RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 A0A087WUJ7 227 aa18.63■□□□□ 0.57
LIME1-204ENST00000476183 PPA1Q15181 289 aa18.63■□□□□ 0.57
LIME1-204ENST00000476183 TIMM23BQ5SRD1 257 aa18.63■□□□□ 0.57
LIME1-204ENST00000476183 CREB3L2Q70SY1 520 aa18.63■□□□□ 0.57
LIME1-204ENST00000476183 AAED1Q7RTV5 226 aa18.63■□□□□ 0.57
LIME1-204ENST00000476183 PATL1Q86TB9 770 aaKnown RBP18.63■□□□□ 0.57
LIME1-204ENST00000476183 TGIF2LYQ8IUE0 185 aa18.63■□□□□ 0.57
LIME1-204ENST00000476183 RBM45Q8IUH3 476 aaKnown RBP18.63■□□□□ 0.57
LIME1-204ENST00000476183 EPHX4Q8IUS5 362 aa18.63■□□□□ 0.57
LIME1-204ENST00000476183 KDM8Q8N371 416 aa18.63■□□□□ 0.57
LIME1-204ENST00000476183 OR6T1Q8NGN1 323 aa18.63■□□□□ 0.57
LIME1-204ENST00000476183 SLC47A1Q96FL8 570 aa18.63■□□□□ 0.57
LIME1-204ENST00000476183 TAS2R16Q9NYV7 291 aa18.63■□□□□ 0.57
LIME1-204ENST00000476183 NPAP1Q9NZP6 1156 aa18.63■□□□□ 0.57
LIME1-204ENST00000476183 USF3Q68DE3 2245 aa18.62■□□□□ 0.57
LIME1-204ENST00000476183 DPRXA6NFQ7 191 aa18.62■□□□□ 0.57
LIME1-204ENST00000476183 OR5H1A6NKK0 313 aa18.62■□□□□ 0.57
LIME1-204ENST00000476183 CCT8L1PA6NM43 557 aa18.62■□□□□ 0.57
LIME1-204ENST00000476183 VAMP5O95183 116 aa18.62■□□□□ 0.57
LIME1-204ENST00000476183 NPPAP01160 153 aa18.62■□□□□ 0.57
LIME1-204ENST00000476183 C8BP07358 591 aa18.62■□□□□ 0.57
LIME1-204ENST00000476183 PTNP21246 168 aa18.62■□□□□ 0.57
LIME1-204ENST00000476183 CDH12P55289 794 aa18.62■□□□□ 0.57
LIME1-204ENST00000476183 ADAM8P78325 824 aa18.62■□□□□ 0.57
LIME1-204ENST00000476183 GABRA6Q16445 453 aa18.62■□□□□ 0.57
LIME1-204ENST00000476183 C9orf135Q5VTT2 229 aa18.62■□□□□ 0.57
LIME1-204ENST00000476183 C20orf204Q6ZNR8 217 aa18.62■□□□□ 0.57
LIME1-204ENST00000476183 CCDC80Q76M96 950 aa18.62■□□□□ 0.57
LIME1-204ENST00000476183 RANBP3LQ86VV4 465 aaPredicted RBP18.62■□□□□ 0.57
LIME1-204ENST00000476183 TSPYL5Q86VY4 417 aaPredicted RBP18.62■□□□□ 0.57
LIME1-204ENST00000476183 KRTAP1-3Q8IUG1 177 aa18.62■□□□□ 0.57
LIME1-204ENST00000476183 POU5F2Q8N7G0 328 aa18.62■□□□□ 0.57
LIME1-204ENST00000476183 LILRB1Q8NHL6 650 aaPredicted RBP18.62■□□□□ 0.57
LIME1-204ENST00000476183 RNF217Q8TC41 542 aa18.62■□□□□ 0.57
LIME1-204ENST00000476183 ZNF583Q96ND8 569 aa18.62■□□□□ 0.57
LIME1-204ENST00000476183 MCHR1Q99705 422 aa18.62■□□□□ 0.57
LIME1-204ENST00000476183 CCL19Q99731 98 aa18.62■□□□□ 0.57
LIME1-204ENST00000476183 SH3GL1Q99961 368 aa18.62■□□□□ 0.57
LIME1-204ENST00000476183 ECSITQ9BQ95 431 aa18.62■□□□□ 0.57
LIME1-204ENST00000476183 EVA1AQ9H8M9 152 aa18.62■□□□□ 0.57
LIME1-204ENST00000476183 UPB1Q9UBR1 384 aa18.62■□□□□ 0.57
LIME1-204ENST00000476183 RASD1Q9Y272 281 aa18.62■□□□□ 0.57
LIME1-204ENST00000476183 ALPK2Q86TB3 2170 aa18.62■□□□□ 0.57
LIME1-204ENST00000476183 TRAV36DV7A0A075B6V5 113 aa18.61■□□□□ 0.57
LIME1-204ENST00000476183 CIB4A0PJX0 185 aa18.61■□□□□ 0.57
LIME1-204ENST00000476183 M0R082 166 aa18.61■□□□□ 0.57
LIME1-204ENST00000476183 SLC22A2O15244 555 aa18.61■□□□□ 0.57
LIME1-204ENST00000476183 FMO6PO60774 539 aa18.61■□□□□ 0.57
LIME1-204ENST00000476183 GRPRP30550 384 aa18.61■□□□□ 0.57
LIME1-204ENST00000476183 SELENOPP49908 381 aa18.61■□□□□ 0.57
LIME1-204ENST00000476183 LTBQ06643 244 aa18.61■□□□□ 0.57
LIME1-204ENST00000476183 BSPH1Q075Z2 132 aa18.61■□□□□ 0.57
LIME1-204ENST00000476183 LGALS3BPQ08380 585 aa18.61■□□□□ 0.57
LIME1-204ENST00000476183 FAM69AQ5T7M9 428 aa18.61■□□□□ 0.57
LIME1-204ENST00000476183 INTS11Q5TA45 600 aaKnown RBP18.61■□□□□ 0.57
LIME1-204ENST00000476183 C5orf46Q6UWT4 87 aa18.61■□□□□ 0.57
LIME1-204ENST00000476183 P2RY8Q86VZ1 359 aa18.61■□□□□ 0.57
LIME1-204ENST00000476183 ZNF417Q8TAU3 575 aa18.61■□□□□ 0.57
LIME1-204ENST00000476183 IGFBPL1Q8WX77 278 aa18.61■□□□□ 0.57
LIME1-204ENST00000476183 AKAP1Q92667 903 aaKnown RBP eCLIP18.61■□□□□ 0.57
LIME1-204ENST00000476183 NEUROG1Q92886 237 aa18.61■□□□□ 0.57
LIME1-204ENST00000476183 RCN3Q96D15 328 aa18.61■□□□□ 0.57
LIME1-204ENST00000476183 MUCL1Q96DR8 90 aa18.61■□□□□ 0.57
LIME1-204ENST00000476183 MUS81Q96NY9 551 aa18.61■□□□□ 0.57
LIME1-204ENST00000476183 ZNF587Q96SQ5 575 aaPredicted RBP18.61■□□□□ 0.57
LIME1-204ENST00000476183 PIP5K1AQ99755 562 aa18.61■□□□□ 0.57
LIME1-204ENST00000476183 TMUB1Q9BVT8 246 aa18.61■□□□□ 0.57
LIME1-204ENST00000476183 AMBRA1Q9C0C7 1298 aa18.61■□□□□ 0.57
LIME1-204ENST00000476183 SLCO5A1Q9H2Y9 848 aa18.61■□□□□ 0.57
LIME1-204ENST00000476183 ESRP2Q9H6T0 727 aaKnown RBP18.61■□□□□ 0.57
LIME1-204ENST00000476183 NGBQ9NPG2 151 aa18.61■□□□□ 0.57
LIME1-204ENST00000476183 B3GAT1Q9P2W7 334 aa18.61■□□□□ 0.57
LIME1-204ENST00000476183 RNF115Q9Y4L5 304 aa18.61■□□□□ 0.57
LIME1-204ENST00000476183 SLC25A15Q9Y619 301 aa18.61■□□□□ 0.57
LIME1-204ENST00000476183 PLCE1Q9P212 2302 aa18.61■□□□□ 0.57
LIME1-204ENST00000476183 A0A1W2PR80 420 aa18.6■□□□□ 0.57
LIME1-204ENST00000476183 HS3ST1O14792 307 aa18.6■□□□□ 0.57
LIME1-204ENST00000476183 CLOCKO15516 846 aa18.6■□□□□ 0.57
LIME1-204ENST00000476183 OR2T1O43869 369 aa18.6■□□□□ 0.57
LIME1-204ENST00000476183 LYPD3O95274 346 aa18.6■□□□□ 0.57
LIME1-204ENST00000476183 THY1P04216 161 aa18.6■□□□□ 0.57
LIME1-204ENST00000476183 CD3EP07766 207 aa18.6■□□□□ 0.57
LIME1-204ENST00000476183 CBLP22681 906 aa18.6■□□□□ 0.57
LIME1-204ENST00000476183 HOXC12P31275 282 aa18.6■□□□□ 0.57
LIME1-204ENST00000476183 PCYOX1LQ8NBM8 494 aa18.6■□□□□ 0.57
LIME1-204ENST00000476183 WFDC11Q8NEX6 87 aa18.6■□□□□ 0.57
LIME1-204ENST00000476183 OR52N5Q8NH56 324 aa18.6■□□□□ 0.57
LIME1-204ENST00000476183 VANGL1Q8TAA9 524 aaPredicted RBP18.6■□□□□ 0.57
LIME1-204ENST00000476183 PIGTQ969N2 578 aa18.6■□□□□ 0.57
LIME1-204ENST00000476183 GID8Q9NWU2 228 aa18.6■□□□□ 0.57
LIME1-204ENST00000476183 SELENONQ9NZV5 590 aa18.6■□□□□ 0.57
LIME1-204ENST00000476183 CPSF4LA6NMK7 179 aaKnown RBP18.59■□□□□ 0.57
LIME1-204ENST00000476183 AIM2O14862 343 aa18.59■□□□□ 0.57
LIME1-204ENST00000476183 BGLAPP02818 100 aa18.59■□□□□ 0.57
LIME1-204ENST00000476183 GTF2E2P29084 291 aaKnown RBP18.59■□□□□ 0.57
LIME1-204ENST00000476183 FOXD4Q12950 439 aaPredicted RBP18.59■□□□□ 0.57
LIME1-204ENST00000476183 ENTPD8Q5MY95 495 aa18.59■□□□□ 0.57
LIME1-204ENST00000476183 SWT1Q5T5J6 900 aaKnown RBP18.59■□□□□ 0.57
LIME1-204ENST00000476183 ADAM5Q6NVV9 412 aa18.59■□□□□ 0.57
LIME1-204ENST00000476183 ZNF613Q6PF04 617 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms