENST00000479080 CDH10Q9Y6N8 788 aa11.73□□□□□ -0.53
CHD3-210ENST00000479080 MPDZO75970 2070 aa11.72□□□□□ -0.53
CHD3-210ENST00000479080 HTR3EA5X5Y0 456 aa11.72□□□□□ -0.53
CHD3-210ENST00000479080 PLPP3O14495 311 aa11.72□□□□□ -0.53
CHD3-210ENST00000479080 MT-ATP6P00846 226 aa11.72□□□□□ -0.53
CHD3-210ENST00000479080 SAGP10523 405 aaPredicted RBP11.72□□□□□ -0.53
CHD3-210ENST00000479080 HLA-DOBP13765 273 aa11.72□□□□□ -0.53
CHD3-210ENST00000479080 ENPP1P22413 925 aa11.72□□□□□ -0.53
CHD3-210ENST00000479080 IFNGR2P38484 337 aa11.72□□□□□ -0.53
CHD3-210ENST00000479080 SLC9A3P48764 834 aa11.72□□□□□ -0.53
CHD3-210ENST00000479080 AGFG1P52594 562 aaKnown RBP11.72□□□□□ -0.53
CHD3-210ENST00000479080 CRISP1P54107 249 aa11.72□□□□□ -0.53
CHD3-210ENST00000479080 ADARB1P78563 741 aaKnown RBP11.72□□□□□ -0.53
CHD3-210ENST00000479080 IL1RL1Q01638 556 aa11.72□□□□□ -0.53
CHD3-210ENST00000479080 SRYQ05066 204 aa11.72□□□□□ -0.53
CHD3-210ENST00000479080 RPL18Q07020 188 aaKnown RBP11.72□□□□□ -0.53
CHD3-210ENST00000479080 ZBED5Q49AG3 693 aa11.72□□□□□ -0.53
CHD3-210ENST00000479080 TMEM236Q5W0B7 351 aa11.72□□□□□ -0.53
CHD3-210ENST00000479080 HBMQ6B0K9 141 aa11.72□□□□□ -0.53
CHD3-210ENST00000479080 ABLIM2Q6H8Q1 611 aa11.72□□□□□ -0.53
CHD3-210ENST00000479080 IGFN1Q86VF2 1251 aa11.72□□□□□ -0.53
CHD3-210ENST00000479080 CCDC103Q8IW40 242 aa11.72□□□□□ -0.53
CHD3-210ENST00000479080 KDM8Q8N371 416 aa11.72□□□□□ -0.53
CHD3-210ENST00000479080 C10orf53Q8N6V4 93 aa11.72□□□□□ -0.53
CHD3-210ENST00000479080 OR5J2Q8NH18 312 aa11.72□□□□□ -0.53
CHD3-210ENST00000479080 FANK1Q8TC84 345 aa11.72□□□□□ -0.53
CHD3-210ENST00000479080 DNAJC9Q8WXX5 260 aa11.72□□□□□ -0.53
CHD3-210ENST00000479080 OSTF1Q92882 214 aa11.72□□□□□ -0.53
CHD3-210ENST00000479080 SAMD8Q96LT4 415 aa11.72□□□□□ -0.53
CHD3-210ENST00000479080 TACO1Q9BSH4 297 aaKnown RBP11.72□□□□□ -0.53
CHD3-210ENST00000479080 GRIP2Q9C0E4 1043 aa11.72□□□□□ -0.53
CHD3-210ENST00000479080 RIBC2Q9H4K1 309 aa11.72□□□□□ -0.53
CHD3-210ENST00000479080 NANSQ9NR45 359 aa11.72□□□□□ -0.53
CHD3-210ENST00000479080 SMPD3Q9NY59 655 aaPredicted RBP11.72□□□□□ -0.53
CHD3-210ENST00000479080 IL20Q9NYY1 176 aa11.72□□□□□ -0.53
CHD3-210ENST00000479080 ZNF407Q9C0G0 2248 aa11.72□□□□□ -0.53
CHD3-210ENST00000479080 KIAA1549Q9HCM3 1950 aa11.71□□□□□ -0.53
CHD3-210ENST00000479080 AQP7P3A6NL99 342 aa11.71□□□□□ -0.53
CHD3-210ENST00000479080 ZAR1LA6NP61 321 aa11.71□□□□□ -0.53
CHD3-210ENST00000479080 NPIPA2E9PIF3 369 aa11.71□□□□□ -0.53
CHD3-210ENST00000479080 NPIPA3F8WFD2 350 aa11.71□□□□□ -0.53
CHD3-210ENST00000479080 M0R129 80 aa11.71□□□□□ -0.53
CHD3-210ENST00000479080 SULT2B1O00204 365 aa11.71□□□□□ -0.53
CHD3-210ENST00000479080 BHLHE40O14503 412 aa11.71□□□□□ -0.53
CHD3-210ENST00000479080 ATXN7O15265 892 aaPredicted RBP11.71□□□□□ -0.53
CHD3-210ENST00000479080 OR2T1O43869 369 aa11.71□□□□□ -0.53
CHD3-210ENST00000479080 GSTM3P21266 225 aa11.71□□□□□ -0.53
CHD3-210ENST00000479080 FKBP2P26885 142 aaKnown RBP11.71□□□□□ -0.53
CHD3-210ENST00000479080 EIF1AXP47813 144 aaKnown RBP11.71□□□□□ -0.53
CHD3-210ENST00000479080 ZP4Q12836 540 aa11.71□□□□□ -0.53
CHD3-210ENST00000479080 COX10Q12887 443 aa11.71□□□□□ -0.53
CHD3-210ENST00000479080 NPRL3Q12980 569 aa11.71□□□□□ -0.53
CHD3-210ENST00000479080 RFX4Q33E94 735 aa11.71□□□□□ -0.53
CHD3-210ENST00000479080 ACSM5Q6NUN0 579 aa11.71□□□□□ -0.53
CHD3-210ENST00000479080 SMARCD3Q6STE5 483 aa11.71□□□□□ -0.53
CHD3-210ENST00000479080 MAMDC2Q7Z304 686 aaPredicted RBP11.71□□□□□ -0.53
CHD3-210ENST00000479080 NANOGNBQ7Z5D8 188 aa11.71□□□□□ -0.53
CHD3-210ENST00000479080 OAFQ86UD1 273 aa11.71□□□□□ -0.53
CHD3-210ENST00000479080 SCAIQ8N9R8 606 aa11.71□□□□□ -0.53
CHD3-210ENST00000479080 ADPRHL1Q8NDY3 354 aa11.71□□□□□ -0.53
CHD3-210ENST00000479080 GPX7Q96SL4 187 aaPredicted RBP11.71□□□□□ -0.53
CHD3-210ENST00000479080 PITX2Q99697 317 aa11.71□□□□□ -0.53
CHD3-210ENST00000479080 EXO5Q9H790 373 aa11.71□□□□□ -0.53
CHD3-210ENST00000479080 CHST11Q9NPF2 352 aa11.71□□□□□ -0.53
CHD3-210ENST00000479080 KRCC1Q9NPI7 259 aaPredicted RBP11.71□□□□□ -0.53
CHD3-210ENST00000479080 FANCFQ9NPI8 374 aa11.71□□□□□ -0.53
CHD3-210ENST00000479080 C8orf4Q9NR00 106 aa11.71□□□□□ -0.53
CHD3-210ENST00000479080 PNPLA3Q9NST1 481 aa11.71□□□□□ -0.53
CHD3-210ENST00000479080 A0A1W2PNV4 684 aa11.7□□□□□ -0.54
CHD3-210ENST00000479080 GJE1A6NN92 205 aa11.7□□□□□ -0.54
CHD3-210ENST00000479080 ZNF716A6NP11 495 aa11.7□□□□□ -0.54
CHD3-210ENST00000479080 H0YJX3 145 aa11.7□□□□□ -0.54
CHD3-210ENST00000479080 TRAF3IP2O43734 574 aaPredicted RBP11.7□□□□□ -0.54
CHD3-210ENST00000479080 AQP8O94778 261 aa11.7□□□□□ -0.54
CHD3-210ENST00000479080 CLIC3O95833 236 aa11.7□□□□□ -0.54
CHD3-210ENST00000479080 SFTPCP11686 197 aa11.7□□□□□ -0.54
CHD3-210ENST00000479080 MLLT10P55197 1068 aa11.7□□□□□ -0.54
CHD3-210ENST00000479080 RAC3P60763 192 aa11.7□□□□□ -0.54
CHD3-210ENST00000479080 ESRRGP62508 458 aa11.7□□□□□ -0.54
CHD3-210ENST00000479080 SLC35A1P78382 337 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms