RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 C10orf53Q8N6V4 93 aa11.69□□□□□ -0.54
TOP3A-205ENST00000477508 ADPRHL1Q8NDY3 354 aa11.69□□□□□ -0.54
TOP3A-205ENST00000477508 TMEM239Q8WW34 195 aa11.69□□□□□ -0.54
TOP3A-205ENST00000477508 SLC25A36Q96CQ1 311 aa11.69□□□□□ -0.54
TOP3A-205ENST00000477508 CCDC124Q96CT7 223 aaKnown RBP11.69□□□□□ -0.54
TOP3A-205ENST00000477508 DNAJA3Q96EY1 480 aa11.69□□□□□ -0.54
TOP3A-205ENST00000477508 C7orf34Q96L11 122 aa11.69□□□□□ -0.54
TOP3A-205ENST00000477508 ZNF300Q96RE9 604 aaPredicted RBP11.69□□□□□ -0.54
TOP3A-205ENST00000477508 ZNF347Q96SE7 839 aa11.69□□□□□ -0.54
TOP3A-205ENST00000477508 ASPNQ9BXN1 380 aa11.69□□□□□ -0.54
TOP3A-205ENST00000477508 MAGIXQ9H6Y5 334 aa11.69□□□□□ -0.54
TOP3A-205ENST00000477508 IL1RAPQ9NPH3 570 aa11.69□□□□□ -0.54
TOP3A-205ENST00000477508 PARPBPQ9NWS1 579 aa11.69□□□□□ -0.54
TOP3A-205ENST00000477508 MRPL39Q9NYK5 338 aaKnown RBP11.69□□□□□ -0.54
TOP3A-205ENST00000477508 NDUFAF4Q9P032 175 aa11.69□□□□□ -0.54
TOP3A-205ENST00000477508 C6orf203Q9P0P8 240 aaPredicted RBP11.69□□□□□ -0.54
TOP3A-205ENST00000477508 CLEC4AQ9UMR7 237 aa11.69□□□□□ -0.54
TOP3A-205ENST00000477508 MED31Q9Y3C7 131 aa11.69□□□□□ -0.54
TOP3A-205ENST00000477508 LOC102725191A0A1B0GVB3 256 aa11.68□□□□□ -0.54
TOP3A-205ENST00000477508 NKX2-6A6NCS4 301 aa11.68□□□□□ -0.54
TOP3A-205ENST00000477508 AQP12BA6NM10 295 aa11.68□□□□□ -0.54
TOP3A-205ENST00000477508 ZNF716A6NP11 495 aa11.68□□□□□ -0.54
TOP3A-205ENST00000477508 AKR7A3O95154 331 aa11.68□□□□□ -0.54
TOP3A-205ENST00000477508 CGAP01215 116 aa11.68□□□□□ -0.54
TOP3A-205ENST00000477508 MT-ND1P03886 318 aa11.68□□□□□ -0.54
TOP3A-205ENST00000477508 MS4A2Q01362 244 aa11.68□□□□□ -0.54
TOP3A-205ENST00000477508 TFF3Q07654 80 aa11.68□□□□□ -0.54
TOP3A-205ENST00000477508 SLC17A1Q14916 467 aa11.68□□□□□ -0.54
TOP3A-205ENST00000477508 POU4F3Q15319 338 aa11.68□□□□□ -0.54
TOP3A-205ENST00000477508 VWA1Q6PCB0 445 aa11.68□□□□□ -0.54
TOP3A-205ENST00000477508 WDR88Q6ZMY6 472 aa11.68□□□□□ -0.54
TOP3A-205ENST00000477508 H1FNTQ75WM6 255 aaPredicted RBP11.68□□□□□ -0.54
TOP3A-205ENST00000477508 P3H2Q8IVL5 708 aa11.68□□□□□ -0.54
TOP3A-205ENST00000477508 CCDC103Q8IW40 242 aa11.68□□□□□ -0.54
TOP3A-205ENST00000477508 TUSC5Q8IXB3 177 aa11.68□□□□□ -0.54
TOP3A-205ENST00000477508 AQP12AQ8IXF9 295 aa11.68□□□□□ -0.54
TOP3A-205ENST00000477508 TMEM99Q8N816 258 aa11.68□□□□□ -0.54
TOP3A-205ENST00000477508 PIK3C3Q8NEB9 887 aa11.68□□□□□ -0.54
TOP3A-205ENST00000477508 CLPTM1LQ96KA5 538 aa11.68□□□□□ -0.54
TOP3A-205ENST00000477508 PIP5K1AQ99755 562 aa11.68□□□□□ -0.54
TOP3A-205ENST00000477508 TMUB1Q9BVT8 246 aa11.68□□□□□ -0.54
TOP3A-205ENST00000477508 RBM24Q9BX46 236 aaKnown RBP11.68□□□□□ -0.54
TOP3A-205ENST00000477508 LRMDAQ9H2I8 198 aa11.68□□□□□ -0.54
TOP3A-205ENST00000477508 FKRPQ9H9S5 495 aa11.68□□□□□ -0.54
TOP3A-205ENST00000477508 NMNAT1Q9HAN9 279 aaPredicted RBP11.68□□□□□ -0.54
TOP3A-205ENST00000477508 NANSQ9NR45 359 aa11.68□□□□□ -0.54
TOP3A-205ENST00000477508 ELOVL5Q9NYP7 299 aa11.68□□□□□ -0.54
TOP3A-205ENST00000477508 ING1Q9UK53 422 aaPredicted RBP11.68□□□□□ -0.54
TOP3A-205ENST00000477508 A0A1W2PRQ8 180 aa11.67□□□□□ -0.54
TOP3A-205ENST00000477508 M0R082 166 aa11.67□□□□□ -0.54
TOP3A-205ENST00000477508 ACOT8O14734 319 aa11.67□□□□□ -0.54
TOP3A-205ENST00000477508 FFAR1O14842 300 aa11.67□□□□□ -0.54
TOP3A-205ENST00000477508 PRSS23O95084 383 aa11.67□□□□□ -0.54
TOP3A-205ENST00000477508 CNOT4O95628 575 aaKnown RBP11.67□□□□□ -0.54
TOP3A-205ENST00000477508 BGLAPP02818 100 aa11.67□□□□□ -0.54
TOP3A-205ENST00000477508 SEMG1P04279 462 aa11.67□□□□□ -0.54
TOP3A-205ENST00000477508 HIST1H2ABP04908 130 aa11.67□□□□□ -0.54
TOP3A-205ENST00000477508 FABP3P05413 133 aa11.67□□□□□ -0.54
TOP3A-205ENST00000477508 H1F0P07305 194 aaKnown RBP11.67□□□□□ -0.54
TOP3A-205ENST00000477508 UMPSP11172 480 aa11.67□□□□□ -0.54
TOP3A-205ENST00000477508 NQO1P15559 274 aaKnown RBP11.67□□□□□ -0.54
TOP3A-205ENST00000477508 ATP6V1B2P21281 511 aa11.67□□□□□ -0.54
TOP3A-205ENST00000477508 GRPRP30550 384 aa11.67□□□□□ -0.54
TOP3A-205ENST00000477508 YAP1P46937 504 aaKnown RBP11.67□□□□□ -0.54
TOP3A-205ENST00000477508 VLDLRP98155 873 aa11.67□□□□□ -0.54
TOP3A-205ENST00000477508 SORDQ00796 357 aa11.67□□□□□ -0.54
TOP3A-205ENST00000477508 CHRNB3Q05901 458 aa11.67□□□□□ -0.54
TOP3A-205ENST00000477508 DGCR6Q14129 220 aa11.67□□□□□ -0.54
TOP3A-205ENST00000477508 ZNF74Q16587 644 aa11.67□□□□□ -0.54
TOP3A-205ENST00000477508 FAM98BQ52LJ0 330 aaKnown RBP11.67□□□□□ -0.54
TOP3A-205ENST00000477508 BEND4Q6ZU67 534 aa11.67□□□□□ -0.54
TOP3A-205ENST00000477508 HIST3H2AQ7L7L0 130 aa11.67□□□□□ -0.54
TOP3A-205ENST00000477508 RRM2BQ7LG56 351 aa11.67□□□□□ -0.54
TOP3A-205ENST00000477508 PIWIL3Q7Z3Z3 882 aaKnown RBP11.67□□□□□ -0.54
TOP3A-205ENST00000477508 LUZP2Q86TE4 346 aa11.67□□□□□ -0.54
TOP3A-205ENST00000477508 NKAIN4Q8IVV8 208 aa11.67□□□□□ -0.54
TOP3A-205ENST00000477508 FAM86B1Q8N7N1 296 aa11.67□□□□□ -0.54
TOP3A-205ENST00000477508 OR9K2Q8NGE7 335 aa11.67□□□□□ -0.54
TOP3A-205ENST00000477508 ZNF417Q8TAU3 575 aa11.67□□□□□ -0.54
TOP3A-205ENST00000477508 ACOT11Q8WXI4 607 aaPredicted RBP11.67□□□□□ -0.54
TOP3A-205ENST00000477508 HIST1H2ACQ93077 130 aa11.67□□□□□ -0.54
TOP3A-205ENST00000477508 OXGR1Q96P68 337 aa11.67□□□□□ -0.54
TOP3A-205ENST00000477508 ZNF587Q96SQ5 575 aaPredicted RBP11.67□□□□□ -0.54
TOP3A-205ENST00000477508 SPOCK3Q9BQ16 436 aa11.67□□□□□ -0.54
TOP3A-205ENST00000477508 CADM1Q9BY67 442 aaKnown RBP11.67□□□□□ -0.54
TOP3A-205ENST00000477508 ZNF229Q9UJW7 825 aa11.67□□□□□ -0.54
TOP3A-205ENST00000477508 NOSIPQ9Y314 301 aaKnown RBP11.67□□□□□ -0.54
TOP3A-205ENST00000477508 V9GYQ6 96 aa11.67□□□□□ -0.54
TOP3A-205ENST00000477508 NAV2Q8IVL1 2488 aa11.67□□□□□ -0.54
TOP3A-205ENST00000477508 HCFC1P51610 2035 aa11.66□□□□□ -0.54
TOP3A-205ENST00000477508 TCRBV5S2A0A599 114 aa11.66□□□□□ -0.54
TOP3A-205ENST00000477508 ZNF814B7Z6K7 855 aa11.66□□□□□ -0.54
TOP3A-205ENST00000477508 J3KTA2 159 aa11.66□□□□□ -0.54
TOP3A-205ENST00000477508 hCG_2039718K7EN88 272 aa11.66□□□□□ -0.54
TOP3A-205ENST00000477508 MRPL33O75394 65 aaKnown RBP11.66□□□□□ -0.54
TOP3A-205ENST00000477508 OR6A2O95222 327 aa11.66□□□□□ -0.54
TOP3A-205ENST00000477508 ZNF43P17038 809 aa11.66□□□□□ -0.54
TOP3A-205ENST00000477508 KLK2P20151 261 aa11.66□□□□□ -0.54
TOP3A-205ENST00000477508 UQCRC1P31930 480 aa11.66□□□□□ -0.54
TOP3A-205ENST00000477508 OR3A2P47893 321 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms