RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 KIR3DX1Q9H7L2 352 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 TRIM45Q9H8W5 580 aaPredicted RBP2.55□□□□□ -2
HMGN4-202ENST00000477243 NHEJ1Q9H9Q4 299 aaPredicted RBP2.55□□□□□ -2
HMGN4-202ENST00000477243 UGT1A10Q9HAW8 530 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 NTN4Q9HB63 628 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 ANKHQ9HCJ1 492 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 TPSG1Q9NRR2 321 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 IMP3Q9NV31 184 aaKnown RBP2.55□□□□□ -2
HMGN4-202ENST00000477243 AURKAIP1Q9NWT8 199 aaPredicted RBP2.55□□□□□ -2
HMGN4-202ENST00000477243 C2orf42Q9NWW7 574 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 DUS2Q9NX74 493 aaKnown RBP2.55□□□□□ -2
HMGN4-202ENST00000477243 ELOVL2Q9NXB9 296 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 FAM53CQ9NYF3 392 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 IL36GQ9NZH8 169 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 DCDC2Q9UHG0 476 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 MRM2Q9UI43 246 aaKnown RBP2.55□□□□□ -2
HMGN4-202ENST00000477243 SIX4Q9UIU6 781 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 ANAPC7Q9UJX3 599 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 ZNF221Q9UK13 617 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 PILRBQ9UKJ0 227 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 MAN1B1Q9UKM7 699 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 POMT2Q9UKY4 750 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 RAB23Q9ULC3 237 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 SAMHD1Q9Y3Z3 626 aaKnown RBP2.55□□□□□ -2
HMGN4-202ENST00000477243 PCDHGB1Q9Y5G3 927 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 MMP24Q9Y5R2 645 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 ALG6Q9Y672 507 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 MXRA5Q9NR99 2828 aa2.55□□□□□ -2
HMGN4-202ENST00000477243 IFT172Q9UG01 1749 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 CDHR2Q9BYE9 1310 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 TRBV9A0A0B4J1U6 114 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 A0A0J9YVX5 310 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 TEX13DA0A0J9YY54 714 aaPredicted RBP2.54□□□□□ -2
HMGN4-202ENST00000477243 KRTAP23-1A1A580 65 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 LILRA5A6NI73 299 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 UNC119BA6NIH7 251 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 NKX6-3A6NJ46 265 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 C2CD4BA6NLJ0 364 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 GOLGA8JA6NMD2 632 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 OR5K4A6NMS3 321 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 DBX1A6NMT0 343 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 LINC00473A8K010 186 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 ERI2A8K979 691 aaKnown RBP2.54□□□□□ -2
HMGN4-202ENST00000477243 PP2D1A8MPX8 630 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 A8MX80 341 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 GOLGA8KD6RF30 607 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 LRRN3E7EW58 273 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 E9PQ18 207 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 F8VP50 259 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 H3BMH7 237 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 TMEM178BH3BS89 294 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 DYNC1I1O14576 645 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 TOX3O15405 576 aaPredicted RBP2.54□□□□□ -2
HMGN4-202ENST00000477243 INSIG1O15503 277 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 CHST1O43916 411 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 SRPX2O60687 465 aaPredicted RBP2.54□□□□□ -2
HMGN4-202ENST00000477243 ENTPD5O75356 428 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 SH3BGRLO75368 114 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 GAGE7O76087 117 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 TOXO94900 526 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 SEMA3DO95025 777 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 DIRAS1O95057 198 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 SCELO95171 688 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 LDOC1O95751 146 aaPredicted RBP2.54□□□□□ -2
HMGN4-202ENST00000477243 AP2A1O95782 977 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 WNT11O96014 354 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 GPIP06744 558 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 GAGE12FP0CL80 117 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 GAGE12GP0CL81 117 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 GAGE12IP0CL82 117 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 PET100P0DJ07 73 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 ACP2P11117 423 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 NR2C1P13056 603 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 GATA1P15976 413 aaPredicted RBP2.54□□□□□ -2
HMGN4-202ENST00000477243 ZNF43P17038 809 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 GM2AP17900 193 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 PGAM1P18669 254 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 COMTP21964 271 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 GNLYP22749 145 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 LHCGRP22888 699 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 HTR2CP28335 458 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 GCAP28676 217 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 HMGCLP35914 325 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 ACTR1BP42025 376 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 DNASE1L1P49184 302 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 ATP5J2P56134 94 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 TMEM50BP56557 158 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 HERV-K104P61576 105 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 POLR2GP62487 172 aaKnown RBP eCLIP2.54□□□□□ -2
HMGN4-202ENST00000477243 VSNL1P62760 191 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 RPL10AP62906 217 aaKnown RBP2.54□□□□□ -2
HMGN4-202ENST00000477243 ID2Q02363 134 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 GUCY2DQ02846 1103 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 ZNF33AQ06730 810 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 RBBP4Q09028 425 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 RIPPLY1Q0D2K3 151 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 GAGE1Q13065 139 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 GAGE4Q13068 117 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 MFAP5Q13361 173 aa2.54□□□□□ -2
HMGN4-202ENST00000477243 SF3B4Q15427 424 aaKnown RBP eCLIP2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms